TY - JOUR
T1 - Use of reproducible research practices in public health
T2 - A survey of public health analysts
AU - Harris, Jenine K.
AU - Johnson, Kimberly J.
AU - Carothers, Bobbi J.
AU - Combs, Todd B.
AU - Luke, Douglas A.
AU - Wang, Xiaoyan
N1 - Publisher Copyright:
© 2018 Harris et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
PY - 2018/9
Y1 - 2018/9
N2 - Objective Use of reproducible research practices improves the quality of science and the speed of scientific development. We sought to understand use of reproducible research practices in public health and associated barriers and facilitators. Methods In late 2017, we surveyed members of the American Public Health Association Applied Public Health Statistics section and others; 247 of 278 who screened eligible answered the survey, and 209 answered every applicable question. The survey included questions about file management, code annotation and documentation, reproducibility of analyses, and facilitators and barriers of using reproducible practices. Results Just 14.4% of participants had shared code, data, or both. Many participants reported their data (33%) and code (43.2%) would be difficult for colleagues to find if they left their institution. Top reported barriers to using reproducible practices were data privacy (49.8%) and lack of time (41.7%). Participants suggested training (50.9%) and requirements by journals (44.4%) and funders (40.2%) to increase use of reproducible research practices. Conclusions Increasing use of reproducible research practices is important for public health and requires action from researchers, training programs, funders, and journals.
AB - Objective Use of reproducible research practices improves the quality of science and the speed of scientific development. We sought to understand use of reproducible research practices in public health and associated barriers and facilitators. Methods In late 2017, we surveyed members of the American Public Health Association Applied Public Health Statistics section and others; 247 of 278 who screened eligible answered the survey, and 209 answered every applicable question. The survey included questions about file management, code annotation and documentation, reproducibility of analyses, and facilitators and barriers of using reproducible practices. Results Just 14.4% of participants had shared code, data, or both. Many participants reported their data (33%) and code (43.2%) would be difficult for colleagues to find if they left their institution. Top reported barriers to using reproducible practices were data privacy (49.8%) and lack of time (41.7%). Participants suggested training (50.9%) and requirements by journals (44.4%) and funders (40.2%) to increase use of reproducible research practices. Conclusions Increasing use of reproducible research practices is important for public health and requires action from researchers, training programs, funders, and journals.
UR - https://www.scopus.com/pages/publications/85053127412
U2 - 10.1371/journal.pone.0202447
DO - 10.1371/journal.pone.0202447
M3 - Review article
C2 - 30208041
AN - SCOPUS:85053127412
SN - 1932-6203
VL - 13
JO - PloS one
JF - PloS one
IS - 9
M1 - e0202447
ER -