Washington University School of Medicine

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  • 2011

    Improving the quantitative ability of contrast enhanced ultrasound perfusion imaging: Effect of contrast administration rate and imaging plane orientation

    Johnson, K., Kogan, P., Feingold, S., Garrett, N., Guracar, I., Arendshorst, W. & Dayton, P. A., 2011, 2011 IEEE International Ultrasonics Symposium, IUS 2011. p. 2436-2439 4 p. 6293558. (IEEE International Ultrasonics Symposium, IUS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Inactivation of encephalomyocarditis virus and salmonella typhimurium by using a visible femtosecond laser

    Tsen, S. W. D. & Tsen, K. T., 2011, Optical Biopsy IX. 78950S. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7895).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Incorporation of a cascade gamma ray correction into the SRW iterative reconstruction for non-standard PET nuclides: Towards a unified correction weighted (UCW) scheme in the sensitivity image

    Cheng, J. C. & Laforest, R., 2011, 2011 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2011. Institute of Electrical and Electronics Engineers Inc., p. 4059-4062 4 p. 6153771. (IEEE Nuclear Science Symposium Conference Record).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Increasing energy efficiency of HVAC systems of buildings using phase change material

    Chusak, L., Daiber, J. & Agarwal, R., 2011, ASME 2011 5th International Conference on Energy Sustainability, ES 2011. PARTS A, B, AND C ed. p. 47-55 9 p. (ASME 2011 5th International Conference on Energy Sustainability, ES 2011; no. PARTS A, B, AND C).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Integrating network motifs into a genetic network: A case of study based on the Phop/PhoQ two-component system

    Harari, O., Del Val, C. & Zwir, I., 2011, Proceedings of the 2011 11th International Conference on Intelligent Systems Design and Applications, ISDA'11. p. 1371-1376 6 p. 6121851. (International Conference on Intelligent Systems Design and Applications, ISDA).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Interactions of sub-wavelength light scatterers with a whispering-gallery-mode optical microresonator

    Zhu, J., Ozdemir, S. K., He, L. & Yang, L., 2011, CLEO: Science and Innovations, CLEO_SI 2011. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Interactions of sub-wavelength light scatterers with a whispering-gallery- mode optical microresonator

    Zhu, J., Ozdemir, S. K., He, L. & Yang, L., 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950511. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Interface design challenge for brain-computer interaction

    Hill, J., Brunner, P. & Vaughan, T., 2011, Foundations of Augmented Cognition: Directing the Future of Adaptive Systems - 6th International Conference, FAC 2011, Held as Part of HCI International 2011, Proceedings. p. 500-506 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6780 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    2 Scopus citations
  • Investigation of breast cancer detectability using PET insert with whole-body and zoom-in imaging capability

    Mathews, A. J., Komarov, S., Kume, M., Wu, H., O'Sullivan, J. A. & Tai, Y. C., 2011, 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11. p. 1784-1787 4 p. 5872752. (Proceedings - International Symposium on Biomedical Imaging).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Invited: Advances toward practical detection of trace chemical hazards with solid state microarray devices

    Raman, B., Meier, D., Shenoy, R., Benkstein, K. & Semancik, S., 2011, Olfaction and Electronic Nose: Proceedings of the 14th International Symposium on Olfaction and Electronic Nose, ISOEN 2011. p. 115-118 4 p. (AIP Conference Proceedings; vol. 1362).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • In vivo multi-scale photoacoustic microscopy of human skin

    Favazza, C. P., Hu, S., Huang, V., Jassim, O., Cornelius, L. A. & Wang, L. V., Feb 10 2011, Photons Plus Ultrasound: Imaging and Sensing 2011. SPIE, 789946. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7899).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    9 Scopus citations
  • Isolation of circulating tumor cells using photoacoustic flowmetry and two phase flow

    O'Brien, C. M., Rood, K. D., Gupta, S. K., Mosley, J. D., Goldschmidt, B. S., Sharma, N., Sengupta, S. & Viator, J. A., 2011, Photons Plus Ultrasound: Imaging and Sensing 2011. 78993F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7899).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Is the reduction of dimensionality to a small number of features always necessary in constructing predictive models for analysis of complex diseases or behaviours?

    Zollanvari, A., Saccone, N. L., Bierut, L. J., Ramoni, M. F. & Alterovitz, G., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 3573-3576 4 p. 6090596. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    2 Scopus citations
  • Kinematics and kinetics of flagellar locomotion in chlamydomonas reinhardtii

    Bayly, P. V., Lewis, B. L., Ranz, E. C., Okamoto, R. J., Pless, R. B. & Dutcher, S. K., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 1249-1250 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Landmark/image-based deformable registration of gene expression data

    Kurkure, U., Le, Y. H., Paragios, N., Carson, J. P., Ju, T. & Kakadiaris, I. A., 2011, 2011 IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2011. IEEE Computer Society, p. 1089-1096 8 p. 5995708. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    14 Scopus citations
  • Lattice Boltzmann simulations of slip flow of non-Newtonian fluids in microchannels

    Agarwal, R. K. & Chusak, L., 2011, Parallel Computational Fluid Dynamics 2008 - Parallel Numerical Methods, Software Development and Applications. p. 247-256 10 p. (Lecture Notes in Computational Science and Engineering; vol. 74 LNCSE).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Lensless fluorescent on-chip microscopy using a fiber-optic taper

    Coskun, A. F., Sencan, I., Su, T. W. & Ozcan, A., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 5981-5984 4 p. 6091478. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Lensless on-chip color imaging using nano-structured surfaces and compressive decoding

    Khademhosseinieh, B., Biener, G., Sencan, I. & Ozcan, A., 2011, CLEO: Science and Innovations, CLEO_SI 2011. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Lensless on-chip color imaging using nano-structured surfaces and compressive decoding

    Khademhosseinieh, B., Biener, G., Sencan, I. & Ozcan, A., 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. IEEE Computer Society, 5950642. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    1 Scopus citations
  • Lossless 3-D reconstruction and registration of semi-quantitative gene expression data in the mouse brain

    Enlow, M. A., Ju, T., Kakadiaris, I. A. & Carson, J. P., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 8086-8089 4 p. 6091994. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    2 Scopus citations
  • Markov random field-based fitting of a subdivision-based geometric atlas

    Kurkure, U., Le, Y. H., Paragios, N., Ju, T., Carson, J. P. & Kakadiaris, I. A., 2011, 2011 International Conference on Computer Vision, ICCV 2011. p. 2540-2547 8 p. 6126541. (Proceedings of the IEEE International Conference on Computer Vision).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    7 Scopus citations
  • Measurement of gas electron multiplier (GEM) detector characteristics

    Parka, S., Baldelomar, E., Park, K., Sosebee, M., White, A. & Yu, J., 2011, Application of Accelerators in Research and Industry - Twenty-First International Conference, CAARI 2010. p. 193-196 4 p. (AIP Conference Proceedings; vol. 1336).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Mechanics and modeling of postnatal arterial development in wild-type and elastin-insufficient mice

    Cheng, J. K., Le, V., Mecham, R. P. & Wagenseil, J. E., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 1-2 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Medical data mining for early deterioration warning in general hospital wards

    Mao, Y., Chen, Y., Hackmann, G., Chen, M., Lu, C., Kollef, M. & Bailey, T. C., 2011, Proceedings - 11th IEEE International Conference on Data Mining Workshops, ICDMW 2011. p. 1042-1049 8 p. 6137495. (Proceedings - IEEE International Conference on Data Mining, ICDM).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    31 Scopus citations
  • Microreactor-based system for radiolabeling of biomolecules with metallic radioisotopes

    Desai, A. V., Zeng, D., Wheeler, T. D., Ranganathan, D., Reichert, D. E. & Kenis, P. J. A., Dec 1 2011, 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011, MicroTAS 2011. p. 1576-1578 3 p. (15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011, MicroTAS 2011; vol. 3).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • MIMO radar sensitivity analysis for target detection

    Akçakaya, M. & Nehorai, A., 2011, RadarCon'11 - In the Eye of the Storm: 2011 IEEE Radar Conference. p. 633-638 6 p. 5960614. (IEEE National Radar Conference - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    5 Scopus citations
  • Mode splitting in whispering-gallery-mode microresonators in aquatic environment

    Kim, W., Ozdemir, S. K., Zhu, J., He, L. & Yang, L., 2011, Bio-Optics: Design and Application, BODA 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Multiple Rao-Blackwellized particle filtering for target tracking in urban environments

    Chavali, P. & Nehorai, A., 2011, 2011 4th IEEE International Workshop on Computational Advances in Multi-Sensor Adaptive Processing, CAMSAP 2011. p. 409-412 4 p. 6136039. (2011 4th IEEE International Workshop on Computational Advances in Multi-Sensor Adaptive Processing, CAMSAP 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    2 Scopus citations
  • Multiscale approach for weighted least-squares optical flow for estimating arterial wall displacements

    Gastounioti, A., Golemati, S., Tsiaparas, N. N., Stoitsis, J. S. & Nikita, K. S., 2011, 10th International Workshop on Biomedical Engineering, BioEng 2011. 6079061. (10th International Workshop on Biomedical Engineering, BioEng 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Near infrared scanning imaging of cancerous and normal prostate tissues enhanced by a receptor-targeted contrast agent (Cytate) and independent component analysis

    Pu, Y., Wang, W. B., Achilefu, S., Xu, M. & Alfano, R. R., 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950034. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Novel design of multimodal MRI/NIR optical contrast agent

    Guo, K., Lin, F., Akers, W., Zheng, J., Teng, B., Vasalatiy, O., Griffiths, G. L., Gandjbakhche, A., Berezin, M. Y. & Achilefu, S., 2011, Reporters, Markers, Dyes, Nanoparticles, and Molecular Probes for Biomedical Applications III. 791015. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7910).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Numerical study of pulsatile flow through models of vascular stenoses with physiological waveform of the heart

    Thompson, J. D., Pinzn, C. F. & Agarwal, R. K., 2011, Parallel Computational Fluid Dynamics 2008 - Parallel Numerical Methods, Software Development and Applications. p. 357-368 12 p. (Lecture Notes in Computational Science and Engineering; vol. 74 LNCSE).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Odor recognition VS. classification in artificial olfaction

    Raman, B., Hertz, J., Benkstein, K. & Semancik, S., 2011, Olfaction and Electronic Nose: Proceedings of the 14th International Symposium on Olfaction and Electronic Nose, ISOEN 2011. p. 69-72 4 p. (AIP Conference Proceedings; vol. 1362).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • On-chip optical resonators for single nanoparticle detection and measurement

    Zhu, J., Ozdemir, S. K., He, L., Kim, W., Chen, D. R. & Yang, L., 2011, Bio-Optics: Design and Application, BODA 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • On the mechanics of partially mineralized tissues and their implications for the attachment of tendon to bone

    Liu, Y., Birman, V., Chen, C., Thomopoulos, S. & Genin, G. M., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 55-56 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Optical-resolution photoacoustic microscopy of ischemic stroke

    Hu, S., Gonzales, E., Soetikno, B., Gong, E., Yan, P., Maslov, K., Lee, J. M. & Wang, L. V., Feb 10 2011, Photons Plus Ultrasound: Imaging and Sensing 2011. SPIE, 789906. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7899).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    27 Scopus citations
  • Optimal asymptotic entrainment of phase-reduced oscillators

    Zlotnik, A. & Li, J. S., 2011, ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011. p. 479-484 6 p. (ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    11 Scopus citations
  • Optimal placement of horizontal - and vertical-axis wind turbines in a wind farm for maximum power generation using a genetic algorithm

    Chen, X. & Agarwal, R., 2011, ASME 2011 5th International Conference on Energy Sustainability, ES 2011. PARTS A, B, AND C ed. p. 2033-2039 7 p. (ASME 2011 5th International Conference on Energy Sustainability, ES 2011; no. PARTS A, B, AND C).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Optimal sensing matrix for sparse linear models

    Pazos, S., Hurtado, M., Muravchik, C. & Nehorai, A., 2011, 2011 4th IEEE International Workshop on Computational Advances in Multi-Sensor Adaptive Processing, CAMSAP 2011. p. 257-260 4 p. 6135997. (2011 4th IEEE International Workshop on Computational Advances in Multi-Sensor Adaptive Processing, CAMSAP 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Performance analysis of biologically inspired coupled circular antenna array

    Akcakaya, M., Muravchik, C. H. & Nehorai, A., 2011, 2011 IEEE International Symposium on Antennas and Propagation - Proceedings. p. 1530-1533 4 p. 5996588. (IEEE Antennas and Propagation Society, AP-S International Symposium (Digest)).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Photoacoustic image-guided needle biopsy of sentinel lymph nodes

    Kim, C., Erpelding, T. N., Akers, W. J., Maslov, K., Song, L., Jankovic, L., Margenthaler, J. A., Achilefu, S. & Wang, L. V., 2011, Photons Plus Ultrasound: Imaging and Sensing 2011. 78990K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7899).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Photonic nanojet-induced modes: From physics to applications

    Allen, K. W., Darafsheh, A. & Astratov, V. N., 2011, 2011 13th International Conference on Transparent Optical Networks, ICTON 2011. 5970965. (International Conference on Transparent Optical Networks).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    10 Scopus citations
  • Piezoelectric transducer based miniature catheter for ultrahigh speed endoscopic optical coherence tomography

    Tsai, T. H., Potsaid, B. M., Kraus, M., Liu, J. J., Zhou, C., Hornegger, J. & Fujimoto, J. G., 2011, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XV. 788919. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7889).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    2 Scopus citations
  • Pilot-Protein: A high-throughput method for in silico discovery of peptides, proteins, and post-translational modifications

    Baliban, R., DiMaggio, P. A., Li, Z., Plazas-Mayorca, M., Garcia, B. A. & Floudas, C. A., 2011, 2011 Annual Meeting of the American Electrophoresis Society, AES 2011 - Topical Conference at the 2011 AIChE Annual Meeting. AIChE, p. 124-125 2 p. (2011 Annual Meeting of the American Electrophoresis Society, AES 2011 - Topical Conference at the 2011 AIChE Annual Meeting).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Planar biaxial characterization of human coronary and carotid arteries for computational modeling

    Kural, M. H., Tang, D., Zheng, J. & Billiar, K. L., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 763-764 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Plasmonic nano-apertures for lensfree on-chip sensing

    Khademhosseinieh, B., Biener, G., Sencan, I., Su, T. W., Coskun, A. F. & Ozcan, A., 2011, CLEO: Science and Innovations, CLEO_SI 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  • Polarimetric MIMO radar target detection using game theory

    Gogineni, S. & Nehorai, A., 2011, 2011 4th IEEE International Workshop on Computational Advances in Multi-Sensor Adaptive Processing, CAMSAP 2011. p. 17-20 4 p. 6135975. (2011 4th IEEE International Workshop on Computational Advances in Multi-Sensor Adaptive Processing, CAMSAP 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Power generation from wind turbines in a solar chimney

    Foote, T. & Agarwal, R., 2011, ASME 2011 5th International Conference on Energy Sustainability, ES 2011. PARTS A, B, AND C ed. p. 2041-2049 9 p. (ASME 2011 5th International Conference on Energy Sustainability, ES 2011; no. PARTS A, B, AND C).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    3 Scopus citations
  • Quantitative, high-resolution photoacoustic spectroscopy by combining photoacoustic imaging with diffuse optical tomography

    Bauer, A. Q., Nothdurft, R. E., Erpelding, T. N., Wang, L. V. & Culver, J. P., Feb 28 2011, Photons Plus Ultrasound: Imaging and Sensing 2011. SPIE, 78993O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7899).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    Open Access
    3 Scopus citations
  • Quantitative evaluation of systematic imaging error due to uncertainty in tissue optical properties in high-density diffuse optical tomography

    Zhan, Y., Eggebrecht, A., Dehghani, H. & Culver, J., 2011, Optical Tomography and Spectroscopy of Tissue IX. 78960O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7896).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

    2 Scopus citations