Conditional random pattern algorithm for LOH inference and segmentation

Keyphrases

• Loss of Heterozygosity 100%
• Pattern Search 100%
• Single nucleotide Polymorphism 66%
• Genotyping Error 33%
• SNP Array 16%
• Tumor Samples 16%
• Paired Samples 16%
• Genotype 16%
• Affymetrix 16%
• Tumor Evolution 16%
• Pattern-based Approach 16%
• Segmentation Algorithm 16%
• Hidden Markov Model 16%
• Inference Algorithms 16%
• Pattern Model 16%
• Motivation Losses 16%
• Genotyping Error Rate 16%

Mathematics

• Conditionals 100%
• Random Pattern 100%
• Real Data 33%
• Simulated Data 33%
• Error Rate 33%
• Sample Case 33%
• Hidden Markov Model 33%
• Pattern Model 33%
• Paired Sample 33%

Computer Science

• Random Pattern 100%
• Experimental Result 33%
• Conventional Method 33%
• segmentation algorithm 33%