The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas

Quanxin Wang, Song Lin Ding, Yang Li, Josh Royall, David Feng, Phil Lesnar, Nile Graddis, Maitham Naeemi, Benjamin Facer, Anh Ho, Tim Dolbeare, Brandon Blanchard, Nick Dee, Wayne Wakeman, Karla E. Hirokawa, Aaron Szafer, Susan M. Sunkin, Seung Wook Oh, Amy Bernard, John W. PhillipsMichael Hawrylycz, Christof Koch, Hongkui Zeng, Julie A. Harris, Lydia Ng

Research output: Contribution to journalArticlepeer-review

611 Scopus citations

Abstract

The Allen Mouse Brain CCF is an openly accessible, cellular level resolution 3D reference atlas for analysis, visualization, and integration of multimodal and multiscale datasets.

Original languageEnglish
Pages (from-to)936-953.e20
JournalCell
Volume181
Issue number4
DOIs
StatePublished - May 14 2020

Keywords

  • 3D brain atlas
  • CCFv3
  • average mouse brain
  • brain anatomy
  • brain parcellation
  • common coordinate framework
  • fiber tracts
  • mouse cortex
  • reference atlas
  • transgenic mice

Fingerprint

Dive into the research topics of 'The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas'. Together they form a unique fingerprint.

Cite this