A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing

Yang Song; Li Xiao; Indumathy Jayamani; Zhen He; Alison M. Cupples

doi:10.1016/j.mimet.2014.10.010

A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing

Yang Song
, Li Xiao
, Indumathy Jayamani
, Zhen He
, Alison M. Cupples

Department of Energy, Environmental & Chemical Engineering

Research output: Contribution to journal › Article › peer-review

40 Scopus citations

Abstract

Stable isotope probing and high throughput sequencing were used to characterize the microbial communities involved in carbon uptake in microbial fuel cells at two levels of electricity generation. With acetate, the dominant phylotypes involved in carbon uptake included Geobacter and Rhodocyclaceae. With glucose, both Enterobacteriaceae and Geobacter were dominant.

Original language	English
Pages (from-to)	4-11
Number of pages	8
Journal	Journal of Microbiological Methods
Volume	108
DOIs	https://doi.org/10.1016/j.mimet.2014.10.010
State	Published - Jan 1 2015

Keywords

Bioenergy
Illumina sequencing
Microbial community
Microbial fuel cells
Stable isotope probing

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10.1016/j.mimet.2014.10.010

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title = "A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing",

abstract = "Stable isotope probing and high throughput sequencing were used to characterize the microbial communities involved in carbon uptake in microbial fuel cells at two levels of electricity generation. With acetate, the dominant phylotypes involved in carbon uptake included Geobacter and Rhodocyclaceae. With glucose, both Enterobacteriaceae and Geobacter were dominant.",

keywords = "Bioenergy, Illumina sequencing, Microbial community, Microbial fuel cells, Stable isotope probing",

author = "Yang Song and Li Xiao and Indumathy Jayamani and Zhen He and Cupples, \{Alison M.\}",

note = "Publisher Copyright: {\textcopyright} 2014 Elsevier B.V.",

year = "2015",

month = jan,

day = "1",

doi = "10.1016/j.mimet.2014.10.010",

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pages = "4--11",

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A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing. / Song, Yang; Xiao, Li; Jayamani, Indumathy et al.
In: Journal of Microbiological Methods, Vol. 108, 01.01.2015, p. 4-11.

Research output: Contribution to journal › Article › peer-review

TY - JOUR

T1 - A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing

AU - Song, Yang

AU - Xiao, Li

AU - Jayamani, Indumathy

AU - He, Zhen

AU - Cupples, Alison M.

PY - 2015/1/1

Y1 - 2015/1/1

N2 - Stable isotope probing and high throughput sequencing were used to characterize the microbial communities involved in carbon uptake in microbial fuel cells at two levels of electricity generation. With acetate, the dominant phylotypes involved in carbon uptake included Geobacter and Rhodocyclaceae. With glucose, both Enterobacteriaceae and Geobacter were dominant.

AB - Stable isotope probing and high throughput sequencing were used to characterize the microbial communities involved in carbon uptake in microbial fuel cells at two levels of electricity generation. With acetate, the dominant phylotypes involved in carbon uptake included Geobacter and Rhodocyclaceae. With glucose, both Enterobacteriaceae and Geobacter were dominant.

KW - Bioenergy

KW - Illumina sequencing

KW - Microbial community

KW - Microbial fuel cells

KW - Stable isotope probing

UR - https://www.scopus.com/pages/publications/84912036300

U2 - 10.1016/j.mimet.2014.10.010

DO - 10.1016/j.mimet.2014.10.010

M3 - Article

C2 - 25448023

AN - SCOPUS:84912036300

SN - 0167-7012

VL - 108

SP - 4

EP - 11

JO - Journal of Microbiological Methods

JF - Journal of Microbiological Methods

ER -

A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing

Abstract

Keywords

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