TY - JOUR
T1 - A comprehensive review of artificial intelligence and network based approaches to drug repurposing in Covid-19
AU - Ahmed, Faheem
AU - Soomro, Afaque Manzoor
AU - Chethikkattuveli Salih, Abdul Rahim
AU - Samantasinghar, Anupama
AU - Asif, Arun
AU - Kang, In Suk
AU - Choi, Kyung Hyun
N1 - Publisher Copyright:
© 2022 The Authors
PY - 2022/9
Y1 - 2022/9
N2 - Conventional drug discovery and development is tedious and time-taking process; because of which it has failed to keep the required pace to mitigate threats and cater demands of viral and re-occurring diseases, such as Covid-19. The main reasons of this delay in traditional drug development are: high attrition rates, extensive time requirements, and huge financial investment with significant risk. The effective solution to de novo drug discovery is drug repurposing. Previous studies have shown that the network-based approaches and analysis are versatile platform for repurposing as the network biology is used to model the interactions between variety of biological concepts. Herein, we provide a comprehensive background of machine learning and deep learning in drug repurposing while specifically focusing on the applications of network-based approach to drug repurposing in Covid-19, data sources, and tools used. Furthermore, use of network proximity, network diffusion, and AI on network-based drug repurposing for Covid-19 is well-explained. Finally, limitations of network-based approaches in general and specific to network are stated along with future recommendations for better network-based models.
AB - Conventional drug discovery and development is tedious and time-taking process; because of which it has failed to keep the required pace to mitigate threats and cater demands of viral and re-occurring diseases, such as Covid-19. The main reasons of this delay in traditional drug development are: high attrition rates, extensive time requirements, and huge financial investment with significant risk. The effective solution to de novo drug discovery is drug repurposing. Previous studies have shown that the network-based approaches and analysis are versatile platform for repurposing as the network biology is used to model the interactions between variety of biological concepts. Herein, we provide a comprehensive background of machine learning and deep learning in drug repurposing while specifically focusing on the applications of network-based approach to drug repurposing in Covid-19, data sources, and tools used. Furthermore, use of network proximity, network diffusion, and AI on network-based drug repurposing for Covid-19 is well-explained. Finally, limitations of network-based approaches in general and specific to network are stated along with future recommendations for better network-based models.
KW - AI on networks
KW - Deep learning
KW - Drug repurposing
KW - Machine learning
KW - Network analysis
KW - Network diffusion
KW - Network proximity
UR - https://www.scopus.com/pages/publications/85133557750
U2 - 10.1016/j.biopha.2022.113350
DO - 10.1016/j.biopha.2022.113350
M3 - Review article
C2 - 35777222
AN - SCOPUS:85133557750
SN - 0753-3322
VL - 153
JO - Biomedicine and Pharmacotherapy
JF - Biomedicine and Pharmacotherapy
M1 - 113350
ER -