Felicia Gomez

2024

A New Era of Data-Driven Cancer Research and Care: Opportunities and Challenges

Gomez, F., Danos, A. M., Del Fiol, G., Madabhushi, A., Tiwari, P., McMichael, J. F., Bakas, S., Bian, J., Davatzikos, C., Fertig, E. J., Kalpathy-Cramer, J., Kenney, J., Savova, G. K., Yetisgen, M., Van Allen, E. M., Warner, J. L., Prior, F., Griffith, M. & Griffith, O. L., Oct 1 2024, In: Cancer discovery. 14, 10, p. 1774-1778 5 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Neoantigen landscape supports feasibility of personalized cancer vaccine for follicular lymphoma

Ramirez, C. A., Becker-Hapak, M., Singhal, K., Russler-Germain, D. A., Frenkel, F., Barnell, E. K., McClain, E. D., Desai, S., Schappe, T., Onyeador, O. C., Kudryashova, O., Belousov, V., Bagaev, A., Ocheredko, E., Kiwala, S., Hundal, J., Skidmore, Z. L., Watkins, M. P., Mooney, T. B. & Walker, J. R. & 13 others, Krysiak, K., Gomez, F., Fronick, C. C., Fulton, R. S., Schreiber, R. D., Mehta-Shah, N., Cashen, A. F., Kahl, B. S., Ataullakhanov, R., Bartlett, N. L., Griffith, M., Griffith, O. L. & Fehniger, T. A., Aug 13 2024, In: Blood Advances. 8, 15, p. 4035-4049 15 p.

Research output: Contribution to journal › Article › peer-review

Open Access

3 Scopus citations

2023

Mutations associated with progression in follicular lymphoma predict inferior outcomes at diagnosis: Alliance A151303

Russler-Germain, D. A., Krysiak, K., Ramirez, C., Mosior, M., Watkins, M. P., Gomez, F., Skidmore, Z. L., Trani, L., Gao, F., Geyer, S., Cashen, A. F., Mehta-Shah, N., Kahl, B. S., Bartlett, N. L., Alderuccio, J. P., Lossos, I. S., Ondrejka, S. L., Hsi, E. D., Martin, P. & Leonard, J. P. & 3 others, Griffith, M., Griffith, O. L. & Fehniger, T. A., Sep 26 2023, In: Blood Advances. 7, 18, p. 5524-5539 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

11 Scopus citations

Ultra-Deep Sequencing Reveals the Mutational Landscape of Classical Hodgkin Lymphoma

Gomez, F., Fisk, B., McMichael, J. F., Mosior, M., Foltz, J. A., Skidmore, Z. L., Duncavage, E. J., Miller, C. A., Abel, H., Li, Y. S., Russler-Germain, D. A., Krysiak, K., Watkins, M. P., Ramirez, C. A., Schmidt, A., Rodrigues, F. M., Trani, L., Khanna, A., Wagner, J. A. & Fulton, R. S. & 11 others, Fronick, C. C., O'Laughlin, M. D., Schappe, T., Cashen, A. F., Mehta-Shah, N., Kahl, B. S., Walker, J., Bartlett, N. L., Griffith, M., Fehniger, T. A. & Griffith, O. L., Nov 2023, In: Cancer research communications. 3, 11, p. 2312-2330 19 p.

Research output: Contribution to journal › Article › peer-review

Open Access

9 Scopus citations

2022

Phase 1/dose expansion trial of brentuximab vedotin and lenalidomide in relapsed or refractory diffuse large B-cell lymphoma

Ward, J. P., Berrien-Elliott, M. M., Gomez, F., Luo, J., Becker-Hapak, M., Cashen, A. F., Wagner-Johnston, N. D., Maddocks, K., Mosior, M., Foster, M., Krysiak, K., Schmidt, A., Skidmore, Z. L., Desai, S., Watkins, M. P., Fischer, A., Griffith, M., Griffith, O. L., Fehniger, T. A. & Bartlett, N. L., Mar 31 2022, In: Blood. 139, 13, p. 1999-2010 12 p.

Research output: Contribution to journal › Article › peer-review

21 Scopus citations

2021

Genetic ancestry correlations with driver mutations suggest complex interactions between somatic and germline variation in cancer

Gomez, F., Griffith, M. & Griffith, O. L., Mar 2021, In: Cancer discovery. 11, 3, p. 534-536 3 p.

Research output: Contribution to journal › Article › peer-review

Open Access

4 Scopus citations

2019

Standard operating procedure for somatic variant refinement of sequencing data with paired tumor and normal samples

Barnell, E. K., Ronning, P., Campbell, K. M., Krysiak, K., Ainscough, B. J., Sheta, L. M., Pema, S. P., Schmidt, A. D., Richters, M., Cotto, K. C., Danos, A. M., Ramirez, C., Skidmore, Z. L., Spies, N. C., Hundal, J., Sediqzad, M. S., Kunisaki, J., Gomez, F., Trani, L. & Matlock, M. & 4 others, Wagner, A. H., Swamidass, S. J., Griffith, M. & Griffith, O. L., Apr 1 2019, In: Genetics in Medicine. 21, 4, p. 972-981 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

57 Scopus citations

2018

Single-agent ibrutinib in relapsed or refractory follicular lymphoma: A phase 2 consortium trial

Bartlett, N. L., Costello, B. A., LaPlant, B. R., Ansell, S. M., Kuruvilla, J. G., Reeder, C. B., Thye, L. S., Anderson, D. M., Krysiak, K., Ramirez, C., Qi, J., Siegel, B. A., Griffith, M., Griffith, O. L., Gomez, F. & Fehniger, T. A., Jan 11 2018, In: Blood. 131, 2, p. 182-190 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

123 Scopus citations

2017

1000 Genomes-based metaanalysis identifies 10 novel loci for kidney function

Gorski, M., Van Der Most, P. J., Teumer, A., Chu, A. Y., Li, M., Mijatovic, V., Nolte, I. M., Cocca, M., Taliun, D., Gomez, F., Li, Y., Tayo, B., Tin, A., Feitosa, M. F., Aspelund, T., Attia, J., Biffar, R., Bochud, M., Boerwinkle, E. & Borecki, I. & 106 others, Bottinger, E. P., Chen, M. H., Chouraki, V., Ciullo, M., Coresh, J., Cornelis, M. C., Curhan, G. C., D'Adamo, A. P., Dehghan, A., Dengler, L., Ding, J., Eiriksdottir, G., Endlich, K., Enroth, S., Esko, T., Franco, O. H., Gasparini, P., Gieger, C., Girotto, G., Gottesman, O., Gudnason, V., Gyllensten, U., Hancock, S. J., Harris, T. B., Helmer, C., Höllerer, S., Hofer, E., Hofman, A., Holliday, E. G., Homuth, G., Hu, F. B., Huth, C., Hutri-Kähönen, N., Hwang, S. J., Imboden, M., Johansson, A., Kähönen, M., König, W., Kramer, H., Krämer, B. K., Kumar, A., Kutalik, Z., Lambert, J. C., Launer, L. J., Lehtimäki, T., De Borst, M. H., Navis, G., Swertz, M., Liu, Y., Lohman, K., Loos, R. J. F., Lu, Y., Lyytikäinen, L. P., McEvoy, M. A., Meisinger, C., Meitinger, T., Metspalu, A., Metzger, M., Mihailov, E., Mitchell, P., Nauck, M., Oldehinkel, A. J., Olden, M., Penninx, B. W. J. H., Pistis, G., Pramstaller, P. P., Probst-Hensch, N., Raitakari, O. T., Rettig, R., Ridker, P. M., Rivadeneira, F., Robino, A., Rosas, S. E., Ruderfer, D., Ruggiero, D., Saba, Y., Sala, C., Schmidt, H., Schmidt, R., Scott, R. J., Sedaghat, S., Smith, A. V., Sorice, R., Stengel, B., Stracke, S., Strauch, K., Toniolo, D., Uitterlinden, A. G., Ulivi, S., Viikari, J. S., Völker, U., Vollenweider, P., Völzke, H., Vuckovic, D., Waldenberger, M., Wang, J. J., Yang, Q., Chasman, D. I., Tromp, G., Snieder, H., Heid, I. M., Fox, C. S., Köttgen, A., Pattaro, C., Böger, C. A. & Fuchsberger, C., 2017, In: Scientific reports. 7, 45040.

Research output: Contribution to journal › Article › peer-review

Open Access

93 Scopus citations

Corrigendum: 1000 Genomes-based meta-analysis identifies 10 novel loci for kidney function

Gorski, M., Most, P. J. V. D., Teumer, A., Chu, A. Y., Li, M., Mijatovic, V., Nolte, I. M., Cocca, M., Taliun, D., Gomez, F., Li, Y., Tayo, B., Tin, A., Feitosa, M. F., Aspelund, T., Attia, J., Biffar, R., Bochud, M., Boerwinkle, E. & Borecki, I. & 106 others, Bottinger, E. P., Chen, M. H., Chouraki, V., Ciullo, M., Coresh, J., Cornelis, M. C., Curhan, G. C., Adamo, A. P. D., Dehghan, A., Dengler, L., Ding, J., Eiriksdottir, G., Endlich, K., Enroth, S., Esko, T., Franco, O. H., Gasparini, P., Gieger, C., Girotto, G., Gottesman, O., Gudnason, V., Gyllensten, U., Hancock, S. J., Harris, T. B., Helmer, C., Höllerer, S., Hofer, E., Hofman, A., Holliday, E. G., Homuth, G., Hu, F. B., Huth, C., Hutri-Kähönen, N., Hwang, S. J., Imboden, M., Johansson, Å., Kähönen, M., König, W., Kramer, H., Krämer, B. K., Kumar, A., Kutalik, Z., Lambert, J. C., Launer, L. J., Lehtimäki, T., de Borst, M. H., Navis, G., Swertz, M., Liu, Y., Lohman, K., Loos, R. J. F., Lu, Y., Lyytikäinen, L. P., McEvoy, M. A., Meisinger, C., Meitinger, T., Metspalu, A., Metzger, M., Mihailov, E., Mitchell, P., Nauck, M., Oldehinkel, A. J., Olden, M., Wjh Penninx, B., Pistis, G., Pramstaller, P. P., Probst-Hensch, N., Raitakari, O. T., Rettig, R., Ridker, P. M., Rivadeneira, F., Robino, A., Rosas, S. E., Ruderfer, D., Ruggiero, D., Saba, Y., Sala, C., Schmidt, H., Schmidt, R., Scott, R. J., Sedaghat, S., Smith, A. V., Sorice, R., Stengel, B., Stracke, S., Strauch, K., Toniolo, D., Uitterlinden, A. G., Ulivi, S., Viikari, J. S., Völker, U., Vollenweider, P., Völzke, H., Vuckovic, D., Waldenberger, M., Wang, J. J., Yang, Q., Chasman, D. I., Tromp, G., Snieder, H., Heid, I. M., Fox, C. S., Köttgen, A., Pattaro, C., Böger, C. A. & Fuchsberger, C., May 26 2017, In: Scientific reports. 7, p. 46835 1 p., 46835.

Research output: Contribution to journal › Comment/debate

Open Access

1 Scopus citations

Recurrent somatic mutations affecting B-cell receptor signaling pathway genes in follicular lymphoma

Krysiak, K., Gomez, F., White, B. S., Matlock, M., Miller, C. A., Trani, L., Fronick, C. C., Fulton, R. S., Kreisel, F., Cashen, A. F., Carson, K., Berrien-Elliott, M. M., Bartlett, N. L., Griffith, M., Griffith, O. L. & Fehniger, T. A., Jan 26 2017, In: Blood. 129, 4, p. 473-483 11 p.

Research output: Contribution to journal › Article › peer-review

Open Access

144 Scopus citations

2015

Admixture mapping of coronary artery calcification in African Americans from the NHLBI family heart study

Gomez, F., Wang, L., Abel, H., Zhang, Q., Province, M. A. & Borecki, I. B., Apr 23 2015, In: BMC genetics. 16, 1, 42.

Research output: Contribution to journal › Article › peer-review

Open Access

9 Scopus citations

Parent-of-Origin Effects of the APOB Gene on Adiposity in Young Adults

Hochner, H., Allard, C., Granot-Hershkovitz, E., Chen, J., Sitlani, C. M., Sazdovska, S., Lumley, T., McKnight, B., Rice, K., Enquobahrie, D. A., Meigs, J. B., Kwok, P., Hivert, M. F., Borecki, I. B., Gomez, F., Wang, T., van Duijn, C., Amin, N., Rotter, J. I. & Stamatoyannopoulos, J. & 5 others, Meiner, V., Manor, O., Dupuis, J., Friedlander, Y. & Siscovick, D. S., 2015, In: PLoS genetics. 11, 10, e1005573.

Research output: Contribution to journal › Article › peer-review

Open Access

15 Scopus citations

Selection of models for the analysis of risk-factor trees: Leveraging biological knowledge to mine large sets of risk factors with application to microbiome data

Zhang, Q., Abel, H., Wells, A., Lenzini, P., Gomez, F., Province, M. A., Templeton, A. A., Weinstock, G. M., Salzman, N. H. & Borecki, I. B., May 15 2015, In: Bioinformatics. 31, 10, p. 1607-1613 7 p.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Scopus citations

2014

Genetic variation and adaptation in Africa: Implications for human evolution and disease

Gomez, F., Hirbo, J. & Tishkoff, S. A., Jul 2014, In: Cold Spring Harbor perspectives in biology. 6, 7, a008524.

Research output: Contribution to journal › Article › peer-review

Open Access

99 Scopus citations

Novel approach identifies SNPs in SLC2A10 and KCNK9 with evidence for parent-of-origin effect on body mass index

Generation Scotland Consortium, The LifeLines Cohort study, The GIANT Consortium, Hoggart, C. J., Venturini, G., Mangino, M., Gomez, F., Ascari, G., Zhao, J. H., Teumer, A., Winkler, T. W., Tšernikova, N., Luan, J., Mihailov, E., Ehret, G. B., Zhang, W., Lamparter, D., Esko, T., Macé, A. & Rüeger, S. & 33 others, Bochud, P. Y., Barcella, M., Dauvilliers, Y., Benyamin, B., Evans, D. M., Hayward, C., Lopez, M. F., Franke, L., Russo, A., Heid, I. M., Salvi, E., Vendantam, S., Arking, D. E., Boerwinkle, E., Chambers, J. C., Fiorito, G., Grallert, H., Guarrera, S., Homuth, G., Huffman, J. E., Porteous, D., Moradpour, D., Iranzo, A., Hebebrand, J., Kemp, J. P., Lammers, G. J., Aubert, V., Heim, M. H., Martin, N. G., Heath, A. C., Kraja, A. T., Madden, P. A. & Province, M. A., Jan 1 2014, In: PLoS genetics. 10, 7, p. 1-12 12 p., e1004508.

Research output: Contribution to journal › Article › peer-review

Open Access

52 Scopus citations

2013

Erratum: Identifying darwinian selection acting on different human APOL1 variants among diverse African populations (American Journal of Human Genetics (2013) 93 (54-66))

Ko, W. Y., Rajan, P., Gomez, F., Scheinfeldt, L., An, P., Winkler, C. A., Froment, A., Nyambo, T. B., Omar, S. A., Wambebe, C., Ranciaro, A., Hirbo, J. B. & Tishkoff, S. A., Jul 11 2013, In: American journal of human genetics. 93, 1, p. 191 1 p.

Research output: Contribution to journal › Comment/debate

Open Access

Identifying darwinian selection acting on different human apol1 variants among diverse african populations

Ko, W. Y., Rajan, P., Gomez, F., Scheinfeldt, L., An, P., Winkler, C. A., Froment, A., Nyambo, T. B., Omar, S. A., Wambebe, C., Ranciaro, A., Hirbo, J. B. & Tishkoff, S. A., Jul 11 2013, In: American journal of human genetics. 93, 1, p. 54-66 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

84 Scopus citations

Impact of natural selection due to malarial disease on human genetic variation

Gomez, F., Ko, W. Y., Davis, A. & Tishkoff, S. A., Jan 1 2013, Primates, Pathogens, and Evolution. Springer New York, p. 117-160 44 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

4 Scopus citations

Patterns of nucleotide and haplotype diversity at ICAM-1 across global human populations with varying levels of malaria exposure

Gomez, F., Tomas, G., Ko, W. Y., Ranciaro, A., Froment, A., Ibrahim, M., Lema, G., Nyambo, T. B., Omar, S. A., Wambebe, C., Hirbo, J. B., Rocha, J. & Tishkoff, S. A., Sep 2013, In: Human genetics. 132, 9, p. 987-999 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Scopus citations

2012

Gene-Centric Meta-Analysis of Lipid Traits in African, East Asian and Hispanic Populations

Elbers, C. C., Guo, Y., Tragante, V., van Iperen, E. P. A., Lanktree, M. B., Castillo, B. A., Chen, F., Yanek, L. R., Wojczynski, M. K., Li, Y. R., Ferwerda, B., Ballantyne, C. M., Buxbaum, S. G., Chen, Y. D. I., Chen, W. M., Cupples, L. A., Cushman, M., Duan, Y., Duggan, D. & Evans, M. K. & 50 others, Fernandes, J. K., Fornage, M., Garcia, M., Garvey, W. T., Glazer, N., Gomez, F., Harris, T. B., Halder, I., Howard, V. J., Keller, M. F., Kamboh, M. I., Kooperberg, C., Kritchevsky, S. B., LaCroix, A., Liu, K., Liu, Y., Musunuru, K., Newman, A. B., Onland-Moret, N. C., Ordovas, J., Peter, I., Post, W., Redline, S., Reis, S. E., Saxena, R., Schreiner, P. J., Volcik, K. A., Wang, X., Yusuf, S., Zonderland, A. B., Anand, S. S., Becker, D. M., Psaty, B., Rader, D. J., Reiner, A. P., Rich, S. S., Rotter, J. I., Sale, M. M., Tsai, M. Y., Borecki, I. B., Hegele, R. A., Kathiresan, S., Nalls, M. A., Taylor, H. A., Hakonarson, H., Sivapalaratnam, S., Asselbergs, F. W., Drenos, F., Wilson, J. G. & Keating, B. J., Dec 7 2012, In: PloS one. 7, 12, e50198.

Research output: Contribution to journal › Article › peer-review

Open Access

38 Scopus citations

Felicia Gomez

Research output

Search results