Personal profile

Research interests

Our laboratory is interested in the origins of pediatric inborn errors of immunity and immune dysregulation. We use genomic sequencing to identify genetic causes of pediatric disease and work to better understand these diseases using in vitro and in vivo models. Our discoveries have led to the identification and characterization of new pediatric diseases including STAT3 gain-of-function and TLR8 gain-of-function. We also have a special interest in study natural killer (NK) cells, innate immune lymphocytes that produce cytokines and can kill target cells. NK cells are important for the early control of viral infection and also play a role in tumor immunosurveillance.

Clinical interests

rheumatology, immunodeficiency, dermatomyositis, systemic lupus erythematosus

Mentoring

The Cooper lab is committed to fostering a diverse and inclusive research environment for all trainees and staff. We appreciate that bringing together different voices is important for advancing science.

Keywords

  • COVID-19

Available to Mentor:

  • PhD/MSTP Students

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Collaborations and top research areas from the last five years

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  • A human STAT3 gain-of-function variant drives local Th17 dysregulation and skin inflammation in mice

    Toth, K. A., Schmitt, E. G., Kolicheski, A., Greenberg, Z. J., Levendosky, E., Saucier, N., Trammel, K., Oikonomou, V., Lionakis, M. S., Klechevsky, E., Kim, B. S., Schuettpelz, L. G., Saligrama, N. & Cooper, M. A., Aug 5 2024, In: Journal of Experimental Medicine. 221, 8, e20232091.

    Research output: Contribution to journalArticlepeer-review

    3 Scopus citations
  • Case report: Deep sequencing and long-read genome sequencing refine prior genetic analyses in families with apparent gonadal mosaicism in PIK3CD-related activated PI3K delta syndrome

    Orellana, H., Yan, J., Paul, A., Tokita, M., Ding, Y., Ghosh, R., Lewis, K. L., Davis, J., Jamal, L., Jodarski, C., Similuk, M., Saucier, N., Zhu, Z., Wang, Y., Wu, S., Ruggieri, J., Su, H. C., Uzel, G., Nahas, S. & Cooper, M. & 1 others, Walkiewicz, M. A., 2024, In: Frontiers in immunology. 15, 1451212.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Correction: Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19 (Genome Medicine, (2023), 15, 1, (22), 10.1186/s13073-023-01173-8)

    French COVID Cohort Study Group, CoV-Contact Cohort, COVID-STORM Clinicians, COVID Clinicians, Orchestra Working Group, Amsterdam UMC Covid-19 Biobank, NIAID-USUHS COVID Study Group, COVID Human Genetic Effort, COVID Human Genetic Effort, COVIDeF Study Group, Matuozzo, D., Talouarn, E., Marchal, A., Zhang, P., Manry, J., Seeleuthner, Y., Zhang, Y., Bolze, A., Chaldebas, M. & Milisavljevic, B. & 190 others, Gervais, A., Bastard, P., Asano, T., Bizien, L., Barzaghi, F., Abolhassani, H., Tayoun, A. A., Aiuti, A., Darazam, I. A., Allende, L. M., Alonso-Arias, R., Arias, A. A., Aytekin, G., Bergman, P., Bondesan, S., Bryceson, Y. T., Bustos, I. G., Cabrera-Marante, O., Carcel, S., Carrera, P., Casari, G., Chaïbi, K., Colobran, R., Condino-Neto, A., Covill, L. E., Delmonte, O. M., Zein, L. E., Flores, C., Gregersen, P. K., Gut, M., Haerynck, F., Halwani, R., Hancerli, S., Hammarström, L., Hatipoğlu, N., Karbuz, A., Keles, S., Kyheng, C., Leon-Lopez, R., Franco, J. L., Mansouri, D., Martinez-Picado, J., Akcan, O. M., Migeotte, I., Morange, P. E., Morelle, G., Martin-Nalda, A., Novelli, G., Novelli, A., Ozcelik, T., Palabiyik, F., Pan-Hammarström, Q., de Diego, R. P., Planas-Serra, L., Pleguezuelo, D. E., Prando, C., Pujol, A., Reyes, L. F., Rivière, J. G., Rodriguez-Gallego, C., Rojas, J., Rovere-Querini, P., Schlüter, A., Shahrooei, M., Sobh, A., Soler-Palacin, P., Tandjaoui-Lambiotte, Y., Tipu, I., Tresoldi, C., Troya, J., van de Beek, D., Zatz, M., Zawadzki, P., Al-Muhsen, S. Z., Alosaimi, M. F., Alsohime, F. M., Baris-Feldman, H., Butte, M. J., Constantinescu, S. N., Cooper, M. A., Dalgard, C. L., Fellay, J., Heath, J. R., Lau, Y. L., Lifton, R. P., Maniatis, T., Mogensen, T. H., von Bernuth, H., Lermine, A., Vidaud, M., Boland, A., Deleuze, J. F., Nussbaum, R., Kahn-Kirby, A., Mentre, F., Tubiana, S., Gorochov, G., Tubach, F., Hausfater, P., Meyts, I., Zhang, S. Y., Puel, A., Notarangelo, L. D., Boisson-Dupuis, S., Su, H. C., Boisson, B., Jouanguy, E., Casanova, J. L., Zhang, Q., Abel, L., Cobat, A., Al-Muhsen, S., Al-Mulla, F., Anderson, M. S., Andreakos, E., Arias, A. A., Feldman, H. B., Belot, A., Biggs, C. M., Bogunovic, D., Bondarenko, A., Bousfiha, A. A., Brodin, P., Bryceson, Y., Bustamante, C. D., Chakravorty, S., Christodoulou, J., Desai, M., Drolet, B. A., Baghdadi, J. E., Espinosa-Padilla, S., Franco, J. L., Froidure, A., Hagin, D., Henrickson, S. E., Hsieh, E. W. Y., Husebye, E., Imai, K., Itan, Y., Jarvis, E. D., Karamitros, T., Kisand, K., Ku, C. L., Ling, Y., Lucas, C. L., Maródi, L., Milner, J. D., Mironska, K., Morio, T., Ng, L. F. P., O’Farrelly, C., Okada, S., Planas, A. M., Quintana-Murci, L., Renia, L., Resnick, I., Rodríguez-Gallego, C., Sancho-Shimizu, V., Sediva, A., Seppänen, M. R. J., Shcherbina, A., Slaby, O., Snow, A. L., Soler-Palacín, P., Spaan, A. N., Tancevski, I., Tangye, S. G., Ramaswamy, S., Turvey, S. E., Uddin, F., Uddin, M. J., Vinh, D. C., Bureau, S., Vacher, Y., Gysembergh-Houal, A., Demerville, L., Chachoua, A., Abad, S., Abassi, R., Abdellaoui, A., Abdelmalek, A., Abdoul, H., Abergel, H., Abeud, F., Abgrall, S., Abisror, N., Adechian, M., Aderdour, N., Admane, H. F. & Adnet, F., Dec 2024, In: Genome medicine. 16, 1, 6.

    Research output: Contribution to journalComment/debate

    Open Access
  • Heterozygous mutations in the C-terminal domain of COPA underlie a complex autoinflammatory syndrome

    Delafontaine, S., Iannuzzo, A., Bigley, T. M., Mylemans, B., Rana, R., Baatsen, P., Poli, M. C., Rymen, D., Jansen, K., Mekahli, D., Casteels, I., Cassiman, C., Demaerel, P., Lepelley, A., Frémond, M. L., Schrijvers, R., Bossuyt, X., Vints, K., Huybrechts, W. & Tacine, R. & 14 others, Willekens, K., Corveleyn, A., Boeckx, B., Baggio, M., Ehlers, L., Munck, S., Lambrechts, D., Voet, A., Moens, L., Bucciol, G., Cooper, M. A., Davis, C. M., Delon, J. & Meyts, I., Feb 15 2024, In: Journal of Clinical Investigation. 134, 4, e163604.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    5 Scopus citations
  • Higher COVID-19 pneumonia risk associated with anti-IFN-α than with anti-IFN-ω auto-Abs in children

    COVID Clinicians, GEN-COVID Study Group, COVID Human Genetic Effort, Bastard, P., Gervais, A., Taniguchi, M., Saare, L., Särekannu, K., Voyer, T. L., Philippot, Q., Rosain, J., Bizien, L., Asano, T., Garcia-Prat, M., Parra-Martínez, A., Migaud, M., Tsumura, M., Conti, F., Belot, A. & Rivière, J. G. & 183 others, Morio, T., Tanaka, J., Javouhey, E., Haerynck, F., Duvlis, S., Ozcelik, T., Keles, S., Tandjaoui-Lambiotte, Y., Escoda, S., Husain, M., Pan-Hammarström, Q., Hammarström, L., Ahlijah, G., Haidar, A. A., Soudee, C., Arseguel, V., Abolhassani, H., Sahanic, S., Tancevski, I., Nukui, Y., Hayakawa, S., Chrousos, G. P., Michos, A., Tatsi, E. B., Filippatos, F., Rodriguez-Palmero, A., Troya, J., Tipu, I., Meyts, I., Roussel, L., Ostrowski, S. R., Schidlowski, L., Prando, C., Condino-Neto, A., Cheikh, N., Bousfiha, A. A., Bakkouri, J. E., Peterson, P., Pujol, A., Lévy, R., Quartier, P., Vinh, D. C., Boisson, B., Béziat, V., Zhang, S. Y., Borghesi, A., Pession, A., Andreakos, E., Marr, N., Mentis, A. F. A., H.mogensen, T., Rodríguez-Gallego, C., Soler-Palacin, P., Colobran, R., Tillmann, V., Neven, B., Trouillet-Assant, S., Brodin, P., Abel, L., Jouanguy, E., Zhang, Q., Martinón-Torres, F., Salas, A., Gómez-Carballa, A., Gonzalez-Granado, L. I., Kisand, K., Okada, S., Puel, A., Cobat, A., Casanova, J. L., Aguilera-Albesa, S., Alkhater, S. A., Alkan, G., Castagnoli, R., Cyrus, C., Bozdemir, S. E., Emiroglu, M., Gulhan, B., Erdeniz, E. H., Hatipoglu, N., Bayhan, G. I., Jabandziev, P., Yuksek, S. K., Karbuz, A., Öz, Ş. K. T., Marseglia, G. L., Akcan, O. M., Kılıç, A. O., Parlakay, A. O., Papadaki, M., Slaba, K., Sevketoglu, E., Valencia-Ramos, J., Yahşi, A., Tuala, C., Urbieta, A. I. D., Esteban, B. D., Santalla, M. J. D., Pérez, C. F., Villaverde, J. F., Rodríguez, C. G., Allut, J. L. G., Vicente, L. G., Vázquez, E. G., Carballa, A. G., Rial, J. G., Barcala, F. J. G., Liñares, B. G., Iglesias, P. L., Massa, B. L., Fuentes, M. L., Franco, M. L., Lago, A. L., Cruz, D. N. D. L., Masid, E. N., Devesa, J. B. O., Seco, J. P., Núñez, M. P., Bernal, M. P. D. M., Freixo, H. P., Rodríguez, L. P., Pischedda, S., Romero, M. P., Reino, A. P., Hervella, G. M. P., Verdes, T. Q., Collazo, L. R., Casuso, P. R., García, S. R., Vázquez, S. R., Blanco, V. R., Calle, I. R., Velasco, C. R., Núñez, N. R., Sánchez, C. R. T., Paz, E. S., Orayyou, J. M. S., Villanueva, C. S., Fernández, S. S., Sanmartín, P. S., Muñiz, M. T., Pena, R. T., Castellano, M. T., Cuadrado, L. V., García, P. V., Iglesias, M. S. V., Lasheras, S. V., Ferreiro-Iglesias, R., Bastón-Rey, I., Calviño-Suárez, C., Aiuti, A., Al-Muhsen, S., Al-Mulla, F., Amara, A., Anderson, M. S., Arias, A. A., Arkin, L. M., Feldman, H. B., Biggs, C. M., Bogunovic, D., Bolze, A., Bondarenko, A., Bryceson, Y., Butte, M. J., Casari, G., Christodoulou, J., Constantinescu, S. N., Cooper, M. A., Dalgard, C. L., Desai, M., Drolet, B. A., Duval, X., Baghdadi, J. E., Eloy, P., Espinosa-Padilla, S., Fellay, J., Flores, C., Franco, J. L., Froidure, A., Gorochov, G., Gregersen, P. K., Grimbacher, B. & Hagin, D., Jan 1 2024, In: Journal of Experimental Medicine. 221, 2, e20231353.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    14 Scopus citations