Conformational mimicry II. An obligatory cis amide bond in a small linear pep tide

G. DAVID SMITH, JANUSZ ZABROCKI, TOD A. FLAK, GARLAND R. MARSHALL

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46 Scopus citations

Abstract

The structure of Z‐Proψ[CN4]‐Ala‐OBzl has been determined by X‐ray crystallographic techniques. The structure crystallizes in space group P21 with cell constants a = 22.176(3) Å, b = 6.141(1)Å, c = 8.275(1) Å, β= 98.31(1), and Z = 2. The structure has been refined to a residual of 0.038 for 2538 independent data. The amide bond between the prolyl and alanyl residues is cis, a result of the presence of the tetrazole ring system, as is the urethane bond linking the benzyloxycarbonyl and the prolyl groups. A comparison of the structures in this study to other structures containing cis amide bonds shows that the tetrazole ring system, when incorporated into peptides, mimics a cis amide bond. Changes in the distance between the α‐carbons adjacent to the tetrazole rings in the linear peptide as compared with the bicyclic diketopiperazine required a reassessment of the conformational mimicry with the cis amide bond.

Original languageEnglish
Pages (from-to)191-197
Number of pages7
JournalInternational Journal of Peptide and Protein Research
Volume37
Issue number3
DOIs
StatePublished - Mar 1991

Keywords

  • amide bond
  • conformational constraints
  • conformational mimicry
  • tetrazole ring

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