Hamiltonian Monte Carlo sampling in Bayesian empirical likelihood computation

Sanjay Chaudhuri, Debashis Mondal, Teng Yin

    Research output: Contribution to journalArticlepeer-review

    33 Scopus citations

    Abstract

    We consider Bayesian empirical likelihood estimation and develop an efficient Hamiltonian Monte Carlo method for sampling from the posterior distribution of the parameters of interest. The method proposed uses hitherto unknown properties of the gradient of the underlying log-empirical-likelihood function. We use results from convex analysis to show that these properties hold under minimal assumptions on the parameter space, prior density and the functions used in the estimating equations determining the empirical likelihood. Our method employs a finite number of estimating equations and observations but produces valid semiparametric inference for a large class of statistical models including mixed effects models, generalized linear models and hierarchical Bayes models. We overcome major challenges posed by complex, non-convex boundaries of the support routinely observed for empirical likelihood which prevent efficient implementation of traditional Markov chain Monte Carlo methods like random-walk Metropolis–Hastings sampling etc. with or without parallel tempering. A simulation study confirms that our method converges quickly and draws samples from the posterior support efficiently. We further illustrate its utility through an analysis of a discrete data set in small area estimation.

    Original languageEnglish
    Pages (from-to)293-320
    Number of pages28
    JournalJournal of the Royal Statistical Society. Series B: Statistical Methodology
    Volume79
    Issue number1
    DOIs
    StatePublished - Jan 1 2017

    Keywords

    • Constrained convex optimization
    • Empirical likelihood
    • Generalized linear models
    • Hamiltonian Monte Carlo methods
    • Mixed effect models
    • Score equations
    • Small area estimation
    • Unbiased estimating equations

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