TY - JOUR
T1 - Update of ASRP
T2 - The Arabidopsis Small RNA Project database
AU - Backman, Tyler W.H.
AU - Sullivan, Christopher M.
AU - Cumbie, Jason S.
AU - Miller, Zachary A.
AU - Chapman, Elisabeth J.
AU - Fahlgren, Noah
AU - Givan, Scott A.
AU - Carrington, James C.
AU - Kasschau, Kristin D.
N1 - Funding Information:
We thank the members of the Carrington laboratory for their input into the development of the ASRP database and website. We thank Mark Dasenko for sequencing small RNA libraries and Amy Shatswell for laboratory management. The Arabidopsis small RNA project database is supported by a 2010 project grant from the National Science Foundation (MCB-0618433). Funding to pay the Open Access publication charges for this article was provided by the National Science Foundation (MCB-0618433).
PY - 2008/1
Y1 - 2008/1
N2 - Development of the Arabidopsis Small RNA Project (ASRP) Database, which provides information and tools for the analysis of microRNA, endogenous siRNA and other small RNA-related features, has been driven by the introduction of high-throughput sequencing technology. To accommodate the demands of increased data, numerous improvements and updates have been made to ASRP, including new ways to access data, more efficient algorithms for handling data, and increased integration with community-wide resources. New search and visualization tools have also been developed to improve access to small RNA classes and their targets. ASRP is publicly available through a web interface at http://asrp.cgrb.oregonstate.edu/db/.
AB - Development of the Arabidopsis Small RNA Project (ASRP) Database, which provides information and tools for the analysis of microRNA, endogenous siRNA and other small RNA-related features, has been driven by the introduction of high-throughput sequencing technology. To accommodate the demands of increased data, numerous improvements and updates have been made to ASRP, including new ways to access data, more efficient algorithms for handling data, and increased integration with community-wide resources. New search and visualization tools have also been developed to improve access to small RNA classes and their targets. ASRP is publicly available through a web interface at http://asrp.cgrb.oregonstate.edu/db/.
UR - http://www.scopus.com/inward/record.url?scp=38549110664&partnerID=8YFLogxK
U2 - 10.1093/nar/gkm997
DO - 10.1093/nar/gkm997
M3 - Article
C2 - 17999994
AN - SCOPUS:38549110664
SN - 0305-1048
VL - 36
SP - D982-D985
JO - Nucleic acids research
JF - Nucleic acids research
IS - SUPPL. 1
ER -