High-dimensional mediation analysis for longitudinal mediators and survival outcomes

  • Lili Liu
  • , Haixiang Zhang
  • , Yinan Zheng
  • , Tao Gao
  • , Cheng Zheng
  • , Kai Zhang
  • , Lifang Hou
  • , Lei Liu

Research output: Contribution to journalArticlepeer-review

Abstract

Mediation analysis with high-dimensional mediators is crucial for identifying epigenetic pathways linking environmental exposures to health outcomes. However, high-dimensional mediation analysis methods for longitudinal mediators and a survival outcome remain underdeveloped. This study fills that gap by introducing a method that captures mediation effects over time using multivariate, longitudinally measured time-varying mediators. Our approach uses a longitudinal mixed effects model to examine the relationship between the exposure and the mediating process. We connect the mediating process to the survival outcome using a Cox proportional hazards model with time-varying mediators. To handle high-dimensional data, we first employ a mediation-based sure independence screening method for dimension reduction. A Lasso inference procedure is further utilized to identify significant time-varying mediators. We adopt a joint significance test to accurately control the family wise error rate in testing high-dimensional mediation hypotheses. Simulation studies and an analysis of the Coronary Artery Risk Development in Young Adults Study demonstrate the utility and validity of our method.

Original languageEnglish
Article numberbbaf206
JournalBriefings in Bioinformatics
Volume26
Issue number3
DOIs
StatePublished - May 1 2025

Keywords

  • high-dimensional mediation analysis
  • longitudinal data
  • survival outcome
  • variable selection

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