Michael Brent

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Michael Brent

Professor of Computer Science and Engineering, Professor of Biomedical Engineering, Professor of Genetics, Henry Edwin Sever Professor of Engineering

    Willing to Mentor

    Available to Mentor:

    PhD/MSTP Students

    • 35120
      Citations
    1990 …2023

    Research activity per year

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    • 2016

      Past Roadblocks and New Opportunities in Transcription Factor Network Mapping

      Brent, M. R., Nov 1 2016, In: Trends in Genetics. 32, 11, p. 736-750 15 p.

      Research output: Contribution to journal › Review article › peer-review

      18 Scopus citations
    • 2008

      Steady progress and recent breakthroughs in the accuracy of automated genome annotation

      Brent, M. R., Jan 2008, In: Nature Reviews Genetics. 9, 1, p. 62-73 12 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      110 Scopus citations
    • 2006

      Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.

      Bajic, V. B., Brent, M. R., Brown, R. H., Frankish, A., Harrow, J., Ohler, U., Solovyev, V. V. & Tan, S. L., 2006, In: Genome biology. 7 Suppl 1, p. S3.1-13

      Research output: Contribution to journal › Review article › peer-review

      50 Scopus citations
    • 2005

      Genome annotation past, present, and future: How to define an ORF at each locus

      Brent, M. R., Dec 2005, In: Genome research. 15, 12, p. 1777-1786 10 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      95 Scopus citations
    • 2004

      Recent advances in gene structure prediction

      Brent, M. R. & Guigó, R., Jun 2004, In: Current Opinion in Structural Biology. 14, 3, p. 264-272 9 p.

      Research output: Contribution to journal › Review article › peer-review

      95 Scopus citations

    • Reexamining the vocabulary spurt

      Ganger, J. & Brent, M. R., Jul 2004, In: Developmental Psychology. 40, 4, p. 621-632 12 p.

      Research output: Contribution to journal › Review article › peer-review

      148 Scopus citations

    • The ENCODE (ENCyclopedia of DNA Elements) Project

      Feingold, E. A., Good, P. J., Guyer, M. S., Kamholz, S., Liefer, L., Wetterstrand, K., Collins, F. S., Gingeras, T. R., Kampa, D., Sekinger, E. A., Cheng, J., Hirsch, H., Ghosh, S., Zhu, Z., Patel, S., Piccolboni, A., Yang, A., Tammana, H., Bekiranov, S., Kapranov, P., & 177 othersHarrison, R., Church, G., Struhl, K., Ren, B., Kim, T. H., Barrera, L. O., Qu, C., van Calcar, S., Luna, R., Glass, C. K., Rosenfeld, M. G., Guigo, R., Antonarakis, S. E., Birney, E., Brent, M., Pachter, L., Reymond, A., Dermitzakis, E. T., Dewey, C., Keefe, D., Denoeud, F., Lagarde, J., Ashurst, J., Hubbard, T., Wesselink, J. J., Castelo, R., Eyras, E., Myers, R. M., Sidow, A., Batzoglou, S., Trinklein, N. D., Hartman, S. J., Aldred, S. F., Anton, E., Schroeder, D. I., Marticke, S. S., Nguyen, L., Schmutz, J., Grimwood, J., Dickson, M., Cooper, G. M., Stone, E. A., Asimenos, G., Brudno, M., Dutta, A., Karnani, N., Taylor, C. M., Kim, H. K., Robins, G., Stamatoyannopoulos, G., Stamatoyannopoulos, J. A., Dorschner, M., Sabo, P., Hawrylycz, M., Humbert, R., Wallace, J., Yu, M., Navas, P. A., McArthur, M., Noble, W. S., Dunham, I., Koch, C. M., Andrews, R. M., Clelland, G. K., Wilcox, S., Fowler, J. C., James, K. D., Groth, P., Dovey, O. M., Ellis, P. D., Wraight, V. L., Mungall, A. J., Dhami, P., Fiegler, H., Langford, C. F., Carter, N. P., Vetrie, D., Snyder, M., Euskirchen, G., Urban, A. E., Nagalakshmi, U., Rinn, J., Popescu, G., Bertone, P., Hartman, S., Rozowsky, J., Emanuelsson, O., Royce, T., Chung, S., Gerstein, M., Lian, Z., Lian, J., Nakayama, Y., Weissman, S., Stolc, V., Tongprasit, W., Sethi, H., Jones, S., Marra, M., Shin, H., Schein, J., Clamp, M., Lindblad-Toh, K., Chang, J., Jaffe, D. B., Kamal, M., Lander, E. S., Mikkelsen, T. S., Vinson, J., Zody, M. C., de Jong, P. J., Osoegawa, K., Nefedov, M., Zhu, B., Baxevanis, A. D., Wolfsberg, T. G., Crawford, G. E., Whittle, J., Holt, I. E., Vasicek, T. J., Zhou, D., Luo, S., Green, E. D., Bouffard, G. G., Margulies, E. H., Portnoy, M. E., Hansen, N. F., Thomas, P. J., McDowell, J. C., Maskeri, B., Young, A. C., Idol, J. R., Blakesley, R. W., Schuler, G., Miller, W., Hardison, R., Elnitski, L., Shah, P., Salzberg, S. L., Pertea, M., Majoros, W. H., Haussler, D., Thomas, D., Rosenbloom, K. R., Clawson, H., Siepel, A., Kent, W. J., Weng, Z., Jin, S., Halees, A., Burden, H., Karaoz, U., Fu, Y., Yu, Y., Ding, C., Cantor, C. R., Kingston, R. E., Dennis, J., Green, R. D., Singer, M. A., Richmond, T. A., Norton, J. E., Farnham, P. J., Oberley, M. J., Inman, D. R., McCormick, M. R., Kim, H., Middle, C. L., Pirrung, M. C., Fu, X. D., Kwon, Y. S., Ye, Z., Dekker, J., Tabuchi, T. M., Gheldof, N., Dostie, J. & Harvey, S. C., Oct 22 2004, In: Science. 306, 5696, p. 636-640 5 p.

      Research output: Contribution to journal › Review article › peer-review

      1697 Scopus citations
    • 2002

      Predicting full-length transcripts

      Brent, M. R., Jul 1 2002, In: Trends in Biotechnology. 20, 7, p. 273-275 3 p.

      Research output: Contribution to journal › Review article › peer-review

      8 Scopus citations
    • 1999

      Speech segmentation and word discovery: A computational perspective

      Brent, M. R., 1999, In: Trends in Cognitive Sciences. 3, 8, p. 294-301 8 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      94 Scopus citations