TY - JOUR
T1 - Joint phylogenetic estimation of geographic movements and biome shifts during the global diversification of Viburnum
AU - Landis, Michael J.
AU - Eaton, Deren A.R.
AU - Clement, Wendy L.
AU - Park, Brian
AU - Spriggs, Elizabeth L.
AU - Sweeney, Patrick W.
AU - Edwards, Erika J.
AU - Donoghue, Michael J.
N1 - Funding Information:
M. J. L. was supported by an NSF Postdoctoral Fellowship in Biology (DBI-1612153) and a Donnelley Postdoctoral Fellowship through the Yale Institute for Biospheric Studies. Our field studies have been funded in part through the Division of Botany of the Yale Peabody Museum of Natural History. We are especially grateful to generous support through a series of NSF awards: IOS-0842800, IOS-0843231, IOS-1256706, IOS-1257262, DEB-1145606, DEB-1026611, and, most recently, DEB-1557059 and DEB-1753504.
Publisher Copyright:
© The Author(s) 2020. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For permissions, please email: [email protected]
PY - 2021/1/1
Y1 - 2021/1/1
N2 - Phylogeny, molecular sequences, fossils, biogeography, and biome occupancy are all lines of evidence that reflect the singular evolutionary history of a clade, but they are most often studied separately, by first inferring a fossil-dated molecular phylogeny, then mapping on ancestral ranges and biomes inferred from extant species. Here we jointly model the evolution of biogeographic ranges, biome affinities, and molecular sequences, while incorporating fossils to estimate a dated phylogeny for all of the 163 extant species of the woody plant clade Viburnum (Adoxaceae) that we currently recognize in our ongoing worldwide monographic treatment of the group. Our analyses indicate that while the major Viburnum lineages evolved in the Eocene, the majority of extant species originated since the Miocene. Viburnum radiated first in Asia, in warm, broad-leaved evergreen (lucidophyllous) forests. Within Asia, we infer several early shifts into more tropical forests, and multiple shifts into forests that experience prolonged freezing. From Asia, we infer two early movements into the New World. These two lineages probably first occupied warm temperate forests and adapted later to spreading cold climates. One of these lineages (Porphyrotinus) occupied cloud forests and moved south through the mountains of the Neotropics. Several other movements into North America took place more recently, facilitated by prior adaptations to freezing in the Old World. We also infer four disjunctions between Asia and Europe: the Tinus lineage is the oldest and probably occupied warm forests when it spread, whereas the other three were more recent and in cold-adapted lineages. These results variously contradict published accounts, especially the view that Viburnum radiated initially in cold forests and, accordingly, maintained vessel elements with scalariform perforations. We explored how the location and biome assignments of fossils affected our inference of ancestral areas and biome states. Our results are sensitive to, but not entirely dependent upon, the inclusion of fossil biome data. It will be critical to take advantage of all available lines of evidence to decipher events in the distant past. The joint estimation approach developed here provides cautious hope even when fossil evidence is limited.
AB - Phylogeny, molecular sequences, fossils, biogeography, and biome occupancy are all lines of evidence that reflect the singular evolutionary history of a clade, but they are most often studied separately, by first inferring a fossil-dated molecular phylogeny, then mapping on ancestral ranges and biomes inferred from extant species. Here we jointly model the evolution of biogeographic ranges, biome affinities, and molecular sequences, while incorporating fossils to estimate a dated phylogeny for all of the 163 extant species of the woody plant clade Viburnum (Adoxaceae) that we currently recognize in our ongoing worldwide monographic treatment of the group. Our analyses indicate that while the major Viburnum lineages evolved in the Eocene, the majority of extant species originated since the Miocene. Viburnum radiated first in Asia, in warm, broad-leaved evergreen (lucidophyllous) forests. Within Asia, we infer several early shifts into more tropical forests, and multiple shifts into forests that experience prolonged freezing. From Asia, we infer two early movements into the New World. These two lineages probably first occupied warm temperate forests and adapted later to spreading cold climates. One of these lineages (Porphyrotinus) occupied cloud forests and moved south through the mountains of the Neotropics. Several other movements into North America took place more recently, facilitated by prior adaptations to freezing in the Old World. We also infer four disjunctions between Asia and Europe: the Tinus lineage is the oldest and probably occupied warm forests when it spread, whereas the other three were more recent and in cold-adapted lineages. These results variously contradict published accounts, especially the view that Viburnum radiated initially in cold forests and, accordingly, maintained vessel elements with scalariform perforations. We explored how the location and biome assignments of fossils affected our inference of ancestral areas and biome states. Our results are sensitive to, but not entirely dependent upon, the inclusion of fossil biome data. It will be critical to take advantage of all available lines of evidence to decipher events in the distant past. The joint estimation approach developed here provides cautious hope even when fossil evidence is limited.
KW - Biogeography
KW - Biome
KW - Combined evidence
KW - Fossil pollen
KW - Phylogeny
KW - Viburnum
UR - http://www.scopus.com/inward/record.url?scp=85098673439&partnerID=8YFLogxK
U2 - 10.1093/sysbio/syaa027
DO - 10.1093/sysbio/syaa027
M3 - Article
C2 - 32267945
AN - SCOPUS:85098673439
SN - 1063-5157
VL - 70
SP - 67
EP - 85
JO - Systematic Biology
JF - Systematic Biology
IS - 1
ER -