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Personal profile

Research interests

We develop genomic technologies and apply systems biology principles to study development.

Keywords

  • COVID-19

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Research Output

  • 4866 Citations
  • 72 Article
  • 3 Comment/debate
  • 2 Review article

A viral toolkit for recording transcription factor-DNA interactions in live mouse tissues

Cammack, A. J., Moudgil, A., Chen, J., Vasek, M. J., Shabsovich, M., McCullough, K., Yen, A., Lagunas, T., Maloney, S. E., He, J., Chen, X., Hooda, M., Wilkinson, M. N., Miller, T. M., Mitra, R. D. & Dougherty, J. D., May 5 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 18, p. 10003-10014 12 p.

Research output: Contribution to journalArticle

  • 1 Scopus citations

    Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses

    Kang, Y., Patel, N. R., Shively, C., Recio, P. S., Chen, X., Wranik, B. J., Kim, G., Scott McIsaac, R., Mitra, R. & Brent, M. R., Jan 1 2020, In : Genome research. 30, 3, p. 459-471 13 p.

    Research output: Contribution to journalArticle

    Open Access
  • 1 Scopus citations
  • Quantitative analysis of transcription factor binding and expression using calling cards reporter arrays

    Liu, J., Shively, C. A. & Mitra, R. D., May 21 2020, In : Nucleic acids research. 48, 9, p. e50

    Research output: Contribution to journalArticle

    Open Access
  • Self-Reporting Transposons Enable Simultaneous Readout of Gene Expression and Transcription Factor Binding in Single Cells

    Moudgil, A., Wilkinson, M. N., Chen, X., He, J., Cammack, A. J., Vasek, M. J., Lagunas, T., Qi, Z., Lalli, M. A., Guo, C., Morris, S., Dougherty, J. & Mitra, R. D., Aug 20 2020, In : Cell. 182, 4, p. 992-1008.e21

    Research output: Contribution to journalArticle

  • 2 Scopus citations