TY - JOUR
T1 - Heritability and genetic variance of dementia with Lewy bodies
AU - for the International Parkinson's Disease Genomics Consortium
AU - Guerreiro, Rita
AU - Escott-Price, Valentina
AU - Hernandez, Dena G.
AU - Kun-Rodrigues, Celia
AU - Ross, Owen A.
AU - Orme, Tatiana
AU - Neto, Joao Luis
AU - Carmona, Susana
AU - Dehghani, Nadia
AU - Eicher, John D.
AU - Shepherd, Claire
AU - Parkkinen, Laura
AU - Darwent, Lee
AU - Heckman, Michael G.
AU - Scholz, Sonja W.
AU - Troncoso, Juan C.
AU - Pletnikova, Olga
AU - Dawson, Ted
AU - Rosenthal, Liana
AU - Ansorge, Olaf
AU - Clarimon, Jordi
AU - Lleo, Alberto
AU - Morenas-Rodriguez, Estrella
AU - Clark, Lorraine
AU - Honig, Lawrence S.
AU - Marder, Karen
AU - Lemstra, Afina
AU - Rogaeva, Ekaterina
AU - St. George-Hyslop, Peter
AU - Londos, Elisabet
AU - Zetterberg, Henrik
AU - Barber, Imelda
AU - Braae, Anne
AU - Brown, Kristelle
AU - Morgan, Kevin
AU - Troakes, Claire
AU - Al-Sarraj, Safa
AU - Lashley, Tammaryn
AU - Holton, Janice
AU - Compta, Yaroslau
AU - Van Deerlin, Vivianna
AU - Serrano, Geidy E.
AU - Beach, Thomas G.
AU - Lesage, Suzanne
AU - Galasko, Douglas
AU - Masliah, Eliezer
AU - Santana, Isabel
AU - Pastor, Pau
AU - Diez-Fairen, Monica
AU - Morris, John C.
N1 - Publisher Copyright:
© 2019 Elsevier Inc.
PY - 2019/7
Y1 - 2019/7
N2 - Recent large-scale genetic studies have allowed for the first glimpse of the effects of common genetic variability in dementia with Lewy bodies (DLB), identifying risk variants with appreciable effect sizes. However, it is currently well established that a substantial portion of the genetic heritable component of complex traits is not captured by genome-wide significant SNPs. To overcome this issue, we have estimated the proportion of phenotypic variance explained by genetic variability (SNP heritability) in DLB using a method that is unbiased by allele frequency or linkage disequilibrium properties of the underlying variants. This shows that the heritability of DLB is nearly twice as high as previous estimates based on common variants only (31% vs 59.9%). We also determine the amount of phenotypic variance in DLB that can be explained by recent polygenic risk scores from either Parkinson's disease (PD) or Alzheimer's disease (AD), and show that, despite being highly significant, they explain a low amount of variance. Additionally, to identify pleiotropic events that might improve our understanding of the disease, we performed genetic correlation analyses of DLB with over 200 diseases and biomedically relevant traits. Our data shows that DLB has a positive correlation with education phenotypes, which is opposite to what occurs in AD. Overall, our data suggests that novel genetic risk factors for DLB should be identified by larger GWAS and these are likely to be independent from known AD and PD risk variants.
AB - Recent large-scale genetic studies have allowed for the first glimpse of the effects of common genetic variability in dementia with Lewy bodies (DLB), identifying risk variants with appreciable effect sizes. However, it is currently well established that a substantial portion of the genetic heritable component of complex traits is not captured by genome-wide significant SNPs. To overcome this issue, we have estimated the proportion of phenotypic variance explained by genetic variability (SNP heritability) in DLB using a method that is unbiased by allele frequency or linkage disequilibrium properties of the underlying variants. This shows that the heritability of DLB is nearly twice as high as previous estimates based on common variants only (31% vs 59.9%). We also determine the amount of phenotypic variance in DLB that can be explained by recent polygenic risk scores from either Parkinson's disease (PD) or Alzheimer's disease (AD), and show that, despite being highly significant, they explain a low amount of variance. Additionally, to identify pleiotropic events that might improve our understanding of the disease, we performed genetic correlation analyses of DLB with over 200 diseases and biomedically relevant traits. Our data shows that DLB has a positive correlation with education phenotypes, which is opposite to what occurs in AD. Overall, our data suggests that novel genetic risk factors for DLB should be identified by larger GWAS and these are likely to be independent from known AD and PD risk variants.
KW - Dementia
KW - Genetic correlation
KW - Genetic variance
KW - Lewy bodies
UR - http://www.scopus.com/inward/record.url?scp=85064074557&partnerID=8YFLogxK
U2 - 10.1016/j.nbd.2019.04.004
DO - 10.1016/j.nbd.2019.04.004
M3 - Article
C2 - 30953760
AN - SCOPUS:85064074557
SN - 0969-9961
VL - 127
SP - 492
EP - 501
JO - Neurobiology of Disease
JF - Neurobiology of Disease
ER -