Yang Li

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Yang Li

Assistant Professor of Neurological Surgery, Assistant Professor of Genetics

 https://orcid.org/0000-0001-6997-6018

    Willing to Mentor

    Available to Mentor:

    PhD/MSTP Students, Postdocs, Residents and Fellows

    • 7972
      Citations
    20122024

    Research activity per year

    Personal profile

    Research interests

    Our research interests include developing innovative computational tools/methods and utilizing single-cell (epi)genomic techniques to gain a comprehensive understanding of gene regulation in mammalian models and human diseases, particularly in brain tumors and neuropsychiatric disorders. 

    Available to Mentor:

    • PhD/MSTP Students
    • Postdocs
    • Residents and Fellows

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    • Author Correction: Conserved and divergent gene regulatory programs of the mammalian neocortex (Nature, (2023), 624, 7991, (390-402), 10.1038/s41586-023-06819-6)

      Zemke, N. R., Armand, E. J., Wang, W., Lee, S., Zhou, J., Li, Y. E., Liu, H., Tian, W., Nery, J. R., Castanon, R. G., Bartlett, A., Osteen, J. K., Li, D., Zhuo, X., Xu, V., Chang, L., Dong, K., Indralingam, H. S., Rink, J. A. & Xie, Y. & 13 others, Miller, M., Krienen, F. M., Zhang, Q., Taskin, N., Ting, J., Feng, G., McCarroll, S. A., Callaway, E. M., Wang, T., Lein, E. S., Behrens, M. M., Ecker, J. R. & Ren, B., Jan 25 2024, In: Nature. 625, 7996, p. E26

      Research output: Contribution to journal › Comment/debate

      Open Access

    • A comparative atlas of single-cell chromatin accessibility in the human brain

      Li, Y. E., Preissl, S., Miller, M., Johnson, N. D., Wang, Z., Jiao, H., Zhu, C., Wang, Z., Xie, Y., Poirion, O., Kern, C., Pinto-Duarte, A., Tian, W., Siletti, K., Emerson, N., Osteen, J., Lucero, J., Lin, L., Yang, Q. & Zhu, Q. & 19 others, Zemke, N., Espinoza, S., Yanny, A. M., Nyhus, J., Dee, N., Casper, T., Shapovalova, N., Hirschstein, D., Hodge, R. D., Linnarsson, S., Bakken, T., Levi, B., Keene, C. D., Shang, J., Lein, E., Wang, A., Behrens, M. M., Ecker, J. R. & Ren, B., Oct 13 2023, In: Science. 382, 6667, adf7044.

      Research output: Contribution to journal › Article › peer-review

      Open Access
      36 Scopus citations

    • A deep population reference panel of tandem repeat variation

      Ziaei Jam, H., Li, Y., DeVito, R., Mousavi, N., Ma, N., Lujumba, I., Adam, Y., Maksimov, M., Huang, B., Dolzhenko, E., Qiu, Y., Kakembo, F. E., Joseph, H., Onyido, B., Adeyemi, J., Bakhtiari, M., Park, J., Javadzadeh, S., Jjingo, D. & Adebiyi, E. & 2 others, Bafna, V. & Gymrek, M., Dec 2023, In: Nature communications. 14, 1, 6711.

      Research output: Contribution to journal › Article › peer-review

      Open Access
      21 Scopus citations

    • A guide to the BRAIN Initiative Cell Census Network data ecosystem

      Hawrylycz, M., Martone, M. E., Ascoli, G. A., Bjaalie, J. G., Dong, H. W., Ghosh, S. S., Gillis, J., Hertzano, R., Haynor, D. R., Hof, P. R., Kim, Y., Lein, E., Liu, Y., Miller, J. A., Mitra, P. P., Mukamel, E., Ng, L., Osumi-Sutherland, D., Peng, H. & Ray, P. L. & 83 others, Sanchez, R., Regev, A., Ropelewski, A., Scheuermann, R. H., Tan, S. Z. K., Thompson, C. L., Tickle, T., Tilgner, H., Varghese, M., Wester, B., White, O., Zeng, H., Aevermann, B., Allemang, D., Ament, S., Athey, T. L., Baker, C., Baker, K. S., Baker, P. M., Bandrowski, A., Banerjee, S., Bishwakarma, P., Carr, A., Chen, M., Choudhury, R., Cool, J., Creasy, H., D'Orazi, F., Degatano, K., Dichter, B., Ding, S. L., Dolbeare, T., Ecker, J. R., Fang, R., Fillion-Robin, J. C., Fliss, T. P., Gee, J., Gillespie, T., Gouwens, N., Zhang, G. Q., Halchenko, Y. O., Harris, N. L., Herb, B. R., Hintiryan, H., Hood, G., Horvath, S., Huo, B., Jarecka, D., Jiang, S., Khajouei, F., Kiernan, E. A., Kir, H., Kruse, L., Lee, C., Lelieveldt, B., Li, Y., Liu, H., Liu, L., Markuhar, A., Mathews, J., Mathews, K. L., Mezias, C., Miller, M. I., Mollenkopf, T., Mufti, S., Mungall, C. J., Orvis, J., Puchades, M. A., Qu, L., Receveur, J. P., Ren, B., Sjoquist, N., Staats, Tward, D., van Velthoven, C. T. J., Wang, Q., Xie, F., Xu, H., Yao, Z., Yun, Z., Zhang, Y. R., Zheng, W. J. & Zingg, B., Jun 2023, In: PLoS biology. 21, 6 June, e3002133.

      Research output: Contribution to journal › Article › peer-review

      Open Access
      15 Scopus citations

    • Conserved and divergent gene regulatory programs of the mammalian neocortex

      Zemke, N. R., Armand, E. J., Wang, W., Lee, S., Zhou, J., Li, Y. E., Liu, H., Tian, W., Nery, J. R., Castanon, R. G., Bartlett, A., Osteen, J. K., Li, D., Zhuo, X., Xu, V., Chang, L., Dong, K., Indralingam, H. S., Rink, J. A. & Xie, Y. & 13 others, Miller, M., Krienen, F. M., Zhang, Q., Taskin, N., Ting, J., Feng, G., McCarroll, S. A., Callaway, E. M., Wang, T., Lein, E. S., Behrens, M. M., Ecker, J. R. & Ren, B., Dec 14 2023, In: Nature. 624, 7991, p. 390-402 13 p.

      Research output: Contribution to journal › Article › peer-review

      Open Access
      25 Scopus citations
    View all 46 Research outputs