Michael Brent

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Michael Brent

Henry Edwin Sever Professor of Engineering, Professor of Computer Science & Engineering, Professor of Biomedical Engineering, Professor of Genetics

 https://orcid.org/0000-0002-8689-0299

    Willing to Mentor

    Available to Mentor:

    PhD/MSTP Students

    • 40705
      Citations
    1990 …2024

    Research activity per year

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    • 2016

      Past Roadblocks and New Opportunities in Transcription Factor Network Mapping

      Brent, M. R., Nov 1 2016, In: Trends in Genetics. 32, 11, p. 736-750 15 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      20 Scopus citations
    • 2008

      Steady progress and recent breakthroughs in the accuracy of automated genome annotation

      Brent, M. R., Jan 2008, In: Nature Reviews Genetics. 9, 1, p. 62-73 12 p.

      Research output: Contribution to journal › Review article › peer-review

      116 Scopus citations
    • 2006

      Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.

      Bajic, V. B., Brent, M. R., Brown, R. H., Frankish, A., Harrow, J., Ohler, U., Solovyev, V. V. & Tan, S. L., 2006, In: Genome biology. 7 Suppl 1, p. S3.1-13

      Research output: Contribution to journal › Review article › peer-review

      57 Scopus citations
    • 2005

      Genome annotation past, present, and future: How to define an ORF at each locus

      Brent, M. R., Dec 2005, In: Genome research. 15, 12, p. 1777-1786 10 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      101 Scopus citations
    • 2004

      Recent advances in gene structure prediction

      Brent, M. R. & Guigó, R., Jun 2004, In: Current Opinion in Structural Biology. 14, 3, p. 264-272 9 p.

      Research output: Contribution to journal › Review article › peer-review

      102 Scopus citations

    • Reexamining the vocabulary spurt

      Ganger, J. & Brent, M. R., Jul 2004, In: Developmental Psychology. 40, 4, p. 621-632 12 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      165 Scopus citations

    • The ENCODE (ENCyclopedia of DNA Elements) Project

      Feingold, E. A., Good, P. J., Guyer, M. S., Kamholz, S., Liefer, L., Wetterstrand, K., Collins, F. S., Gingeras, T. R., Kampa, D., Sekinger, E. A., Cheng, J., Hirsch, H., Ghosh, S., Zhu, Z., Patel, S., Piccolboni, A., Yang, A., Tammana, H., Bekiranov, S. & Kapranov, P. & 177 others, Harrison, R., Church, G., Struhl, K., Ren, B., Kim, T. H., Barrera, L. O., Qu, C., van Calcar, S., Luna, R., Glass, C. K., Rosenfeld, M. G., Guigo, R., Antonarakis, S. E., Birney, E., Brent, M., Pachter, L., Reymond, A., Dermitzakis, E. T., Dewey, C., Keefe, D., Denoeud, F., Lagarde, J., Ashurst, J., Hubbard, T., Wesselink, J. J., Castelo, R., Eyras, E., Myers, R. M., Sidow, A., Batzoglou, S., Trinklein, N. D., Hartman, S. J., Aldred, S. F., Anton, E., Schroeder, D. I., Marticke, S. S., Nguyen, L., Schmutz, J., Grimwood, J., Dickson, M., Cooper, G. M., Stone, E. A., Asimenos, G., Brudno, M., Dutta, A., Karnani, N., Taylor, C. M., Kim, H. K., Robins, G., Stamatoyannopoulos, G., Stamatoyannopoulos, J. A., Dorschner, M., Sabo, P., Hawrylycz, M., Humbert, R., Wallace, J., Yu, M., Navas, P. A., McArthur, M., Noble, W. S., Dunham, I., Koch, C. M., Andrews, R. M., Clelland, G. K., Wilcox, S., Fowler, J. C., James, K. D., Groth, P., Dovey, O. M., Ellis, P. D., Wraight, V. L., Mungall, A. J., Dhami, P., Fiegler, H., Langford, C. F., Carter, N. P., Vetrie, D., Snyder, M., Euskirchen, G., Urban, A. E., Nagalakshmi, U., Rinn, J., Popescu, G., Bertone, P., Hartman, S., Rozowsky, J., Emanuelsson, O., Royce, T., Chung, S., Gerstein, M., Lian, Z., Lian, J., Nakayama, Y., Weissman, S., Stolc, V., Tongprasit, W., Sethi, H., Jones, S., Marra, M., Shin, H., Schein, J., Clamp, M., Lindblad-Toh, K., Chang, J., Jaffe, D. B., Kamal, M., Lander, E. S., Mikkelsen, T. S., Vinson, J., Zody, M. C., de Jong, P. J., Osoegawa, K., Nefedov, M., Zhu, B., Baxevanis, A. D., Wolfsberg, T. G., Crawford, G. E., Whittle, J., Holt, I. E., Vasicek, T. J., Zhou, D., Luo, S., Green, E. D., Bouffard, G. G., Margulies, E. H., Portnoy, M. E., Hansen, N. F., Thomas, P. J., McDowell, J. C., Maskeri, B., Young, A. C., Idol, J. R., Blakesley, R. W., Schuler, G., Miller, W., Hardison, R., Elnitski, L., Shah, P., Salzberg, S. L., Pertea, M., Majoros, W. H., Haussler, D., Thomas, D., Rosenbloom, K. R., Clawson, H., Siepel, A., Kent, W. J., Weng, Z., Jin, S., Halees, A., Burden, H., Karaoz, U., Fu, Y., Yu, Y., Ding, C., Cantor, C. R., Kingston, R. E., Dennis, J., Green, R. D., Singer, M. A., Richmond, T. A., Norton, J. E., Farnham, P. J., Oberley, M. J., Inman, D. R., McCormick, M. R., Kim, H., Middle, C. L., Pirrung, M. C., Fu, X. D., Kwon, Y. S., Ye, Z., Dekker, J., Tabuchi, T. M., Gheldof, N., Dostie, J. & Harvey, S. C., Oct 22 2004, In: Science. 306, 5696, p. 636-640 5 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      1882 Scopus citations
    • 2002

      Predicting full-length transcripts

      Brent, M. R., Jul 1 2002, In: Trends in Biotechnology. 20, 7, p. 273-275 3 p.

      Research output: Contribution to journal › Review article › peer-review

      8 Scopus citations
    • 1999

      Speech segmentation and word discovery: A computational perspective

      Brent, M. R., 1999, In: Trends in Cognitive Sciences. 3, 8, p. 294-301 8 p.

      Research output: Contribution to journal › Review article › peer-review

      Open Access
      99 Scopus citations