Washington University School of Medicine

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  • 2008

    A novel 3D micro membrane filtration device for capture viable rare circulating tumor cells from whole blood

    Zheng, S., Lin, H. K., Cote, R. J. & Tai, Y. C., 2008, 2008 Solid-State Sensors, Actuators, and Microsystems Workshop. Turner, K. L. & Spangler, L. (eds.). Transducer Research Foundation, p. 134-137 4 p. (Technical Digest - Solid-State Sensors, Actuators, and Microsystems Workshop).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    6 Scopus citations

  • A novel mixed-integer linear optimization framework for the identification of post-translationally modified proteins using ETD/ECD tandem mass spectrometry

    Dimaggio, P. A., Baliban, R., Garcia, B. A. & Floudas, C. A., 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • A pre-clinical test platform for evaluating meniscal repair scaffolds

    Wright, T., Bonassar, L., Gleghorn, J., Brophy, R., Cottrell, J., Rodeo, S., Warren, R. & Maher, S., 2008, 8th World Biomaterials Congress 2008. p. 1647 1 p. (8th World Biomaterials Congress 2008; vol. 3).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • A roadmap for caGrid, an enterprise Grid architecture for biomedical research

    Saltz, J., Hastings, S., Langella, S., Oster, S., Kurc, T., Payne, P., Ferreira, R., Plale, B., Goble, C., Ervin, D., Sharma, A., Pan, T., Permar, J., Brezany, P., Siebenlist, F., Madduri, R., Foster, I., Shanbhag, K., Mead, C. & Hong, N. C., 2008, Global Healthgrid: E-Science Meets Biomedical Informatics - Proceedings of HealthGrid 2008. IOS Press, p. 224-237 14 p. (Studies in Health Technology and Informatics; vol. 138).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • A sun SPOT based automatic vehicular accident notification system

    Acharya, D., Kumar, V., Garvin, N., Greca, A. & Gaddis, G. M., 2008, 5th Int. Conference on Information Technology and Applications in Biomedicine, ITAB 2008 in conjunction with 2nd Int. Symposium and Summer School on Biomedical and Health Engineering, IS3BHE 2008. p. 296-299 4 p. 4570547. (5th Int. Conference on Information Technology and Applications in Biomedicine, ITAB 2008 in conjunction with 2nd Int. Symposium and Summer School on Biomedical and Health Engineering, IS3BHE 2008).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • A two-level kinetic model for Rotational-Translational relaxations in a diatomic gas

    Cheremisin, F. G., Chen, R. & Agarwal, R. K., 2008, 40th AIAA Thermophysics Conference. American Institute of Aeronautics and Astronautics Inc., 2008-3932. (40th AIAA Thermophysics Conference).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Automated gland and nuclei segmentation for grading of prostate and breast cancer histopathology

    Naik, S., Doyle, S., Agner, S., Madabhushi, A., Feldman, M. & Tomaszewski, J., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 284-287 4 p. 4540988. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    293 Scopus citations

  • Automated grading of breast cancer histopathology using spectral clustering with textural and architectural image features

    Doyle, S., Agner, S., Madabhushi, A., Feldman, M. & Tomaszewski, J., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 496-499 4 p. 4541041. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    259 Scopus citations

  • Bat-inspired adaptive design of waveform and trajectory for radar

    Hurtado, M. & Nehorai, A., 2008, 2008 42nd Asilomar Conference on Signals, Systems and Computers, ASILOMAR 2008. p. 36-40 5 p. 5074355. (Conference Record - Asilomar Conference on Signals, Systems and Computers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    13 Scopus citations

  • Biochemical transport modeling, estimation and detection in realistic environments

    Ortner, M. & Nehorai, A., 2008, 2008 IEEE International Conference on Acoustics, Speech and Signal Processing, ICASSP. p. 5169-5172 4 p. 4518823. (ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Biohybrid nanoparticles and hydrogel platforms with on-demand release of therapeutics by the application of nucleic acid triggers

    Venkatesh, S., Wower, J. & Byrne, M. E., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Calibration and characterization of self-powered floating-gate sensor arrays for long-term fatigue monitoring

    Lajnef, N., Chakrabartty, S. & Elvin, N. G., 2008, 2008 IEEE International Symposium on Circuits and Systems, ISCAS 2008. p. 1096-1099 4 p. 4541613. (Proceedings - IEEE International Symposium on Circuits and Systems).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Classification of gene expression profiles: comparison of K-means and expectation maximization algorithms

    Rubio-Escudero, C., Martínez-Álvarez, F., Romero-Zaliz, R. & Zwir, I., 2008, Proceedings - 8th International Conference on Hybrid Intelligent Systems, HIS 2008. p. 831-836 6 p. 4626734. (Proceedings - 8th International Conference on Hybrid Intelligent Systems, HIS 2008).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    12 Scopus citations

  • Computation of hypersonic shock structure in diatomic gases with rotational and vibrational relaxation using the Generalized Boltzmann Equation

    Cheremisin, F. G. & Agarwal, R. K., 2008, 46th AIAA Aerospace Sciences Meeting and Exhibit. American Institute of Aeronautics and Astronautics Inc., 2008-1269. (46th AIAA Aerospace Sciences Meeting and Exhibit).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Computation of slip flow in microchannels with wall roughness

    Pinzon, C. F. & Agarwal, R. K., 2008, 38th AIAA Fluid Dynamics Conference and Exhibit. American Institute of Aeronautics and Astronautics Inc., 2008-4276. (38th AIAA Fluid Dynamics Conference and Exhibit).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Computer aided simulation and verification of forward error-correcting biosensors

    Liu, Y. & Chakrabartty, S., 2008, 2008 IEEE International Symposium on Circuits and Systems, ISCAS 2008. p. 1826-1829 4 p. 4541795. (Proceedings - IEEE International Symposium on Circuits and Systems).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Computer simulation of vestibuloocular reflex motor learning using a realistic cerebellar cortical neuronal network model

    Inagaki, K., Hirata, Y., Blazquez, P. M. & Highstein, S. M., Oct 27 2008, Neural Information Processing - 14th International Conference, ICONIP 2007, Revised Selected Papers. PART 1 ed. p. 902-912 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4984 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Consecutive KEGG pathway models for the interpretation of high-throughput genomics data

    Antonov, A. V., Dietmann, S. & Mewes, H. W., 2008, Proceedings of the German Conference on Bioinformatics, GCB 2008. p. 1-9 9 p. (Proceedings of the German Conference on Bioinformatics, GCB 2008).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Controlling diurnal rhythms by light

    Ghosh, B. K., Pakrasi, H. B. & Elvitigala, T. R., 2008, 2008 10th International Conference on Control, Automation, Robotics and Vision, ICARCV 2008. p. 1367-1372 6 p. 4795722. (2008 10th International Conference on Control, Automation, Robotics and Vision, ICARCV 2008).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • CRF-OPT: An efficient high-quality conditional random field solver

    Chen, M., Chen, Y. & Brent, M. R., 2008, AAAI-08/IAAI-08 Proceedings - 23rd AAAI Conference on Artificial Intelligence and the 20th Innovative Applications of Artificial Intelligence Conference. p. 1018-1023 6 p. (Proceedings of the National Conference on Artificial Intelligence; vol. 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • Current role of PET in oncology: Potentials and challenges in the management of non-small cell lung cancer

    Yalavarthy, P. K., Low, D., Noel, C., Wei, Z., Yang, D., Apte, A., Bradley, J., Deasy, J. & El Naqa, I., 2008, 2008 42nd Asilomar Conference on Signals, Systems and Computers, ASILOMAR 2008. p. 1067-1071 5 p. 5074576. (Conference Record - Asilomar Conference on Signals, Systems and Computers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Diffuse optical monitoring of cerebral oxygen metabolism at the bed-side in cerebrovascular disorders

    Durduran, T., Kim, M. N., Buckey, E. M., Zhou, C., Yu, G., Choe, R., Greenberg, J. H., Detre, J. A. & Yodh, A. G., 2008, Frontiers in Optics, FiO 2008. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Direct 4d reconstruction of parametric images incorporating anato-functional joint entropy

    Tang, J., Kuwabara, H., Wong, D. F. & Rahmim, A., 2008, 2008 IEEE Nuclear Science Symposium Conference Record, NSS/MIC 2008. p. 5471-5474 4 p. 4774491. (IEEE Nuclear Science Symposium Conference Record).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    9 Scopus citations

  • Discussion

    Heath, A., Battaglia, M., Kleeberger, S. R., Kotb, M., Martinez, F. D., Braithwaite, A., Rutter, M. & Poulton, R., 2008, Genetic Effects on Environmental Vulnerability to Disease. p. 41-47 7 p. (Novartis Foundation Symposium; vol. 293).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Discussion

    Stankovich, J., Snieder, H., Martin, N. G., Heath, A., Battaglia, M., Kleeberger, S. R., Uher, R. & Rutter, M., 2008, Genetic Effects on Environmental Vulnerability to Disease. p. 83-86 4 p. (Novartis Foundation Symposium; vol. 293).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Discussion

    Heath, A., Uher, R., Rutter, M., Dodge, K. A. & Poulton, R., 2008, Genetic Effects on Environmental Vulnerability to Disease. p. 26-30 5 p. (Novartis Foundation Symposium; vol. 293).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Discussion

    Heath, A., Poulton, R., Martin, N. G., Rutter, M., Martinez, F. D., Kleeberger, S. R. & Dodge, K. A., 2008, Genetic Effects on Environmental Vulnerability to Disease. p. 138-142 5 p. (Novartis Foundation Symposium; vol. 293).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Discussion

    Uher, R., Martin, N. G., Heath, A., Poulton, R., Rutter, M. & Martinez, F. D., 2008, Genetic Effects on Environmental Vulnerability to Disease. p. 59-67 9 p. (Novartis Foundation Symposium; vol. 293).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Effect of compressibility in modeling of a Zero-Net-Mass-Flux actuator - An experimental and computational study

    Pinzón, C. F., Agarwal, R. K. & Wright, P., 2008, 4th AIAA Flow Control Conference. American Institute of Aeronautics and Astronautics Inc., 2008-3764. (4th AIAA Flow Control Conference).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Effect of shockwaves on the biomechanical and biochemical function of cells

    Barthel, J., Konkar, S., Sankin, G., Darling, E., Guilak, F., Zhong, P., LaMattina, B. & Zauscher, S., Dec 1 2008, Society for Experimental Mechanics - 11th International Congress and Exhibition on Experimental and Applied Mechanics 2008. p. 1315-1319 5 p. (Society for Experimental Mechanics - 11th International Congress and Exhibition on Experimental and Applied Mechanics 2008; vol. 3).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Estimating moving targets behind reinforced walls using radar

    Nikolic, M., Nehorai, A. & Djordjevic, A., 2008, 2008 IEEE International Symposium on Antennas and Propagation and USNC/URSI National Radio Science Meeting, APSURSI. 4619257. (2008 IEEE International Symposium on Antennas and Propagation and USNC/URSI National Radio Science Meeting, APSURSI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Evaporation-enhanced, dynamically-adaptive air (GAS)-cooled heat sink for thermal management of high heat dissipation devices

    Fedorov, A. G. & Meacham, J. M., 2008, 2008 11th IEEE Intersociety Conference on Thermal and Thermomechanical Phenomena in Electronic Systems, I-THERM. p. 333-340 8 p. 4544288. (2008 11th IEEE Intersociety Conference on Thermal and Thermomechanical Phenomena in Electronic Systems, I-THERM).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Experimental validation of a Monte Carlo-based kV x-ray projection model for the Varian linac-mounted Cone-Beam CT imaging system

    Lazos, D., Pokhrel, D., Zhong, S., Jun, L. & Williamson, J. F., 2008, Medical Imaging 2008 - Physics of Medical Imaging. 69133Q. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • Extending the image resolution of animal pet via accessory insert devices

    Tai, Y. C., Wu, H., Pal, D. & O'Sullivan, J. A., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 1413-1416 4 p. 4541271. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Fast planning by search in domain transition graph

    Chen, Y., Huang, R. & Zhang, W., 2008, AAAI-08/IAAI-08 Proceedings - 23rd AAAI Conference on Artificial Intelligence and the 20th Innovative Applications of Artificial Intelligence Conference. p. 886-891 6 p. (Proceedings of the National Conference on Artificial Intelligence; vol. 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    8 Scopus citations

  • Fluorescence emission control by nanometal particle

    Wang, J., Achilefu, S. & Kang, K. A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Fluorescent lifetime of near infrared dyes for structural analysis of serum albumin

    Berezin, M. Y., Lee, H., Akers, W., Nikiforovich, G. & Achilefu, S., 2008, Molecular Probes for Biomedical Applications II. 68670J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6867).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    8 Scopus citations

  • Forward error correcting biosensors: Modeling, algorithms and fabrication

    Liu, Y., Alocilja, E. & Chakrabartty, S., 2008, 2008 IEEE-BIOCAS Biomedical Circuits and Systems Conference, BIOCAS 2008. p. 249-252 4 p. 4696921. (2008 IEEE-BIOCAS Biomedical Circuits and Systems Conference, BIOCAS 2008).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Further development in anatomically constrained MR image reconstruction: Application to multimodal imaging of mouse stroke

    Haldar, J. P., Wu, T. H., Wang, Q., Chen, C. I., Song, S. K. & Liang, Z. P., 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. IEEE Computer Society, p. 422-425 4 p. 4649180. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Gathering the gold dust: Methods for assessing the aggregate impact of small effect genes in genomic scans

    Province, M. A. & Borecki, I. B., 2008, Pacific Symposium on Biocomputing 2008, PSB 2008. p. 190-200 11 p. (Pacific Symposium on Biocomputing 2008, PSB 2008).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    15 Scopus citations

  • General discussion I

    Tesson, F., Martin, N. G., Kotb, M., Uher, R., Poulton, R., Snieder, H., Heath, A., Martinez, F. D. & Rutter, M., 2008, Genetic Effects on Environmental Vulnerability to Disease. p. 68-70 3 p. (Novartis Foundation Symposium; vol. 293).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Inactivation of viruses with a femtosecond laser via impulsive stimulated Raman scattering

    Tsen, K. T., Tsen, S. W. D., Chang, C. L., Hung, C. F., Wu, T. C., Ramakrishna, B., Mossman, K. & Kiang, J. G., 2008, Optical Interactions with Tissue and Cells XIX. 68540N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6854).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    10 Scopus citations

  • Inherently directional lasing from a thermal-induced-deformation high-Q microcavity

    Xiao, Y. F., Dong, C. H., Zou, C. L., Han, Z. F., Yang, L. & Guo, G. C., 2008, 2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS. 4551755. (2008 Conference on Quantum Electronics and Laser Science Conference on Lasers and Electro-Optics, CLEO/QELS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Inherently directional lasing from a thermal-induced-deformation high-Q microcavity

    Xiao, Y. F., Dong, C. H., Zou, C. L., Han, Z. F., Yang, L. & Guo, G. C., 2008, Conference on Lasers and Electro-Optics, CLEO 2008. Optical Society of America, (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Inherently directional lasing from a thermal-induced-deformation high-Q microcavity

    Xiao, Y. F., Dong, C. H., Zou, C. L., Han, Z. F., Yang, L. & Guo, G. C., 2008, Proceedings of 2008 10th Anniversary International Conference on Transparent Optical Networks, ICTON. p. 14-15 2 p. 4598716. (Proceedings of 2008 10th Anniversary International Conference on Transparent Optical Networks, ICTON; vol. 4).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Interactive separation of segmented bones in CT volumes using graph cut

    Liu, L., Raber, D., Nopachai, D., Commean, P., Sinacore, D., Prior, F., Pless, R. & Ju, T., 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008 - 11th International Conference, Proceedings. PART 1 ed. p. 296-304 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5241 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    47 Scopus citations

  • Level crossing in toroidal on-chip microcavities

    Schwefel, H. G. L., Yang, L., Oxborrow, M., Douglas Stone, A., Vahala, K. J. & Carmon, T., 2008, Laser Science, LS 2008. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access

  • Low-threshold voltage multipliers based on floating-gate charge-pumps

    Huang, C. & Chakrabartty, S., 2008, 2008 IEEE-BIOCAS Biomedical Circuits and Systems Conference, BIOCAS 2008. p. 205-208 4 p. 4696910. (2008 IEEE-BIOCAS Biomedical Circuits and Systems Conference, BIOCAS 2008).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Managing biological data using bdbms

    Eltabakh, M. Y., Ouzzani, M., Aref, W. G., Elmagarmid, A. K., Laura-Silva, Y., Arshad, M. U., Salt, D. & Baxter, I., 2008, Proceedings of the 2008 IEEE 24th International Conference on Data Engineering, ICDE'08. p. 1600-1603 4 p. 4497631. (Proceedings - International Conference on Data Engineering).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    18 Scopus citations

  • MIMO radar detection of targets in compound-gaussian clutter

    Akcakaya, M., Hurtado, M. & Nehorai, A., 2008, 2008 42nd Asilomar Conference on Signals, Systems and Computers, ASILOMAR 2008. p. 208-212 5 p. 5074393. (Conference Record - Asilomar Conference on Signals, Systems and Computers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    20 Scopus citations