Whole genome sequencing for genomics-guided investigations of Escherichia coli O157:H7 outbreaks

Keyphrases

• Bioinformatics 50%
• Closely Related Organisms 50%
• Clustering Comparison 50%
• Core Genome 100%
• Cost Efficiency 50%
• Diagnostic Monitoring 50%
• Diagnostic Study 50%
• Discriminatory Power 50%
• Escherichia Coli O157 100%
• Forensic Study 50%
• Genetic Epidemiology 50%
• Genetic Typing 100%
• Health Relevance 50%
• High Sample Throughput 50%
• High-resolution 50%
• Infected Individual 50%
• Intra-cluster 50%
• Large Plasmid 50%
• Long Term Evolution 50%
• Macrogenomics 50%
• Mobilome 100%
• Next-generation Sequencing 50%
• North America 50%
• Outbreak Investigation 100%
• Outbreak Strains 50%
• Phage 50%
• Phylogenetic Relatedness 50%
• Phylogenetic Signal 50%
• Phylogenomics 100%
• Polymorphism 50%
• Postgenomics 50%
• Public Health 50%
• Pulsed-field Gel Electrophoresis 50%
• Reference Strain 50%
• Same Patient 50%
• Sequence Type 100%
• Sequence-based 50%
• Single nucleotide Polymorphism Detection 50%
• Surveillance Studies 50%
• Variable number Tandem Repeat 50%
• Whole Genome 50%
• Whole Genome Sequencing 100%

Immunology and Microbiology

• Bacteriophage 50%
• Bioinformatics 50%
• Escherichia Coli O157:H7 100%
• Lineages 50%
• Next Generation Sequencing 50%
• Phylogenomics 100%
• Plasmid 50%
• Pulse Rate 50%
• Single Nucleotide Polymorphism 50%
• Tandem Repeat 50%
• Whole Genome Sequencing 100%

Biochemistry, Genetics and Molecular Biology

• Bacteriophage 33%
• Bioinformatics 33%
• Escherichia Coli O157 100%
• Gel Electrophoresis 33%
• Genomics 100%
• Next Generation Sequencing 33%
• Phylogenomics 66%
• Plasmid 33%
• Pulse Rate 33%
• Relatedness 33%
• Single-Nucleotide Polymorphism 33%
• Translating (Language) 33%
• Variable Number Tandem Repeat 33%
• Whole Genome Sequencing 100%