Find Research outputs

Search results

• 2022

  A dominant negative variant of RAB5B disrupts maturation of surfactant protein B and surfactant protein C

  Undiagnosed Diseases Network, Feb 8 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 6, e2105228119.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• A dual-center cohort study on the association between early deep sedation and clinical outcomes in mechanically ventilated patients during the COVID-19 pandemic: The COVID-SED study

  Stephens, R. J., Evans, E. M., Pajor, M. J., Pappal, R. D., Egan, H. M., Wei, M., Hayes, H., Morris, J. A., Becker, N., Roberts, B. W., Kollef, M. H., Mohr, N. M. & Fuller, B. M., Dec 2022, In: Critical Care. 26, 1, 179.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Adult Spinal Deformity Surgery Is Associated with Increased Productivity and Decreased Absenteeism From Work and School

  International Spine Study Group (ISSG), Feb 15 2022, In: Spine. 47, 4, p. 287-294 8 p.

  Research output: Contribution to journal › Article › peer-review

• Advanced practice providers in academic emergency medicine: A national survey of chairs and program directors

  Carpenter, C. R., Abrams, S., Courtney, D. M., Dorner, S. C., Dyne, P., Elia, T., Jourdan, D. N., Kaji, A. H., Martin, I. B. K., Mills, A. M., Nagasawa, K., Pillow, M., Reznek, M., Starnes, A., Temin, E., Wolfe, R. & Chekijian, S., Feb 2022, In: Academic Emergency Medicine. 29, 2, p. 184-192 9 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Advances and Future Directions in Understanding Associations Between Stressful Events and Cortical Thickness in Psychosis Risk

  Karcher, N. R., Feb 2022, In: Biological Psychiatry: Cognitive Neuroscience and Neuroimaging. 7, 2, p. 124-126 3 p.

  Research output: Contribution to journal › Comment/debate

• Advances and gaps in SARS-CoV-2 infection models

  Muñoz-Fontela, C., Widerspick, L., Albrecht, R. A., Beer, M., Carroll, M. W., de Wit, E., Diamond, M. S., Dowling, W. E., Funnell, S. G. P., García-Sastre, A., Gerhards, N. M., de Jong, R., Munster, V. J., Neyts, J., Perlman, S., Reed, D. S., Richt, J. A., Riveros-Balta, X., Roy, C. J., Salguero, F. J., & 7 othersSchotsaert, M., Schwartz, L. M., Seder, R. A., Segalés, J., Vasan, S. S., Henao-Restrepo, A. M. & Barouch, D. H., Jan 2022, In: PLoS pathogens. 18, 1, e1010161.

  Research output: Contribution to journal › Review article › peer-review

  Open Access
  11 Scopus citations

• Advances in mass spectrometry-based footprinting of membrane proteins

  Sun, J., Li, W. & Gross, M. L., Apr 2022, In: Proteomics. 22, 8, 2100222.

  Research output: Contribution to journal › Review article › peer-review

• Advances in Our Clinical Understanding of Autonomic Regulation Therapy Using Vagal Nerve Stimulation in Patients Living With Heart Failure

  Konstam, M. A., Mann, D. L., Udelson, J. J. E., Ardell, J. L., De Ferrari, G. M., Cowie, M. R., Klein, H. U., Gregory, D. D., Massaro, J. M., Libbus, I., DiCarlo, L. A., Butler, J., Parker, J. D. & Teerlink, J. R., Apr 21 2022, In: Frontiers in Physiology. 13, 857538.

  Research output: Contribution to journal › Review article › peer-review

• Advances in understanding interferon-mediated immune responses to enteric viruses in intestinal organoids

  Nolan, L. S. & Baldridge, M. T., Jul 22 2022, In: Frontiers in immunology. 13, 943334.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

• Advancing gender equity in the academy

  Beidas, R. S., Hannon, P. A., James, A. S. & Emmons, K. M., Apr 2022, In: Science Advances. 8, 13, 0430.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Adverse driving behaviors are associated with sleep apnea severity and age in cognitively normal older adults at risk for Alzheimer's disease

  Doherty, J. M., Roe, C. M., Murphy, S. A., Johnson, A. M., Fleischer, E., Toedebusch, C. D., Redrick, T., Freund, D., Morris, J. C., Schindler, S. E., Fagan, A. M., Holtzman, D. M., Lucey, B. P. & Babulal, G. M., Jun 1 2022, In: Sleep. 45, 6, zsac070.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Adverse events related to ultrasound-guided regional anesthesia performed by Emergency Physicians: Systematic review protocol

  Stickles, S. P., Kane, D. S., Kraus, C. K., Strony, R. J., Ablordeppey, E. A., Doering, M. M., Theodoro, D., Lee, J. S. & Carpenter, C. R., Jun 2022, In: PloS one. 17, 6 June, e0269697.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Adverse Pregnancy Outcomes and Postpartum Care as a Pathway to Future Health

  Garr Barry, V., Johnson, T. N., Herrick, C., Lindley, K. & Carter, E., Sep 1 2022, In: Clinical Obstetrics and Gynecology. 65, 3, p. 632-647 16 p.

  Research output: Contribution to journal › Article › peer-review

• A Dynamic and Combinatorial Histone Code Drives Malaria Parasite Asexual and Sexual Development

  von Grüning, H., Coradin, M., Mendoza, M. R., Reader, J., Sidoli, S., Garcia, B. A. & Birkholtz, L. M., Mar 2022, In: Molecular and Cellular Proteomics. 21, 3, 100199.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  4 Scopus citations

• A family of estimators to diagnostic accuracy when candidate tests are subject to detection limits—Application to diagnosing early stage Alzheimer disease

  Xiong, C., Luo, J., Agboola, F., Grant, E. & Morris, J. C., May 2022, In: Statistical Methods in Medical Research. 31, 5, p. 882-898 17 p.

  Research output: Contribution to journal › Article › peer-review

• A First-in-Human Phase 1 Study of a Novel Selective Androgen Receptor Modulator (SARM), RAD140, in ER+/HER2- Metastatic Breast Cancer

  LoRusso, P., Hamilton, E., Ma, C., Vidula, N., Bagley, R. G., Troy, S., Annett, M., Yu, Z., Conlan, M. G. & Weise, A., Jan 2022, In: Clinical breast cancer. 22, 1, p. 67-77 11 p.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• A Fourteen-year Review of Practice Patterns and Evidence-based Medicine in Operative Metacarpal Fracture Repair

  Sasson, D. C., Shah, N. D., Yuksel, S. S., Kearney, A. M., Brandt, K. & Gosain, A. K., Jan 25 2022, In: Plastic and Reconstructive Surgery - Global Open. 10, 1, p. E4065

  Research output: Contribution to journal › Review article › peer-review

  Open Access

• A Framework for Equitable Partnerships to Promote Cancer Prevention and Control in Rural Settings

  Ko, L. K., Scarinci, I. C., Bouchard, E. G., Drake, B. F., Rodriguez, E. M., Chen, M. S., Kepka, D., Kruse-Diehr, A. J., Befort, C., Shannon, J., Farris, P. E., Trentham-Dietz, A. & Onega, T., Apr 1 2022, In: JNCI Cancer Spectrum. 6, 2, pkac017.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A Framework for Extension Studies Using Real-World Data to Examine Long-Term Safety and Effectiveness

  Burcu, M., Manzano-Salgado, C. B., Butler, A. M. & Christian, J. B., Jan 2022, In: Therapeutic Innovation and Regulatory Science. 56, 1, p. 15-22 8 p.

  Research output: Contribution to journal › Review article › peer-review

  Open Access
  1 Scopus citations

• A Framework of Critical Considerations in Clinical Exome Reanalyses by Clinical and Laboratory Standards Institute

  Leung, M. L., Ji, J., Baker, S., Buchan, J. G., Sivakumaran, T. A., Krock, B. L., Hutchins, R., Bayrak-Toydemir, P., Pfeifer, J., Cremona, M. L., Funke, B. & Santani, A. B., Feb 2022, In: Journal of Molecular Diagnostics. 24, 2, p. 177-188 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A Fully Automated Deep Learning Pipeline for Multi– Vertebral Level Quantification and Characterization of Muscle and Adipose Tissue on Chest CT Scans

  Bridge, C. P., Best, T. D., Wrobel, M. M., Marquardt, J. P., Magudia, K., Javidan, C., Chung, J. H., Kalpathy-Cramer, J., Andriole, K. P. & Fintelmann, F. J., Jan 2022, In: Radiology: Artificial Intelligence. 4, 1, e210080.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• AGA Clinical Practice Guideline on Systemic Therapy for Hepatocellular Carcinoma

  Su, G. L., Altayar, O., O'Shea, R., Shah, R., Estfan, B., Wenzell, C., Sultan, S. & Falck-Ytter, Y., Mar 2022, In: Gastroenterology. 162, 3, p. 920-934 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  7 Scopus citations

• AGA Clinical Practice Update on Management of Medically Refractory Gastroparesis: Expert Review

  Lacy, B. E., Tack, J. & Gyawali, C. P., Mar 2022, In: Clinical Gastroenterology and Hepatology. 20, 3, p. 491-500 10 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• AGA Clinical Practice Update on the Personalized Approach to the Evaluation and Management of GERD: Expert Review

  CGIT GERD Consensus Conference Participants, May 2022, In: Clinical Gastroenterology and Hepatology. 20, 5, p. 984-994.e1

  Research output: Contribution to journal › Article › peer-review

  Open Access
  4 Scopus citations

• AGA Institute Quality Measure Development for Intragastric Balloons in the Management of Obesity

  QUALITY COMMITTEE OF THE AMERICAN GASTROENTEROLOGICAL ASSOCIATION, Aug 2022, In: Gastroenterology. 163, 2, p. 350-353 4 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• AGA Technical Review on Systemic Therapies for Hepatocellular Carcinoma

  Altayar, O., Shah, R., Chang, C. Y., Falck-Ytter, Y. & Muir, A. J., Mar 2022, In: Gastroenterology. 162, 3, p. 937-951 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Age at Initiation of Lower Gastrointestinal Endoscopy and Colorectal Cancer Risk Among US Women

  Ma, W., Wang, M., Wang, K., Cao, Y., Hertzmark, E., Ogino, S., Ng, K., Willett, W. C., Giovannucci, E. L., Song, M. & Chan, A. T., Jul 2022, In: JAMA oncology. 8, 7, p. 986-993 8 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Age-Dependent Reduction in Asthmatic Pathology through Reprogramming of Postviral Inflammatory Responses

  Hazan, G., Eubanks, A., Gierasch, C., Atkinson, J., Fox, C., Hernandez-Leyva, A., Rosen, A. L., Kau, A. L., Agapov, E., Alexander-Brett, J., Steinberg, D., Kelley, D., White, M., Byers, D., Wu, K., Keeler, S. P., Zhang, Y., Koenitzer, J. R., Eiden, E., Anderson, N., & 2 othersHoltzman, M. J. & Haspel, J., Mar 15 2022, In: Journal of immunology (Baltimore, Md. : 1950). 208, 6, p. 1467-1482 16 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Age-dependent white matter disruptions after military traumatic brain injury: Multivariate analysis results from ENIGMA brain injury

  Bouchard, H. C., Sun, D., Dennis, E. L., Newsome, M. R., Disner, S. G., Elman, J., Silva, A., Velez, C., Irimia, A., Davenport, N. D., Sponheim, S. R., Franz, C. E., Kremen, W. S., Coleman, M. J., Williams, M. W., Geuze, E., Koerte, I. K., Shenton, M. E., Adamson, M. M., Coimbra, R., & 11 othersGrant, G., Shutter, L., George, M. S., Zafonte, R. D., McAllister, T. W., Stein, M. B., Thompson, P. M., Wilde, E. A., Tate, D. F., Sotiras, A. & Morey, R. A., Jun 1 2022, In: Human Brain Mapping. 43, 8, p. 2653-2667 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Age-friendly learning health systems: Opportunities for model synergy and care improvement

  Prusaczyk, B. & Burke, R. E., Aug 2022, In: Journal of the American Geriatrics Society. 70, 8, p. 2458-2461 4 p.

  Research output: Contribution to journal › Comment/debate

• A genetically distinct pediatric subtype of primary CNS large B-cell lymphoma is associated with favorable clinical outcome

  Güney, E., Lucas, C. H. G., Qi, Z., Yu, J., Zhang, R., Ohgami, R. S., Rubenstein, J. L., Boué, D. R., Schafernak, K., Wertheim, G. B., Dahiya, S., Giulino-Roth, L., Attarbaschi, A., Barth, M. J., Kothari, S., Abla, O., Cohen, A. L., Mendez, J. S., Bollen, A., Perry, A., & 4 othersTihan, T., Pekmezci, M., Solomon, D. A. & Wen, K. W., May 24 2022, In: Blood Advances. 6, 10, p. 3189-3193 5 p.

  Research output: Contribution to journal › Letter › peer-review

  Open Access

• A genome-wide CRISPR-Cas9 knockout screen identifies essential and growth-restricting genes in human trophoblast stem cells

  Dong, C., Fu, S., Karvas, R. M., Chew, B., Fischer, L. A., Xing, X., Harrison, J. K., Popli, P., Kommagani, R., Wang, T., Zhang, B. & Theunissen, T. W., Dec 2022, In: Nature communications. 13, 1, 2548.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• A genome-wide CRISPR screen identifies HuR as a regulator of apoptosis induced by dsRNA and virus

  Gao, H., Lin, Y., Huang, C., Li, X., Diamond, M. S., Liu, C., Zhang, R. & Zhang, P., Mar 15 2022, In: Journal of cell science. 135, 6

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Age of diagnosis in familial Barrett’s associated neoplasia

  Glamour, B. K., Alaber, O., Cioffi, G., Chandar, A. K., Barnholtz-Sloan, J., Brock, W., Falk, G. W., Canto, M. I., Wang, J. S., Iyer, P. G., Shaheen, N. J., Grady, W. M., Abrams, J. A., Thota, P. N., Chak, A. & Blum, A. E., Jan 2022, In: Familial Cancer. 21, 1, p. 115-120 6 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Age-related changes and longitudinal stability of individual differences in ABCD Neurocognition measures

  Anokhin, A. P., Luciana, M., Banich, M., Barch, D., Bjork, J. M., Gonzalez, M. R., Gonzalez, R., Haist, F., Jacobus, J., Lisdahl, K., McGlade, E., McCandliss, B., Nagel, B., Nixon, S. J., Tapert, S., Kennedy, J. T. & Thompson, W., Apr 2022, In: Developmental Cognitive Neuroscience. 54, 101078.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Age-related disruption of the proteome and acetylome in mouse hearts is associated with loss of function and attenuated by elamipretide (SS-31) and nicotinamide mononucleotide (NMN) treatment

  Whitson, J. A., Johnson, R., Wang, L., Bammler, T. K., Imai, S. I., Zhang, H., Fredrickson, J., Latorre-Esteves, E., Bitto, A., MacCoss, M. J. & Rabinovitch, P. S., Jun 2022, In: GeroScience. 44, 3, p. 1621-1639 19 p.

  Research output: Contribution to journal › Article › peer-review

• Aging with Disability Symptoms and Ability to Participate in, and Satisfaction with, Social Participation among Persons Aged 45–64

  Putnam, M., Morgan, K., Heeb, R., Yan, Y., Chen, S. W. & Stark, S. L., May 2022, In: Healthcare (Switzerland). 10, 5, 903.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A glomerular transcriptomic landscape of apolipoprotein L1 in Black patients with focal segmental glomerulosclerosis

  Nephrotic Syndrome Study Network (NEPTUNE), Jul 2022, In: Kidney International. 102, 1, p. 136-148 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• A Goal-Directed Model of Collaborative Decision Making in Hospice and Palliative Care

  Washington, K. T., Demiris, G., White, P., Mathis, H. C., Forsythe, J. E. & Parker Oliver, D., Apr 2022, In: Journal of Palliative Care. 37, 2, p. 120-124 5 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Agrobacterium species bacteraemia, Switzerland, 2008 to 2019: a molecular epidemiological study

  Balmer, L., Seth-Smith, H. M. B., Egli, A., Casanova, C., Kronenberg, A., Schrenzel, J., Marschall, J. & Sommerstein, R., Dec 2022, In: Antimicrobial Resistance and Infection Control. 11, 1, 47.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• AGS and NIA bench-to bedside conference summary: Cancer and cardiovascular disease

  Mohile, S., Blaum, C. S., Abadir, P. M., Dale, W., Forman, D. E., Fung, C., Holmes, H. M., Moslehi, J., Mustian, K. M., Rich, M. W. & Whitson, H. E., 2022, (Accepted/In press) In: Journal of the American Geriatrics Society.

  Research output: Contribution to journal › Article › peer-review

• A human single-neuron dataset for face perception

  Cao, R., Lin, C., Brandmeir, N. J. & Wang, S., Dec 2022, In: Scientific data. 9, 1, 365.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A Hybrid Approach for Approximating the Ideal Observer for Joint Signal Detection and Estimation Tasks by Use of Supervised Learning and Markov-Chain Monte Carlo Methods

  Li, K., Zhou, W., Li, H. & Anastasio, M. A., May 1 2022, In: IEEE Transactions on Medical Imaging. 41, 5, p. 1114-1124 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Air exchanges, climate change, and severe acute respiratory coronavirus virus 2 (SARS-CoV-2): Results from a survey of the Society of Healthcare Epidemiology of America Research Network (SRN)

  Burnham, J. P., Betz, F., Lautz, R., Mousavi, E., Martinello, R. A., McGain, F. & Sherman, J. D., Mar 11 2022, In: Antimicrobial Stewardship and Healthcare Epidemiology. 2, 1, e40.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A laboratory and simulation platform to integrate individual life history traits and population dynamics

  Scharf, A., Mitteldorf, J., Armstead, B., Schneider, D., Jin, H., Kocsisova, Z., Tan, C. H., Sanchez, F., Brady, B., Ram, N., DiAntonio, G. B., Wilson, A. M. & Kornfeld, K., Feb 2022, In: Nature Computational Science. 2, 2, p. 90-101 12 p.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Alcohol Use Disorder, Psychiatric Comorbidities, Marriage and Divorce in a High-Risk Sample

  Thomas, N. S., Kuo, S. I. C., Aliev, F., McCutcheon, V. V., Meyers, J. M., Chan, G., Hesselbrock, V., Kamarajan, C., Kinreich, S., Kramer, J. R., Kuperman, S., Lai, D., Plawecki, M. H., Porjesz, B., Schuckit, M. A., Dick, D. M., Bucholz, K. K. & Salvatore, J. E., 2022, In: Psychology of Addictive Behaviors. 36, 4, p. 364-374 11 p.

  Research output: Contribution to journal › Article › peer-review

• ALK-positive histiocytosis: a new clinicopathologic spectrum highlighting neurologic involvement and responses to ALK inhibition

  Kemps, P. G., Picarsic, J., Durham, B. H., Hélias-Rodzewicz, Z., Hiemcke-Jiwa, L., van den Bos, C., van de Wetering, M. D., van Noesel, C. J. M., van Laar, J. A. M., Verdijk, R. M., Flucke, U. E., Hogendoorn, P. C. W., Woei-A-Jin, F. J. S. H., Sciot, R., Beilken, A., Feuerhake, F., Ebinger, M., Möhle, R., Fend, F., Bornemann, A., & 61 othersWiegering, V., Ernestus, K., Méry, T., Gryniewicz-Kwiatkowska, O., Dembowska-Baginska, B., Evseev, D. A., Potapenko, V., Baykov, V. V., Gaspari, S., Rossi, S., Gessi, M., Tamburrini, G., Héritier, S., Donadieu, J., Bonneau-Lagacherie, J., Lamaison, C., Farnault, L., Fraitag, S., Jullié, M. L., Haroche, J., Collin, M., Allotey, J., Madni, M., Turner, K., Picton, S., Barbaro, P. M., Poulin, A., Tam, I. S., El Demellawy, D., Empringham, B., Whitlock, J. A., Raghunathan, A., Swanson, A. A., Suchi, M., Brandt, J. M., Yaseen, N. R., Weinstein, J. L., Eldem, I., Sisk, B. A., Sridhar, V., Atkinson, M., Massoth, L. R., Hornick, J. L., Alexandrescu, S., Yeo, K. K., Petrova-Drus, K., Peeke, S. Z., Muñoz-Arcos, L. S., Leino, D. G., Grier, D. D., Lorsbach, R., Roy, S., Kumar, A. R., Garg, S., Tiwari, N., Schafernak, K. T., Henry, M. M., van Halteren, A. G. S., Abla, O., Diamond, E. L. & Emile, J. F., Jan 13 2022, In: Blood. 139, 2, p. 256-280 25 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  9 Scopus citations

• All-Cause Mortality as an End Point for Heart Failure With Preserved Ejection Fraction: Underperformance or Overambitious?

  Goyal, P., Sauer, A. J. & Rich, M. W., May 2022, In: Journal of cardiac failure. 28, 5, p. 863-865 3 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• All-in-focus fine needle aspiration biopsy imaging based on Fourier ptychographic microscopy

  Liang, M., Bernadt, C., Wong, S. B. J., Choi, C., Cote, R. & Yang, C., Jan 2022, In: Journal of Pathology Informatics. 13, 100119.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A long-acting interleukin-7, rhIL-7-hyFc, enhances CAR T cell expansion, persistence, and anti-tumor activity

  Kim, M. Y., Jayasinghe, R., Devenport, J. M., Ritchey, J. K., Rettig, M. P., O’Neal, J., Staser, K. W., Kennerly, K. M., Carter, A. J., Gao, F., Lee, B. H., Cooper, M. L. & DiPersio, J. F., Dec 2022, In: Nature communications. 13, 1, 3296.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations