Personal profile
Research interests
Dr. Ding`s current research focuses on the discovery of genetic changes (somatic and germline) contributing to human diseases by integrating various data types, including DNA, RNA, and proteomics data. Her research team has developed a collection of widely-used computational tools, including VarScan, SomaticSniper, SciClone, BreakDancer, BreakFusion, MSIsensor, Pindel-C, GenomeVIP, HotSpot3D, PathScan, and MuSiC. Dr. Ding plays significant roles in The Cancer Genome Atlas (TCGA), the International Cancer Genome Consortium (ICGC), and the Clinical Proteomic Tumor Analysis Consortium (CPTAC). She co-chairs the TCGA PanCanAtlas Oncogenic Process Group, the TCGA Sarcoma Analysis Working Group, and the ICGC Mutation Calling Group. Dr. Ding also serves on the Steering Committees of the Genomic Data Commons (GDC), CPTAC, and TCGA. Dr. Ding has successfully led many large-scale, multi-institute studies on the genomics of lung adenocarcinomas, AML, and breast cancer. Building on this foundation, her team has produced a series of seminal publications in the fields of cancer genomics research and cancer biology.
Dr. Ding`s lab currently is focusing on understanding tumor microenvironment using new imaging and omics technologies as well as on discovering new cancer treatments using organoid models.
Available to Mentor:
- PhD Students
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Collaborations and top research areas from the last five years
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Biomarkers of response to neoadjuvant palbociclib plus anastrozole in endocrine-resistant estrogen receptor-positive/HER2-negative breast cancer: a phase 2 trial
Kong, T., Mabry, A., Highkin, M., Wang, A. Z., Hoog, J., Guo, Z., Gonzales-Gonzales, A., Thomas, S., Song, Y., Gao, F., Opyrchal, M., Peterson, L., Ademuyiwa, F., Margenthaler, J., Aft, R., Glover-Collins, K., Nehring, L., Tao, Y., Sanati, S. & Hagemann, I. S. & 14 others, , Dec 2026, In: Nature communications. 17, 1, 949.Research output: Contribution to journal › Article › peer-review
Open Access -
Integrative proteogenomic analysis provides molecular insights and clinical significance in gallbladder cancer
Fu, Z., Song, Y., Liu, F., Chen, L., Cai, S., Cui, P., Wang, G., Xie, W., Zhang, S., Ding, L., Wang, P., Zhang, B., Rodriguez, H., Feng, F., Zhang, X., Gong, W., Gao, Q., Gao, D., Zhou, H. & Fan, J., Feb 9 2026, In: Cancer Cell. 44, 2, p. 405-423.e13Research output: Contribution to journal › Article › peer-review
1 Link opens in a new tab Scopus citations -
Introducing Cellular Senescence in Human Induced Pluripotent Stem Cells and Differentiated Neural Lineage for Modeling of Age-Associated Diseases
Neherin, K., Holloway, K., Song, Y., Houston, A., Chen, F., Ding, L. & Zhang, H., Jan 2026, In: Advanced Biology. 10, 1, e00468.Research output: Contribution to journal › Article › peer-review
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Longitudinal Profiling of Tumor and Immune Compartments Uncovers Patterns of Dysregulation and Associations with Response in Multiple Myeloma
Ohlstrom, D. J., Pilcher, W. C., Michaud, M. E., Acharya, C., Satpathy, S., Gonzalez-Kozlova, E., Jayasinghe, R. G., Ferguson, K., Mumme, H. L., Nanda, S., Song, Y., Mantrala, S., Karagkouni, D., Schulman, J., Pabustan, N., Vieira Dos Santos, J., Sherbenou, D. W., Keats, J. J., Gout, A. M. & Foltz, S. & 16 others, , Mar 4 2026, In: Blood cancer discovery. 7, 2, p. 266-286 21 p.Research output: Contribution to journal › Article › peer-review
Open Access -
A Community-Engaged Approach to Enhancing Participation in Genomic Research in Rare and Understudied Cancer Populations
Khan, S., Martin-Giacalone, B., Wallace, K., Wilson, B., Marx, C., Linnenbringer, E., Mozersky, J., Bachini, M., Chollet, N., Stalling, D., Ding, L., Fields, R. C., Colditz, G. A. & Drake, B. F., Oct 2025, In: International journal of environmental research and public health. 22, 10, 1468.Research output: Contribution to journal › Article › peer-review
Open Access