Single-cell zeroth-order protein degradation enhances the robustness of synthetic oscillator

Wilson W. Wong, Tony Y. Tsai, James C. Liao

Research output: Contribution to journalArticlepeer-review

57 Scopus citations

Abstract

In Escherichia coli, protein degradation in synthetic circuits is commonly achieved by the ssrA-tagged degradation system. In this work, we show that the degradation kinetics for the green fluorescent protein fused with the native ssrA tag in each cell exhibits the zeroth-order limit of the Michaelis-Menten kinetics, rather than the commonly assumed first-order. When measured in a population, the wide distribution of protein levels in the cells distorts the true kinetics and results in a first-order protein degradation kinetics as a population average. Using the synthetic gene-metabolic oscillator constructed previously, we demonstrated theoretically that the zeroth-order kinetics significantly enlarges the parameter space for oscillation and thus enhances the robustness of the design under parametric uncertainty.

Original languageEnglish
Article number130
JournalMolecular Systems Biology
Volume3
DOIs
StatePublished - 2007

Keywords

  • Population heterogeneity
  • Protein degradation
  • Single-cell measurements
  • Synthetic biological circuits

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