Personal profile
Research interests
Alzheimer’s disease (AD) and Parkinson disease (PD) are the most common neurodegenerative diseases and affect millions of people worldwide. Currently the molecular mechanism of disease pathogenesis remains unclear and there are no therapies can prevent, slow, or halt disease progression. The focus of our lab is on dissecting the molecular mechanism of neurodegeneration through multiple integrated approaches including single nucleus RNA-seq (snRNA-seq), network analysis, genomics, epigenomics and machine learning. Our long-term goal is to provide novel insights into the mechanism of disease pathogenesis and new targets for disease prevention and drug development. Areas of current interest include: 1) Dissect cellular and transcriptomic changes in AD and PD human brains using single nucleus RNA-seq; 2) Understand the relationship between neuroinflammation and selective neuronal death; 3) Computational tool development for single cell ligand-receptor signaling network analysis, transcriptional regulatory network analysis and their application on AD and PD snRNA-seq data. 4) Transcription regulation and AD and PD disease pathogenesis.
Mentoring
I believe that all students and trainees should be given equal opportunity in pursuing scientific training. I have been working with students and trainees regardless of their race, ethnicity, gender, age, religion, abilities or disabilities, sexual orientation, socioeconomic status, or country of origin. Visit us to see for yourself!
Available to Mentor:
- PhD Students
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Collaborations and top research areas from the last five years
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REV-ERB-alpha and -beta coordinately regulate astrocyte reactivity and proteostatic function
Nadarajah, C. J., Li, M. Y., Quillin, E. I., Boyer, K., Dimitry, J. M., Chen, Y., King, M. W., Saliu, I. O., Lee, J., Sheehan, P. W., Davis, A. A., Lazar, M. A., Zhao, G. & Musiek, E. S., Feb 3 2026, In: Proceedings of the National Academy of Sciences of the United States of America. 123, 5, e2511093123.Research output: Contribution to journal › Article › peer-review
Open Access -
Common and specific gene regulatory programs in zebrafish caudal fin regeneration at single-cell resolution
Chen, Y., Hou, Y., Zeng, Q., Wang, I., Shang, M., Shin, K., Hemauer, C., Xing, X., Kang, J., Zhao, G. & Wang, T., Jan 2025, In: Genome research. 35, 1, p. 202-218 17 p.Research output: Contribution to journal › Article › peer-review
Open Access2 Link opens in a new tab Scopus citations -
Human pain neuroscience and the next generation of pain therapeutics
NIH PRECISION Human Pain Network, May 7 2025, In: Neuron. 113, 9, p. 1304-1306 3 p.Research output: Contribution to journal › Comment/debate
Open Access3 Link opens in a new tab Scopus citations -
REV-ERBα regulates brain NAD+ levels and tauopathy via an NFIL3–CD38 axis
Lee, J., Kang, R., Park, S., Saliu, I. O., Son, M., Voorhees, J. R., Dimitry, J. M., Quillin, E. I., Woodie, L. N., Lananna, B. V., Gan, L., Goo, Y. A., Zhao, G., Lazar, M. A., Burris, T. P. & Musiek, E. S., Oct 2025, In: Nature Aging. 5, 10, p. 2070-2085 16 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Link opens in a new tab Scopus citations -
Transcriptomic signatures of host immune responses in aphthous ulcers, the earliest lesions of Crohn's disease, suggest that bacterial uptake, rather than global dysbiosis, is the initiating factor
Whiley, P. J., Dixit, O. V. A., Das Gupta, M., Patel, H., Zhao, G., Connor, S. J., Summers, K. M., Hume, D. A., Pavli, P. & O'Brien, C. L., May 1 2025, In: Immunology and Cell Biology. 103, 5, p. 473-484 12 p.Research output: Contribution to journal › Article › peer-review
Open Access