Michael Brent

2003

Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes

Guigó, R., Dermitzakis, E. T., Agarwal, P., Ponting, C. P., Parra, G., Reymond, A., Abril, J. F., Keibler, E., Lyle, R., Ucla, C., Antonarakis, S. E. & Brent, M. R., Feb 4 2003, In: Proceedings of the National Academy of Sciences of the United States of America. 100, 3, p. 1140-1145 6 p.

Research output: Contribution to journal › Article › peer-review

90 Scopus citations

Eval: A software package for analysis of genome annotations

Keibler, E. & Brent, M. R., Oct 17 2003, In: BMC bioinformatics. 4, 50.

Research output: Contribution to journal › Article › peer-review

Open Access

38 Scopus citations

Leveraging the mouse genome for gene prediction in human: from whole-genome shotgun reads to a global synteny map.

Flicek, P., Keibler, E., Hu, P., Korf, I. & Brent, M. R., Jan 2003, In: Genome research. 13, 1, p. 46-54 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

80 Scopus citations

The DNA sequence of human chromosome 7

Hillier, L. D. W., Fulton, R. S., Fulton, L. A., Graves, T. A., Pepin, K. H., Wagner-McPherson, C., Layman, D., Maas, J., Jaeger, S., Walker, R., Wylie, K., Sekhon, M., Becker, M. C., O'Laughlin, M. D., Schaller, M. E., Fewell, G. A., Delehaunty, K. D., Miner, T. L., Nash, W. E., Cordes, M., & 87 othersDu, H., Sun, H., Edwards, J., Bradshaw-Cordum, H., Ali, J., Andrews, S., Isak, A., Van Brunt, A., Nguyen, C., Du, F., Lamar, B., Courtney, L., Kalicki, J., Ozersky, P., Bielicki, L., Scott, K., Holmes, A., Harkins, R., Harris, A., Strong, C. M., Hou, S., Tomlinson, C., Dauphin-Kohlberg, S., Kozlowicz-Reilly, A., Leonard, S., Rohlfing, T., Rock, S. M., Tin-Wollam, A. M., Abbott, A., Minx, P., Maupin, R., Strowmatt, C., Latreille, P., Miller, N., Johnson, D., Murray, J., Woessner, J. P., Wendl, M. C., Yang, S. P., Schultz, B. R., Wallis, J. W., Spieth, J., Bieri, T. A., Nelson, J. O., Berkowicz, N., Wohldmann, P. E., Cook, L. L., Hickenbotham, M. T., Eldred, J., Williams, D., Bedell, J. A., Mardis, E. R., Clifton, S. W., Chissoe, S. L., Marra, M. A., Raymond, C., Haugen, E., Gillett, W., Zhou, Y., James, R., Phelps, K., Iadanoto, S., Bubb, K., Simms, E., Levy, R., Clendenning, J., Kaul, R., Kent, W. J., Furey, T. S., Baertsch, R. A., Brent, M. R., Keibler, E., Flicek, P., Borkk, P., Suyamak, M., Bailey, J. A., Portnoy, M. E., Torrentsk, D., Chinwalla, A. T., Gish, W. R., Eddy, S. R., McPherson, J. D., Olson, M. V., Eichler, E. E., Green, E. D., Waterston, R. H. & Wilson, R. K., Jul 10 2003, In: Nature. 424, 6945, p. 157-164 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

214 Scopus citations

The effects of evolutionary distance on TWINSCAN, an algorithm for pair-wise comparative gene prediction

Wang, M., Buhler, J. & Brent, M. R., 2003, In: Cold Spring Harbor symposia on quantitative biology. 68, p. 125-130 6 p.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics

Stein, L. D., Bao, Z., Blasiar, D., Blumenthal, T., Brent, M. R., Chen, N., Chinwalla, A., Clarke, L., Clee, C., Coghlan, A., Coulson, A., D'Eustachio, P., Fitch, D. H. A., Fulton, L. A., Fulton, R. E., Griffiths-Jones, S., Harris, T. W., Hillier, L. D. W., Kamath, R., Kuwabara, P. E., & 16 othersMardis, E. R., Marra, M. A., Miner, T. L., Minx, P., Mullikin, J. C., Plumb, R. W., Rogers, J., Schein, J. E., Sohrmann, M., Spieth, J., Stajich, J. E., Wei, C., Willey, D., Wilson, R. K., Durbin, R. & Waterston, R. H., Nov 17 2003, In: PLoS biology. 1, 2

Research output: Contribution to journal › Article › peer-review

Open Access

690 Scopus citations

2002

Initial sequencing and comparative analysis of the mouse genome

Waterston, R. H., Lindblad-Toh, K., Birney, E., Rogers, J., Abril, J. F., Agarwal, P., Agarwala, R., Ainscough, R., Alexandersson, M., An, P., Antonarakis, S. E., Attwood, J., Baertsch, R., Bailey, J., Barlow, K., Beck, S., Berry, E., Birren, B., Bloom, T., Bork, P., & 202 othersBotcherby, M., Bray, N., Brent, M. R., Brown, D. G., Brown, S. D., Bult, C., Burton, J., Butler, J., Campbell, R. D., Carninci, P., Cawley, S., Chiaromonte, F., Chinwalla, A. T., Church, D. M., Clamp, M., Clee, C., Collins, F. S., Cook, L. L., Copley, R. R., Coulson, A., Couronne, O., Cuff, J., Curwen, V., Cutts, T., Daly, M., David, R., Davies, J., Delehaunty, K. D., Deri, J., Dermitzakis, E. T., Dewey, C., Dickens, N. J., Diekhans, M., Dodge, S., Dubchak, I., Dunn, D. M., Eddy, S. R., Elnitski, L., Emes, R. D., Eswara, P., Eyras, E., Felsenfeld, A., Fewell, G. A., Flicek, P., Foley, K., Frankel, W. N., Fulton, L. A., Fulton, R. S., Furey, T. S., Gage, D., Gibbs, R. A., Glusman, G., Gnerre, S., Goldman, N., Goodstadt, L., Grafham, D., Graves, T. A., Green, E. D., Gregory, S., Guigó, R., Guyer, M., Hardison, R. C., Haussler, D., Hayashizaki, Y., LaHillier, D. W., Hinrichs, A., Hlavina, W., Holzer, T., Hsu, F., Hua, A., Hubbard, T., Hunt, A., Jackson, I., Jaffe, D. B., Johnson, L. S., Jones, M., Jones, T. A., Joy, A., Kamal, M., Karlsson, E. K., Karolchik, D., Kasprzyk, A., Kawai, J., Keibler, E., Kells, C., Kent, W. J., Kirby, A., Kolbe, D. L., Korf, I., Kucherlapati, R. S., Kulbokas, E. J., Kulp, D., Landers, T., Leger, J. P., Leonard, S., Letunic, I., Levine, R., Li, J., Li, M., Lloyd, C., Lucas, S., Ma, B., Maglott, D. R., Mardis, E. R., Matthews, L., Mauceli, E., Mayer, J. H., McCarthy, M., McCombie, W. R., McLaren, S., McLay, K., McPherson, J. D., Meldrim, J., Meredith, B., Mesirov, J. P., Miller, W., Miner, T. L., Mongin, E., Montgomery, K. T., Morgan, M., Mott, R., Mullikin, J. C., Muzny, D. M., Nash, W. E., Nelson, J. O., Nhan, M. N., Nicol, R., Ning, Z., Nusbaum, C., O'Connor, M. J., Okazaki, Y., Oliver, K., Overton-Larty, E., Pachter, L., Parra, G., Pepin, K. H., Peterson, J., Pevzner, P., Plumb, R., Pohl, C. S., Poliakov, A., Ponce, T. C., Ponting, C. P., Potter, S., Quail, M., Reymond, A., Roe, B. A., Roskin, K. M., Rubin, E. M., Rust, A. G., Santos, R., Sapojnikov, V., Schultz, B., Schultz, J., Schwartz, M. S., Schwartz, S., Scott, C., Seaman, S., Searle, S., Sharpe, T., Sheridan, A., Shownkeen, R., Sims, S., Singer, J. B., Slater, G., Smit, A., Smith, D. R., Spencer, B., Stabenau, A., Stange-Thomann, N., Sugnet, C., Suyama, M., Tesler, G., Thompson, J., Torrents, D., Trevaskis, E., Tromp, J., Ucla, C., Ureta-Vidal, A., Vinson, J. P., von Niederhausern, A. C., Wade, C. M., Wall, M., Weber, R. J., Weiss, R. B., Wendl, M. C., West, A. P., Wetterstrand, K., Wheeler, R., Whelan, S., Wierzbowski, J., Willey, D., Williams, S., Wilson, R. K., Winter, E., Worley, K. C., Wyman, D., Yang, S., Yang, S. P., Zdobnov, E. M., Zody, M. C. & Lander, E. S., Dec 5 2002, In: Nature. 420, 6915, p. 520-562 43 p.

Research output: Contribution to journal › Article › peer-review

Open Access