Daofeng Li

10912

Citations

Research activity per year

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70 Article
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An integrated view of the structure and function of the human 4D nucleome
Dekker, J., Oksuz, B. A., Zhang, Y., Wang, Y., Minsk, M. K., Kuang, S., Yang, L., Gibcus, J. H., Krietenstein, N., Rando, O. J., Xu, J., Janssens, D. H., Henikoff, S., Kukalev, A., Andréa, W., Winick-Ng, W., Kempfer, R., Pombo, A., Yu, M. & Kumar, P. & 70 others, Zhang, L., Belmont, A. S., Sasaki, T., van Schaik, T., Brueckner, L., Peric-Hupkes, D., van Steensel, B., Wang, P., Chai, H., Kim, M., Ruan, Y., Zhang, R., Quinodoz, S. A., Bhat, P., Guttman, M., Zhao, W., Chien, S., Liu, Y., Venev, S. V., Plewczynski, D., Azcarate, I. I., Szabó, D., Thieme, C. J., Szczepińska, T., Chiliński, M., Sengupta, K., Conte, M., Esposito, A., Abraham, A., Zhang, R., Wang, Y., Wen, X., Wu, Q., Yang, Y., Liu, J., Boninsegna, L., Yildirim, A., Zhan, Y., Chiariello, A. M., Bianco, S., Lee, L., Hu, M., Li, Y., Barnett, R. J., Cook, A. L., Emerson, D. J., Marchal, C., Zhao, P., Park, P. J., Alver, B. H., Schroeder, A. J., Navelkar, R., Bakker, C., Ronchetti, W., Ehmsen, S., Veit, A. D., Gehlenborg, N., Wang, T., Li, D., Wang, X., Nicodemi, M., Ren, B., Zhong, S., Phillips-Cremins, J. E., Gilbert, D. M., Pollard, K. S., Alber, F., Ma, J., Noble, W. S. & Yue, F., Jan 15 2026, In: Nature. 649, 8097, p. 759-776 18 p.
Research output: Contribution to journal › Article › peer-review

Open Access
28 Link opens in a new tab Scopus citations
Benchmarking genome choice in functional genomics analyses
Human Pangenome Reference Consortium, Dec 2026, In: Nature communications. 17, 1, 6837.
Research output: Contribution to journal › Article › peer-review

Open Access
Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources
Human Pangenome Reference Consortium, Jun 2026, In: Genome research. 36, 6, p. 1108-1124 17 p.
Research output: Contribution to journal › Article › peer-review

Open Access
Population differences of chromosome 22q11.2 duplication structure predispose differentially to microdeletion and inversion
Human Pangenome Reference Consortium, Dec 2026, In: Nature communications. 17, 1, 3701.
Research output: Contribution to journal › Article › peer-review

Open Access
1 Link opens in a new tab Scopus citations
SNP calling, haplotype phasing and allele-specific analysis with long RNA-seq reads
Human Pangenome Reference Consortium, 2026, (Accepted/In press) In: Nature Methods.
Research output: Contribution to journal › Article › peer-review
2 Link opens in a new tab Scopus citations

Daofeng Li

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Collaborations and top research areas from the last five years

Dive into details

An integrated view of the structure and function of the human 4D nucleome

Benchmarking genome choice in functional genomics analyses

Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources

Population differences of chromosome 22q11.2 duplication structure predispose differentially to microdeletion and inversion

SNP calling, haplotype phasing and allele-specific analysis with long RNA-seq reads

Daofeng Li

Fingerprint

Collaborations and top research areas from the last five years

Research output

An integrated view of the structure and function of the human 4D nucleome

Benchmarking genome choice in functional genomics analyses

Characterizing cytosine methylation of polymorphic transposable element insertions using the human pangenome resources

Population differences of chromosome 22q11.2 duplication structure predispose differentially to microdeletion and inversion

SNP calling, haplotype phasing and allele-specific analysis with long RNA-seq reads