MapLinker: A software tool that aids physical map-linked whole genome shotgun assembly

Jian Xu; Jeffrey I. Gordon

doi:10.1093/bioinformatics/bti122

MapLinker: A software tool that aids physical map-linked whole genome shotgun assembly

Jian Xu, Jeffrey I. Gordon

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

Summary: MapLinker is an analysis tool, as well as a browsing interface, that facilitates integration of whole genome sequence assembly with a clone-based physical map. Using the locations of sequence markers on the physical map. MapLinker generates a tentative sequence map of the genome that serves to verify the map and to guide genome-wide finishing.

Original language	English
Pages (from-to)	1265-1266
Number of pages	2
Journal	Bioinformatics
Volume	21
Issue number	7
DOIs	https://doi.org/10.1093/bioinformatics/bti122
State	Published - Apr 1 2005

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title = "MapLinker: A software tool that aids physical map-linked whole genome shotgun assembly",

abstract = "Summary: MapLinker is an analysis tool, as well as a browsing interface, that facilitates integration of whole genome sequence assembly with a clone-based physical map. Using the locations of sequence markers on the physical map. MapLinker generates a tentative sequence map of the genome that serves to verify the map and to guide genome-wide finishing.",

author = "Jian Xu and Gordon, {Jeffrey I.}",

note = "Funding Information: This work was supported by grants from the NIH (DK30292) and NSF (0333284).",

year = "2005",

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AU - Xu, Jian

AU - Gordon, Jeffrey I.

N1 - Funding Information: This work was supported by grants from the NIH (DK30292) and NSF (0333284).

PY - 2005/4/1

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N2 - Summary: MapLinker is an analysis tool, as well as a browsing interface, that facilitates integration of whole genome sequence assembly with a clone-based physical map. Using the locations of sequence markers on the physical map. MapLinker generates a tentative sequence map of the genome that serves to verify the map and to guide genome-wide finishing.

AB - Summary: MapLinker is an analysis tool, as well as a browsing interface, that facilitates integration of whole genome sequence assembly with a clone-based physical map. Using the locations of sequence markers on the physical map. MapLinker generates a tentative sequence map of the genome that serves to verify the map and to guide genome-wide finishing.

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U2 - 10.1093/bioinformatics/bti122

DO - 10.1093/bioinformatics/bti122

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JO - Bioinformatics

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MapLinker: A software tool that aids physical map-linked whole genome shotgun assembly

Abstract

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