BreakPoint Surveyor: A pipeline for structural variant visualization

Matthew A. Wyczalkowski, Kristine Wylie, Song Cao, Michael D. Mclellan, Jennifer Flynn, Mo Huang, Kai Ye, Xian Fan, Ken Chen, Michael Wendl, Li Ding

Research output: Contribution to journalArticle

3 Scopus citations

Abstract

Summary BreakPoint Surveyor (BPS) is a computational pipeline for the discovery, characterization, and visualization of complex genomic rearrangements, such as viral genome integration, in paired-end sequence data. BPS facilitates interpretation of structural variants by merging structural variant breakpoint predictions, gene exon structure, read depth, and RNA-sequencing expression into a single comprehensive figure.

Original languageEnglish
Pages (from-to)3121-3122
Number of pages2
JournalBioinformatics
Volume33
Issue number19
DOIs
StatePublished - Jan 1 2017

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