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  • 2022

    How Powerful are K-hop Message Passing Graph Neural Networks

    Feng, J., Chen, Y., Li, F., Sarkar, A. & Zhang, M., 2022, Advances in Neural Information Processing Systems 35 - 36th Conference on Neural Information Processing Systems, NeurIPS 2022. Koyejo, S., Mohamed, S., Agarwal, A., Belgrave, D., Cho, K. & Oh, A. (eds.). Neural information processing systems foundation, (Advances in Neural Information Processing Systems; vol. 35).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    55 Scopus citations
  • 2016

    DrugMoaMiner: A computational tool for mechanism of action discovery and personalized drug sensitivity prediction

    Li, F., Wang, L., Kong, R., Sheng, J., Cao, H., Mancuso, J., Xia, X., Stephan, C. & Wong, S. T. C., Apr 18 2016, 3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016. Institute of Electrical and Electronics Engineers Inc., p. 368-371 4 p. 7455911. (3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    4 Scopus citations
  • 2014

    An integrated analytic pipeline for identifying and predicting genetic interactions based on perturbation data from high content double RNAi screening

    Yin, Z., Li, F. & Wong, S. T. C., 2014, Proceedings of the XSEDE 2014 Conference: Engaging Communities. Association for Computing Machinery, 7. (ACM International Conference Proceeding Series).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2013

    A novel geodesic distance based clustering approach to delineating boundaries of touching cells

    Chen, X., Zhu, Y., Li, F., Zheng, Z., Chang, E., Ma, J. & Wong, S. T. C., 2013, Advances in Neural Networks, ISNN 2013 - 10th International Symposium on Neural Networks, Proceedings. PART 2 ed. Springer Verlag, p. 315-322 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7952 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    2 Scopus citations
  • 2012

    A 3-dimentional multiscale model to simulate tumor progression in response to interactions between cancer stem cells and tumor microenvironmental factors

    Tan, H., Li, F., Singh, J., Xia, X., Cridebring, D., Yang, J., Zhan, M., Wong, S. T. C., Bao, J. & Ma, J., 2012, 2012 IEEE 6th International Conference on Systems Biology, ISB 2012. p. 297-303 7 p. 6314153. (2012 IEEE 6th International Conference on Systems Biology, ISB 2012).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    7 Scopus citations
  • 2011

    Automated nuclear segmentation of coherent anti-stokes Raman scattering microscopy images by coupling superpixel context information with artificial neural networks

    Hammoudi, A. A., Li, F., Gao, L., Wang, Z., Thrall, M. J., Massoud, Y. & Wong, S. T. C., 2011, Machine Learning in Medical Imaging - Second International Workshop, MLMI 2011, Held in Conjunction with MICCAI 2011, Proceedings. p. 317-325 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7009 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    14 Scopus citations
  • Coupling oriented hidden Markov random field model with local clustering for segmenting blood vessels and measuring spatial structures in images of tumor microenvironment

    Zhu, Y., Li, F., Cridebring, D., Ma, J., Wong, S. T. C., Vadakkan, T. J., Zhang, M., Landua, J., Wei, W., Dickinson, M. E., Rosen, J. M. & Lewis, M. T., 2011, Proceedings - 2011 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011. p. 352-357 6 p. 6120465. (Proceedings - 2011 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    7 Scopus citations
  • Diagnosing lung cancer using coherent anti-Stokes Raman scattering microscopy

    Gao, L., Yang, Y., Xing, J., Thrall, M. J., Wang, Z., Li, F., Luo, P., Wong, K. K., Zhao, H. & Wong, S. T. C., 2011, Advanced Biomedical and Clinical Diagnostic Systems IX. 789015. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7890).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    5 Scopus citations
  • Differential diagnosis of human lung cancer A label-free and chemistry-sensitive approach

    Gao, L., Yang, Y., Xing, J., Thrall, M. J., Wang, Z., Li, F., Luo, P., Wong, K. K. & Wong, S. T. C., 2011, Proceedings of the 2011 IEEE/NIH Life Science Systems and Applications Workshop, LiSSA 2011. p. 14-17 4 p. 5754143. (Proceedings of the 2011 IEEE/NIH Life Science Systems and Applications Workshop, LiSSA 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • 2010

    Optimal live cell tracking for cell cycle study using time-lapse fluorescent microscopy images

    Li, F., Zhou, X. & Wong, S. T. C., 2010, Machine Learning in Medical Imaging - First International Workshop, MLMI 2010, Held in Conjunction with MICCAI 2010, Proceedings. p. 124-131 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6357 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    4 Scopus citations
  • 2009

    Cell segmentation using front vector flow guided active contours

    Li, F., Zhou, X., Zhao, H. & Wong, S. T. C., 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI2009 - 12th International Conference, Proceedings. PART 2 ed. p. 609-616 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5762 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    24 Scopus citations
  • Integrating multi-scale blob/curvilinear detector techniques and multilevel sets for automated segmentation of stem cell images

    Peng, H., Zhou, X., Li, F., Xia, X. & Wong, S. T. C., 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. p. 1362-1365 4 p. 5193318. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    17 Scopus citations
  • 2007

    Differential cytotoxicity of metal oxide nanoparticles

    Chen, J., Zhu, J., Cho, H. H., Cui, K., Li, F., Zhou, X., Rogers, J. T., Wong, S. T. C. & Huang, X., 2007, 2007 NSTI Nanotechnology Conference and Trade Show - NSTI Nanotech 2007, Technical Proceedings. p. 670-673 4 p. (2007 NSTI Nanotechnology Conference and Trade Show - NSTI Nanotech 2007, Technical Proceedings; vol. 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    5 Scopus citations
  • High content image sequence analysis for quantifying calcium signals inside cells with mutant presenilin-1 of familial alzheimer disease

    Li, F., Zhou, X., Zhu, J., Ma, J. & Wong, S. T. C., Jan 1 2007, 2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA. IEEE Computer Society, p. 31-34 4 p. 4400877. (2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Mitosis cell identification with conditional random fields

    Liang, L., Zhou, X., Li, F., Wong, S. T. C., Huckins, J. & King, R. W., 2007, 2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA. IEEE Computer Society, p. 9-12 4 p. 4400872. (2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    24 Scopus citations
  • Novel cell segmentation and online learning algorithms for cell phase identification in automated time-lapse microscopy

    Wang, M., Zhou, X., Li, F., Huckins, J., King, R. W. & Wong, S. T. C., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 65-68 4 p. 4193223. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    22 Scopus citations
  • Novel nuclei segmentation and cell phase identification using Markov model

    Li, F., Zhou, X. & Wong, S. T. C., 2007, Computational Models For Life Sciences (CMLS '07) - 2007 International Symposium. p. 96-103 8 p. (AIP Conference Proceedings; vol. 952).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Online phenotype discovery in high-content RNAi screens using gap statistics

    Yin, Z., Zhou, X., Bakal, C., Li, F., Sun, Y., Perrimon, N. & Wong, S. T. C., 2007, Computational Models For Life Sciences (CMLS '07) - 2007 International Symposium. p. 86-95 10 p. (AIP Conference Proceedings; vol. 952).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • 2006

    Classify cellular phenotype in high-throughput fluorescence microcopy images for RNAi genome-wide screening

    Wang, J., Zhou, X., Li, F. & Wong, S. T. C., 2006, 2006 IEEE/NLM Life Science Systems and Applications Workshop, LiSA 2006. 4015805. (2006 IEEE/NLM Life Science Systems and Applications Workshop, LiSA 2006).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    5 Scopus citations
  • 2005

    MFCC and SVM based recognition of Chinese vowels

    Li, F., Ma, J. & Huang, D., 2005, Computational Intelligence and Security - International Conference, CIS 2005, Proceedings. p. 812-819 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3802 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    20 Scopus citations