IoT cloud laboratory: Internet of Things architecture for cellular biology

David F. Parks; Kateryna Voitiuk; Jinghui Geng; Matthew A.T. Elliott; Matthew G. Keefe; Erik A. Jung; Ash Robbins; Pierre V. Baudin; Victoria T. Ly; Nico Hawthorne; Dylan Yong; Sebastian E. Sanso; Nick Rezaee; Jess L. Sevetson; Spencer T. Seiler; Rob Currie; Alex A. Pollen; Keith B. Hengen; Tomasz J. Nowakowski; Mohammed A. Mostajo-Radji; Sofie R. Salama; Mircea Teodorescu; David Haussler

doi:10.1016/j.iot.2022.100618

IoT cloud laboratory: Internet of Things architecture for cellular biology

David F. Parks, Kateryna Voitiuk, Jinghui Geng, Matthew A.T. Elliott, Matthew G. Keefe, Erik A. Jung, Ash Robbins, Pierre V. Baudin, Victoria T. Ly, Nico Hawthorne, Dylan Yong, Sebastian E. Sanso, Nick Rezaee, Jess L. Sevetson, Spencer T. Seiler, Rob Currie, Alex A. Pollen, Keith B. Hengen, Tomasz J. Nowakowski, Mohammed A. Mostajo-RadjiSofie R. Salama, Mircea Teodorescu, David Haussler

Research output: Contribution to journal › Article › peer-review

23 Scopus citations

Abstract

The Internet of Things (IoT) provides a simple framework to control online devices easily. IoT is now a commonplace tool used by technology companies but is rarely used in biology experiments. IoT can benefit cloud biology research through alarm notifications, automation, and the real-time monitoring of experiments. We developed an IoT architecture to control biological devices and implemented it in lab experiments. Lab devices for electrophysiology, microscopy, and microfluidics were created from the ground up to be part of a unified IoT architecture. The system allows each device to be monitored and controlled from an online web tool. We present our IoT architecture so other labs can replicate it for their own experiments.

Original language	English
Article number	100618
Journal	Internet of Things (Netherlands)
Volume	20
DOIs	https://doi.org/10.1016/j.iot.2022.100618
State	Published - Nov 2022

Keywords

Cloud biology
Cloud computing
Electrophysiology
Internet of things
Microfluidics
Microscopy

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10.1016/j.iot.2022.100618

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Parks, D. F., Voitiuk, K., Geng, J., Elliott, M. A. T., Keefe, M. G., Jung, E. A., Robbins, A., Baudin, P. V., Ly, V. T., Hawthorne, N., Yong, D., Sanso, S. E., Rezaee, N., Sevetson, J. L., Seiler, S. T., Currie, R., Pollen, A. A., Hengen, K. B., Nowakowski, T. J., ... Haussler, D. (2022). IoT cloud laboratory: Internet of Things architecture for cellular biology. Internet of Things (Netherlands), 20, Article 100618. https://doi.org/10.1016/j.iot.2022.100618

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title = "IoT cloud laboratory: Internet of Things architecture for cellular biology",

abstract = "The Internet of Things (IoT) provides a simple framework to control online devices easily. IoT is now a commonplace tool used by technology companies but is rarely used in biology experiments. IoT can benefit cloud biology research through alarm notifications, automation, and the real-time monitoring of experiments. We developed an IoT architecture to control biological devices and implemented it in lab experiments. Lab devices for electrophysiology, microscopy, and microfluidics were created from the ground up to be part of a unified IoT architecture. The system allows each device to be monitored and controlled from an online web tool. We present our IoT architecture so other labs can replicate it for their own experiments.",

keywords = "Cloud biology, Cloud computing, Electrophysiology, Internet of things, Microfluidics, Microscopy",

author = "Parks, {David F.} and Kateryna Voitiuk and Jinghui Geng and Elliott, {Matthew A.T.} and Keefe, {Matthew G.} and Jung, {Erik A.} and Ash Robbins and Baudin, {Pierre V.} and Ly, {Victoria T.} and Nico Hawthorne and Dylan Yong and Sanso, {Sebastian E.} and Nick Rezaee and Sevetson, {Jess L.} and Seiler, {Spencer T.} and Rob Currie and Pollen, {Alex A.} and Hengen, {Keith B.} and Nowakowski, {Tomasz J.} and Mostajo-Radji, {Mohammed A.} and Salama, {Sofie R.} and Mircea Teodorescu and David Haussler",

note = "Publisher Copyright: {\textcopyright} 2022 The Author(s)",

year = "2022",

month = nov,

doi = "10.1016/j.iot.2022.100618",

language = "English",

volume = "20",

journal = "Internet of Things (Netherlands)",

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Parks, DF, Voitiuk, K, Geng, J, Elliott, MAT, Keefe, MG, Jung, EA, Robbins, A, Baudin, PV, Ly, VT, Hawthorne, N, Yong, D, Sanso, SE, Rezaee, N, Sevetson, JL, Seiler, ST, Currie, R, Pollen, AA, Hengen, KB, Nowakowski, TJ, Mostajo-Radji, MA, Salama, SR, Teodorescu, M & Haussler, D 2022, 'IoT cloud laboratory: Internet of Things architecture for cellular biology', Internet of Things (Netherlands), vol. 20, 100618. https://doi.org/10.1016/j.iot.2022.100618

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T1 - IoT cloud laboratory

T2 - Internet of Things architecture for cellular biology

AU - Parks, David F.

AU - Voitiuk, Kateryna

AU - Geng, Jinghui

AU - Elliott, Matthew A.T.

AU - Keefe, Matthew G.

AU - Jung, Erik A.

AU - Robbins, Ash

AU - Baudin, Pierre V.

AU - Ly, Victoria T.

AU - Hawthorne, Nico

AU - Yong, Dylan

AU - Sanso, Sebastian E.

AU - Rezaee, Nick

AU - Sevetson, Jess L.

AU - Seiler, Spencer T.

AU - Currie, Rob

AU - Pollen, Alex A.

AU - Hengen, Keith B.

AU - Nowakowski, Tomasz J.

AU - Mostajo-Radji, Mohammed A.

AU - Salama, Sofie R.

AU - Teodorescu, Mircea

AU - Haussler, David

PY - 2022/11

Y1 - 2022/11

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AB - The Internet of Things (IoT) provides a simple framework to control online devices easily. IoT is now a commonplace tool used by technology companies but is rarely used in biology experiments. IoT can benefit cloud biology research through alarm notifications, automation, and the real-time monitoring of experiments. We developed an IoT architecture to control biological devices and implemented it in lab experiments. Lab devices for electrophysiology, microscopy, and microfluidics were created from the ground up to be part of a unified IoT architecture. The system allows each device to be monitored and controlled from an online web tool. We present our IoT architecture so other labs can replicate it for their own experiments.

KW - Cloud biology

KW - Cloud computing

KW - Electrophysiology

KW - Internet of things

KW - Microfluidics

KW - Microscopy

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VL - 20

JO - Internet of Things (Netherlands)

JF - Internet of Things (Netherlands)

M1 - 100618

ER -

IoT cloud laboratory: Internet of Things architecture for cellular biology

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