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  • 2016

    Past Roadblocks and New Opportunities in Transcription Factor Network Mapping

    Brent, M. R., Nov 1 2016, In: Trends in Genetics. 32, 11, p. 736-750 15 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    19 Scopus citations
  • 2008

    Steady progress and recent breakthroughs in the accuracy of automated genome annotation

    Brent, M. R., Jan 2008, In: Nature Reviews Genetics. 9, 1, p. 62-73 12 p.

    Research output: Contribution to journalReview articlepeer-review

    114 Scopus citations
  • 2006

    Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment.

    Bajic, V. B., Brent, M. R., Brown, R. H., Frankish, A., Harrow, J., Ohler, U., Solovyev, V. V. & Tan, S. L., 2006, In: Genome biology. 7 Suppl 1, p. S3.1-13

    Research output: Contribution to journalReview articlepeer-review

    57 Scopus citations
  • 2005

    Genome annotation past, present, and future: How to define an ORF at each locus

    Brent, M. R., Dec 2005, In: Genome research. 15, 12, p. 1777-1786 10 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    98 Scopus citations
  • 2004

    Recent advances in gene structure prediction

    Brent, M. R. & Guigó, R., Jun 2004, In: Current Opinion in Structural Biology. 14, 3, p. 264-272 9 p.

    Research output: Contribution to journalReview articlepeer-review

    99 Scopus citations
  • Reexamining the vocabulary spurt

    Ganger, J. & Brent, M. R., Jul 2004, In: Developmental Psychology. 40, 4, p. 621-632 12 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    160 Scopus citations
  • The ENCODE (ENCyclopedia of DNA Elements) Project

    Feingold, E. A., Good, P. J., Guyer, M. S., Kamholz, S., Liefer, L., Wetterstrand, K., Collins, F. S., Gingeras, T. R., Kampa, D., Sekinger, E. A., Cheng, J., Hirsch, H., Ghosh, S., Zhu, Z., Patel, S., Piccolboni, A., Yang, A., Tammana, H., Bekiranov, S., Kapranov, P., & 177 othersHarrison, R., Church, G., Struhl, K., Ren, B., Kim, T. H., Barrera, L. O., Qu, C., van Calcar, S., Luna, R., Glass, C. K., Rosenfeld, M. G., Guigo, R., Antonarakis, S. E., Birney, E., Brent, M., Pachter, L., Reymond, A., Dermitzakis, E. T., Dewey, C., Keefe, D., Denoeud, F., Lagarde, J., Ashurst, J., Hubbard, T., Wesselink, J. J., Castelo, R., Eyras, E., Myers, R. M., Sidow, A., Batzoglou, S., Trinklein, N. D., Hartman, S. J., Aldred, S. F., Anton, E., Schroeder, D. I., Marticke, S. S., Nguyen, L., Schmutz, J., Grimwood, J., Dickson, M., Cooper, G. M., Stone, E. A., Asimenos, G., Brudno, M., Dutta, A., Karnani, N., Taylor, C. M., Kim, H. K., Robins, G., Stamatoyannopoulos, G., Stamatoyannopoulos, J. A., Dorschner, M., Sabo, P., Hawrylycz, M., Humbert, R., Wallace, J., Yu, M., Navas, P. A., McArthur, M., Noble, W. S., Dunham, I., Koch, C. M., Andrews, R. M., Clelland, G. K., Wilcox, S., Fowler, J. C., James, K. D., Groth, P., Dovey, O. M., Ellis, P. D., Wraight, V. L., Mungall, A. J., Dhami, P., Fiegler, H., Langford, C. F., Carter, N. P., Vetrie, D., Snyder, M., Euskirchen, G., Urban, A. E., Nagalakshmi, U., Rinn, J., Popescu, G., Bertone, P., Hartman, S., Rozowsky, J., Emanuelsson, O., Royce, T., Chung, S., Gerstein, M., Lian, Z., Lian, J., Nakayama, Y., Weissman, S., Stolc, V., Tongprasit, W., Sethi, H., Jones, S., Marra, M., Shin, H., Schein, J., Clamp, M., Lindblad-Toh, K., Chang, J., Jaffe, D. B., Kamal, M., Lander, E. S., Mikkelsen, T. S., Vinson, J., Zody, M. C., de Jong, P. J., Osoegawa, K., Nefedov, M., Zhu, B., Baxevanis, A. D., Wolfsberg, T. G., Crawford, G. E., Whittle, J., Holt, I. E., Vasicek, T. J., Zhou, D., Luo, S., Green, E. D., Bouffard, G. G., Margulies, E. H., Portnoy, M. E., Hansen, N. F., Thomas, P. J., McDowell, J. C., Maskeri, B., Young, A. C., Idol, J. R., Blakesley, R. W., Schuler, G., Miller, W., Hardison, R., Elnitski, L., Shah, P., Salzberg, S. L., Pertea, M., Majoros, W. H., Haussler, D., Thomas, D., Rosenbloom, K. R., Clawson, H., Siepel, A., Kent, W. J., Weng, Z., Jin, S., Halees, A., Burden, H., Karaoz, U., Fu, Y., Yu, Y., Ding, C., Cantor, C. R., Kingston, R. E., Dennis, J., Green, R. D., Singer, M. A., Richmond, T. A., Norton, J. E., Farnham, P. J., Oberley, M. J., Inman, D. R., McCormick, M. R., Kim, H., Middle, C. L., Pirrung, M. C., Fu, X. D., Kwon, Y. S., Ye, Z., Dekker, J., Tabuchi, T. M., Gheldof, N., Dostie, J. & Harvey, S. C., Oct 22 2004, In: Science. 306, 5696, p. 636-640 5 p.

    Research output: Contribution to journalReview articlepeer-review

    1825 Scopus citations
  • 2002

    Predicting full-length transcripts

    Brent, M. R., Jul 1 2002, In: Trends in Biotechnology. 20, 7, p. 273-275 3 p.

    Research output: Contribution to journalReview articlepeer-review

    8 Scopus citations
  • 1999

    Speech segmentation and word discovery: A computational perspective

    Brent, M. R., 1999, In: Trends in Cognitive Sciences. 3, 8, p. 294-301 8 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    96 Scopus citations