A modular system of DNA enhancer elements mediates tissue-specific activation of transcription by high dietary zinc in C. elegans

Hyun Cheol Roh, Ivan Dimitrov, Krupa Deshmukh, Guoyan Zhao, Kurt Warnhoff, Daniel Cabrera, Wendy Tsai, Kerry Kornfeld

Research output: Contribution to journalArticlepeer-review

16 Scopus citations

Abstract

Zinc is essential for biological systems, and aberrant zinc metabolism is implicated in a broad range of human diseases. To maintain homeostasis in response to fluctuating levels of dietary zinc, animals regulate gene expression; however, mechanisms that mediate the transcriptional response to fluctuating levels of zinc have not been fully defined. Here, we identified DNA enhancer elements that mediate intestine-specific transcriptional activation in response to high levels of dietary zinc in C. elegans. Using bioinformatics, we characterized an evolutionarily conserved enhancer element present in multiple zinc-inducible genes, the high zinc activation (HZA) element. The HZA was consistently adjacent to a GATA element that mediates expression in intestinal cells. Functional studies using transgenic animals demonstrated that this modular system of DNA enhancers mediates tissue-specific transcriptional activation in response to high levels of dietary zinc. We used this information to search the genome and successfully identified novel zinc-inducible genes. To characterize the mechanism of enhancer function, we demonstrated that the GATA transcription factor ELT-2 and the mediator subunit MDT-15 are necessary for zinc-responsive transcriptional activation. These findings define new mechanisms of zinc homeostasis and tissue-specific regulation of transcription.

Original languageEnglish
Pages (from-to)803-816
Number of pages14
JournalNucleic acids research
Volume43
Issue number2
DOIs
StatePublished - Jan 30 2015

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