TY - JOUR
T1 - DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease
AU - the COPDGene and ECLIPSE Investigators
AU - Lee, Jin H.
AU - McDonald, Merry Lynn N.
AU - Cho, Michael H.
AU - Wan, Emily S.
AU - Castaldi, Peter J.
AU - Hunninghake, Gary M.
AU - Marchetti, Nathaniel
AU - Lynch, David A.
AU - Crapo, James D.
AU - Lomas, David A.
AU - Coxson, Harvey O.
AU - Bakke, Per S.
AU - Silverman, Edwin K.
AU - Hersh, Craig P.
AU - Bratschie, Stephanie
AU - Lantz, Rochelle
AU - Melanson, Sandra
AU - Stepp, Lori
AU - Bowler, Russell
AU - Curtis, Jeffrey L.
AU - Han, Mei Lan
AU - Hokanson, John E.
AU - Make, Barry J.
AU - Sutherland, E. Rand
AU - Bleecker, Eugene R.
AU - Crystal, Ronald G.
AU - Hogg, James C.
AU - Province, Michael A.
AU - Rennard, Stephen I.
AU - Thomas, Duncan C.
AU - Croxton, Thomas
AU - Gan, Weiniu
AU - Postow, Lisa
AU - Walsh, John W.
AU - Plant, Randel
AU - Prieto, Delia
AU - Cossette, Daniel
AU - Kelly, Roxanne K.
AU - Everett, Douglas
AU - Williams, Andre
AU - Knowles, Ruthie
AU - Wilson, Carla
AU - Hokanson, John
AU - Black-Shinn, Jennifer
AU - Kinney, Gregory
AU - Cho, Michael
AU - DeMeo, Dawn
AU - Foreman, Marilyn G.
AU - Hansel, Nadia N.
AU - Hardin, Megan E.
N1 - Publisher Copyright:
© 2014 Lee et al.; licensee BioMed Central Ltd.
PY - 2014/8/20
Y1 - 2014/8/20
N2 - Background: Chronic obstructive pulmonary disease (COPD) is characterized by expiratory flow limitation, causing air trapping and lung hyperinflation. Hyperinflation leads to reduced exercise tolerance and poor quality of life in COPD patients. Total lung capacity (TLC) is an indicator of hyperinflation particularly in subjects with moderate-to-severe airflow obstruction. The aim of our study was to identify genetic variants associated with TLC in COPD.Methods: We performed genome-wide association studies (GWASs) in white subjects from three cohorts: the COPDGene Study; the Evaluation of COPD Longitudinally to Identify Predictive Surrogate Endpoints (ECLIPSE); and GenKOLS (Bergen, Norway). All subjects were current or ex-smokers with at least moderate airflow obstruction, defined by a ratio of forced expiratory volume in 1 second to forced vital capacity (FEV1/FVC) <0.7 and FEV1 < 80% predicted on post-bronchodilator spirometry. TLC was calculated by using volumetric computed tomography scans at full inspiration (TLCCT). Genotyping in each cohort was completed, with statistical imputation of additional markers. To find genetic variants associated with TLCCT, linear regression models were used, with adjustment for age, sex, pack-years of smoking, height, and principal components for genetic ancestry. Results were summarized using fixed-effect meta-analysis.Results: Analysis of a total of 4,543 COPD subjects identified one genome-wide significant locus on chromosome 5p15.2 (rs114929486, β = 0.42L, P = 4.66 × 10-8).Conclusions: In COPD, TLCCT was associated with a SNP in dynein, axonemal, heavy chain 5 (DNAH5), a gene in which genetic variants can cause primary ciliary dyskinesia. DNAH5 could have an effect on hyperinflation in COPD.
AB - Background: Chronic obstructive pulmonary disease (COPD) is characterized by expiratory flow limitation, causing air trapping and lung hyperinflation. Hyperinflation leads to reduced exercise tolerance and poor quality of life in COPD patients. Total lung capacity (TLC) is an indicator of hyperinflation particularly in subjects with moderate-to-severe airflow obstruction. The aim of our study was to identify genetic variants associated with TLC in COPD.Methods: We performed genome-wide association studies (GWASs) in white subjects from three cohorts: the COPDGene Study; the Evaluation of COPD Longitudinally to Identify Predictive Surrogate Endpoints (ECLIPSE); and GenKOLS (Bergen, Norway). All subjects were current or ex-smokers with at least moderate airflow obstruction, defined by a ratio of forced expiratory volume in 1 second to forced vital capacity (FEV1/FVC) <0.7 and FEV1 < 80% predicted on post-bronchodilator spirometry. TLC was calculated by using volumetric computed tomography scans at full inspiration (TLCCT). Genotyping in each cohort was completed, with statistical imputation of additional markers. To find genetic variants associated with TLCCT, linear regression models were used, with adjustment for age, sex, pack-years of smoking, height, and principal components for genetic ancestry. Results were summarized using fixed-effect meta-analysis.Results: Analysis of a total of 4,543 COPD subjects identified one genome-wide significant locus on chromosome 5p15.2 (rs114929486, β = 0.42L, P = 4.66 × 10-8).Conclusions: In COPD, TLCCT was associated with a SNP in dynein, axonemal, heavy chain 5 (DNAH5), a gene in which genetic variants can cause primary ciliary dyskinesia. DNAH5 could have an effect on hyperinflation in COPD.
KW - Chronic obstructive
KW - DNAH5
KW - Genome-wide association analysis
KW - Hyperinflation
KW - Pulmonary disease
KW - Total lung capacity
UR - http://www.scopus.com/inward/record.url?scp=84908157737&partnerID=8YFLogxK
U2 - 10.1186/s12931-014-0097-y
DO - 10.1186/s12931-014-0097-y
M3 - Article
C2 - 25134640
AN - SCOPUS:84908157737
SN - 1465-9921
VL - 15
JO - Respiratory Research
JF - Respiratory Research
IS - 1
M1 - 97
ER -