SP6 RNA polymerase efficiently synthesizes RNA from short double-stranded DNA templates

W. Tom Stump, Kathleen B. Hall

Research output: Contribution to journalArticlepeer-review

34 Scopus citations

Abstract

SP6 DNA-dependent RNA polymerase, like T7 RNA polymerase, can be used to synthesize RNA sequences from short DNA templates which contain the 18 base pair promoter region. Use of SP6 polymerase extends the range of possible 5' sequences of RNA products, since the preferred SP6 start site (of the RNA product) is 5'GAAGA, while T7 polymerase prefers 5'GGGAG. The SP6 start site can be advantageous in large-scale syntheses where high concentrations of RNA can lead to aggregation. Using the limited number of DNA templates described here, there appears to be a significant difference between the two enzymes: SP6 polymerase requires a complete duplex DNA substrate for efficient synthesis, unlike the T7 enzyme which works efficiently when only the 18 base promoter region is double-stranded. SP6 polymerase consistently produces higher yields of RNA than does T7 polymerase, and the reactions can be easily scaled up to produce milligram quantities of RNA.

Original languageEnglish
Pages (from-to)5480-5484
Number of pages5
JournalNucleic acids research
Volume21
Issue number23
DOIs
StatePublished - Nov 25 1993

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