Abstract
We present the Stochastic Simulator Compiler (SSC), a tool for exact stochastic simulations of well-mixed and spatially heterogeneous systems. SSC is the first tool to allow a readable high-level description with spatially heterogeneous simulation algorithms and complex geometries; this permits large systems to be expressed concisely. Meanwhile, direct native-code compilation allows SSC to generate very fast simulations.
Original language | English |
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Pages (from-to) | 2289-2291 |
Number of pages | 3 |
Journal | Bioinformatics |
Volume | 25 |
Issue number | 17 |
DOIs | |
State | Published - 2009 |