TY - JOUR
T1 - Genomic landscape of high-grade meningiomas
AU - Bi, Wenya Linda
AU - Greenwald, Noah F.
AU - Abedalthagafi, Malak
AU - Wala, Jeremiah
AU - Gibson, Will J.
AU - Agarwalla, Pankaj K.
AU - Horowitz, Peleg
AU - Schumacher, Steven E.
AU - Esaulova, Ekaterina
AU - Mei, Yu
AU - Chevalier, Aaron
AU - Ducar, Matthew A.
AU - Thorner, Aaron R.
AU - Van Hummelen, Paul
AU - Stemmer-Rachamimov, Anat O.
AU - Artyomov, Maksym
AU - Al-Mefty, Ossama
AU - Dunn, Gavin P.
AU - Santagata, Sandro
AU - Dunn, Ian F.
AU - Beroukhim, Rameen
N1 - Funding Information:
We are grateful to Marian Slaney and Sebastian Valentino for histopathologic assistance; the Center for Cancer Genome Discovery and Broad Institute for sequencing support; Andrew Dunford and Daniel Rosebrock for bioinformatics support; and Bob Wiemann for patient identification. This work was supported by the Brain Science Foundation (I.F.D., R.B.), Sontag Foundation (R.B.), Voices Against Brain Cancer (R.B.), Gray Matters Brain Cancer Foundation (R.B.), DFCI-Novartis Drug Discovery Program (R.B.), Sanad Children’s Cancer Support Association (M.A.), NIH grants R01 CA188228 (R.B.) and K08NS092912 (G.P.D.).
Publisher Copyright:
© 2017 The Author(s).
PY - 2017/12/1
Y1 - 2017/12/1
N2 - High-grade meningiomas frequently recur and are associated with high rates of morbidity and mortality. To determine the factors that promote the development and evolution of these tumors, we analyzed the genomes of 134 high-grade meningiomas and compared this information with data from 595 previously published meningiomas. High-grade meningiomas had a higher mutation burden than low-grade meningiomas but did not harbor any significantly mutated genes aside from NF2. High-grade meningiomas also possessed significantly elevated rates of chromosomal gains and losses, especially among tumors with monosomy 22. Meningiomas previously treated with adjuvant radiation had significantly more copy number alterations than radiation-induced or radiation-naïve meningiomas. Across serial recurrences, genomic disruption preceded the emergence of nearly all mutations, remained largely uniform across time, and when present in low-grade meningiomas correlated with subsequent progression to a higher grade. In contrast to the largely stable copy number alterations, mutations were strikingly heterogeneous across tumor recurrences, likely due to extensive geographic heterogeneity in the primary tumor. While high-grade meningiomas harbored significantly fewer overtly targetable alterations than low-grade meningiomas, they contained numerous mutations that are predicted to be neoantigens, suggesting that immunologic targeting may be of therapeutic value.
AB - High-grade meningiomas frequently recur and are associated with high rates of morbidity and mortality. To determine the factors that promote the development and evolution of these tumors, we analyzed the genomes of 134 high-grade meningiomas and compared this information with data from 595 previously published meningiomas. High-grade meningiomas had a higher mutation burden than low-grade meningiomas but did not harbor any significantly mutated genes aside from NF2. High-grade meningiomas also possessed significantly elevated rates of chromosomal gains and losses, especially among tumors with monosomy 22. Meningiomas previously treated with adjuvant radiation had significantly more copy number alterations than radiation-induced or radiation-naïve meningiomas. Across serial recurrences, genomic disruption preceded the emergence of nearly all mutations, remained largely uniform across time, and when present in low-grade meningiomas correlated with subsequent progression to a higher grade. In contrast to the largely stable copy number alterations, mutations were strikingly heterogeneous across tumor recurrences, likely due to extensive geographic heterogeneity in the primary tumor. While high-grade meningiomas harbored significantly fewer overtly targetable alterations than low-grade meningiomas, they contained numerous mutations that are predicted to be neoantigens, suggesting that immunologic targeting may be of therapeutic value.
UR - http://www.scopus.com/inward/record.url?scp=85029594379&partnerID=8YFLogxK
U2 - 10.1038/s41525-017-0014-7
DO - 10.1038/s41525-017-0014-7
M3 - Article
C2 - 28713588
AN - SCOPUS:85029594379
VL - 2
JO - npj Genomic Medicine
JF - npj Genomic Medicine
SN - 2056-7944
IS - 1
M1 - 15
ER -