A Mechanism for Poor High Mass Performance in Fourier Transform Mass Spectrometry

The discovery of a mass-dependent electrical mechanism for signal loss of high mass ions in Fourier transform mass spectrometry is reported. Theoretical calculations and experimental evidence show the existence of resonances involving the z-motion and radial motion of the ion. The resonances are intrinsic in the cubic trap. This results in energy transfer between modes, expansion of the ion cloud, and a corresponding loss of signal. Quadrupolar trapping potential wells are proposed as a solution.