TY - JOUR
T1 - ORegAnno 3.0
T2 - A community-driven resource for curated regulatory annotation
AU - Lesurf, Robert
AU - Cotto, Kelsy C.
AU - Wang, Grace
AU - Griffith, Malachi
AU - Kasaian, Katayoon
AU - Jones, Steven J.M.
AU - Montgomery, Stephen B.
AU - Griffith, Obi L.
N1 - Publisher Copyright:
© The Author(s) 2015.
PY - 2016
Y1 - 2016
N2 - The Open Regulatory Annotation database (ORe-gAnno) is a resource for curated regulatory annotation. It contains information about regulatory regions, transcription factor binding sites, RNA binding sites, regulatory variants, haplotypes, and other regulatory elements. ORegAnno differentiates itself from other regulatory resources by facilitating crowd-sourced interpretation and annotation of regulatory observations from the literature and highly curated resources. It contains a comprehensive annotation scheme that aims to describe both the elements and outcomes of regulatory events. Moreover, ORe-gAnno assembles these disparate data sources and annotations into a single, high quality catalogue of curated regulatory information. The current release is an update of the database previously featured in the NAR Database Issue, and now contains 1 948 307 records, across 18 species, with a combined coverage of 334 215 080 bp. Complete records, annotation, and other associated data are available for browsing and download at http://www.oreganno.org/.
AB - The Open Regulatory Annotation database (ORe-gAnno) is a resource for curated regulatory annotation. It contains information about regulatory regions, transcription factor binding sites, RNA binding sites, regulatory variants, haplotypes, and other regulatory elements. ORegAnno differentiates itself from other regulatory resources by facilitating crowd-sourced interpretation and annotation of regulatory observations from the literature and highly curated resources. It contains a comprehensive annotation scheme that aims to describe both the elements and outcomes of regulatory events. Moreover, ORe-gAnno assembles these disparate data sources and annotations into a single, high quality catalogue of curated regulatory information. The current release is an update of the database previously featured in the NAR Database Issue, and now contains 1 948 307 records, across 18 species, with a combined coverage of 334 215 080 bp. Complete records, annotation, and other associated data are available for browsing and download at http://www.oreganno.org/.
UR - http://www.scopus.com/inward/record.url?scp=84976866487&partnerID=8YFLogxK
U2 - 10.1093/nar/gkv1203
DO - 10.1093/nar/gkv1203
M3 - Article
C2 - 26578589
AN - SCOPUS:84976866487
SN - 0305-1048
VL - 44
SP - D126-D132
JO - Nucleic acids research
JF - Nucleic acids research
IS - D1
ER -