TY - JOUR
T1 - DNA Methylation and Regulatory Elements during Chicken Germline Stem Cell Differentiation
AU - He, Yanghua
AU - Zuo, Qisheng
AU - Edwards, John
AU - Zhao, Keji
AU - Lei, Jinzhi
AU - Cai, Wentao
AU - Nie, Qing
AU - Li, Bichun
AU - Song, Jiuzhou
N1 - Funding Information:
This project was supported by a National Research Initiative Competitive Grant (no. USDA-NRI/NIFA 2010-65205-20588 ) from the USDA National Institute of Food and Agriculture.
Funding Information:
This project was supported by a National Research Initiative Competitive Grant (no. USDA-NRI/NIFA 2010-65205-20588) from the USDA National Institute of Food and Agriculture.
Publisher Copyright:
© 2018 The Author(s)
PY - 2018/6/5
Y1 - 2018/6/5
N2 - The production of germ cells in vitro would open important new avenues for stem biology and human medicine, but the mechanisms of germ cell differentiation are not well understood. The chicken, as a great model for embryology and development, was used in this study to help us explore its regulatory mechanisms. In this study, we reported a comprehensive genome-wide DNA methylation landscape in chicken germ cells, and transcriptomic dynamics was also presented. By uncovering DNA methylation patterns on individual genes, some genes accurately modulated by DNA methylation were found to be associated with cancers and virus infection, e.g., AKT1 and CTNNB1. Chicken-unique markers were also discovered for identifying male germ cells. Importantly, integrated epigenetic mechanisms were explored during male germ cell differentiation, which provides deep insight into the epigenetic processes associated with male germ cell differentiation and possibly improves treatment options to male infertility in animals and humans. In this article, Song, Li, and their colleagues reported a comprehensive genome-wide DNA methylation landscape in chicken germ cells. The integrated epigenetic mechanisms were explored, specifically, germ cell differentiation experiences through a highly orchestrated process that involves multiple epigenetic events, which would give a clue for curing male infertility in animals and humans.
AB - The production of germ cells in vitro would open important new avenues for stem biology and human medicine, but the mechanisms of germ cell differentiation are not well understood. The chicken, as a great model for embryology and development, was used in this study to help us explore its regulatory mechanisms. In this study, we reported a comprehensive genome-wide DNA methylation landscape in chicken germ cells, and transcriptomic dynamics was also presented. By uncovering DNA methylation patterns on individual genes, some genes accurately modulated by DNA methylation were found to be associated with cancers and virus infection, e.g., AKT1 and CTNNB1. Chicken-unique markers were also discovered for identifying male germ cells. Importantly, integrated epigenetic mechanisms were explored during male germ cell differentiation, which provides deep insight into the epigenetic processes associated with male germ cell differentiation and possibly improves treatment options to male infertility in animals and humans. In this article, Song, Li, and their colleagues reported a comprehensive genome-wide DNA methylation landscape in chicken germ cells. The integrated epigenetic mechanisms were explored, specifically, germ cell differentiation experiences through a highly orchestrated process that involves multiple epigenetic events, which would give a clue for curing male infertility in animals and humans.
KW - DNA methylation
KW - ESCs
KW - PGCs
KW - SSCs
KW - chicken
KW - epigenetics
KW - gene expression
KW - germline stem cell differentiation
KW - non-coding RNAs
KW - transcription factor motifs
UR - http://www.scopus.com/inward/record.url?scp=85045570882&partnerID=8YFLogxK
U2 - 10.1016/j.stemcr.2018.03.018
DO - 10.1016/j.stemcr.2018.03.018
M3 - Article
C2 - 29681542
AN - SCOPUS:85045570882
VL - 10
SP - 1793
EP - 1806
JO - Stem Cell Reports
JF - Stem Cell Reports
SN - 2213-6711
IS - 6
ER -