Invariability of central metabolic flux distribution in shewanella oneidensis MR-1 under environmental or genetic perturbations

Yinjie J. Tang, Hector Garcia Martin, Adam Deutschbauer, Xueyang Feng, Rick Huang, Xavier Llora, Adam Arkin, Jay D. Keasling

Research output: Contribution to journalArticlepeer-review

22 Scopus citations

Abstract

An environmentally important bacterium with versatile respiration, Shewanella oneidensis MR-1, displayed significantly different growth rates under three culture conditions: minimal medium (doubling time ̃3 h), salt stressed minimal medium (doubling time ̃6 h), and minimal medium with amino acid supplementation (doubling time ̃1.5 h). 13C-based metabolic flux analysis indicated that fluxes of central metabolic reactions remained relatively constant under the three growth conditions, which is in stark contrast to the reported significant changes in the transcript and metabolite profiles under various growth conditions. Furthermore, 10 transposon mutants of S. oneidensis MR-1 were randomly chosen from a transposon library and their flux distributions through central metabolic pathways were revealed to be identical, even though such mutational processes altered the secondary metabolism, for example, glycine and C1 (5, 10-Me-THF) metabolism.

Original languageEnglish
Pages (from-to)1254-1259
Number of pages6
JournalBiotechnology Progress
Volume25
Issue number5
DOIs
StatePublished - Sep 2009

Keywords

  • 13C-based
  • Growth rate
  • Metabolite profiles
  • Secondary metabolism
  • Transcript
  • Transposon mutants

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