Washington University School of Medicine

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  • 2011

    Computations of Hypersonic Flow of a diatomic gas in rotational non-equilibrium past 3D blunt bodies using the generalized Boltzmann equation

    Wilson, C. D., Agarwal, R. K. & Tcheremissine, F. G., 2011, 27th International Symposium on Rarefied Gas Dynamics - 2010, RGD27. PART 1 ed. p. 1004-1009 6 p. (AIP Conference Proceedings; vol. 1333, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Constrained minimum-power control of spiking neuron oscillators

    Dasanayake, I. & Li, J. S., 2011, 2011 50th IEEE Conference on Decision and Control and European Control Conference, CDC-ECC 2011. Institute of Electrical and Electronics Engineers Inc., p. 3694-3699 6 p. 6160963. (Proceedings of the IEEE Conference on Decision and Control).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    9 Scopus citations

  • Control in computing systems: Part i

    Luna, J. M. & Abdallah, C. T., 2011, 2011 IEEE International Symposium on Computer-Aided Control System Design, CACSD 2011. p. 25-31 7 p. 6044541. (Proceedings of the IEEE International Symposium on Computer-Aided Control System Design).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    12 Scopus citations

  • Control in computing systems: Part II

    Luna, J. M. & Abdallah, C. T., 2011, 2011 IEEE International Symposium on Computer-Aided Control System Design, CACSD 2011. p. 32-36 5 p. 6044537. (Proceedings of the IEEE International Symposium on Computer-Aided Control System Design).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • Convergence of a pseudospectral method for optimal control of complex dynamical systems

    Ruths, J., Zlotnik, A. & Li, S., 2011, 2011 50th IEEE Conference on Decision and Control and European Control Conference, CDC-ECC 2011. Institute of Electrical and Electronics Engineers Inc., p. 5553-5558 6 p. 6160761. (Proceedings of the IEEE Conference on Decision and Control).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    21 Scopus citations

  • Coordinated user scheduling with transmit beamforming in the presence of inter-femtocell interference

    Lee, H. C., Oh, D. C. & Lee, Y. H., 2011, 2011 IEEE International Conference on Communications, ICC 2011. 5963055. (IEEE International Conference on Communications).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    15 Scopus citations

  • Copernicus: A new paradigm for parallel adaptive molecular dynamics

    Pronk, S., Larsson, P., Pouya, I., Bowman, G. R., Haque, I. S., Beauchamp, K., Hess, B., Pande, V. S., Kasson, P. M. & Lindahl, E., 2011, Proceedings of 2011 SC - International Conference for High Performance Computing, Networking, Storage and Analysis. 60. (Proceedings of 2011 SC - International Conference for High Performance Computing, Networking, Storage and Analysis).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    38 Scopus citations

  • Coupling oriented hidden Markov random field model with local clustering for segmenting blood vessels and measuring spatial structures in images of tumor microenvironment

    Zhu, Y., Li, F., Cridebring, D., Ma, J., Wong, S. T. C., Vadakkan, T. J., Zhang, M., Landua, J., Wei, W., Dickinson, M. E., Rosen, J. M. & Lewis, M. T., 2011, Proceedings - 2011 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011. p. 352-357 6 p. 6120465. (Proceedings - 2011 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • Decoding semantic information from human electrocorticographic (ECoG) signals

    Wang, W., Degenhart, A. D., Sudre, G. P., Pomerleau, D. A. & Tyler-Kabara, E. C., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 6294-6298 5 p. 6091553. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    40 Scopus citations

  • Detecting and measuring single viruses and nanoparticles with an optical microresonator

    Zhu, J., Ozdemir, S. K., He, L., Chen, D. R. & Yang, L., 2011, CLEO: Science and Innovations, CLEO_SI 2011. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Detecting and measuring single viruses and nanoparticles with an optical microresonator

    Zhu, J., Ozdemir, S. K., He, L., Chen, D. R. & Yang, L., 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. IEEE Computer Society, 5950764. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Detection of single nanoparticles using a nano fiber-taper

    Zhu, J., Ozdemir, S. K., He, L., Chen, D. R. & Yang, L., 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5950482. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Detection of single nanoparticles using a nano fiber-taper

    Zhu, J., Ozdemir, S. K., He, L., Chen, D. R. & Yang, L., 2011, CLEO: Science and Innovations, CLEO_SI 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Development of low coherence light sheet illumination microscope for fluorescence-free bioimaging

    Xu, Z. & Holy, T. E., 2011, Novel Optical Systems Design and Optimization XIV. 812908. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8129).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Diagnosing lung cancer using coherent anti-Stokes Raman scattering microscopy

    Gao, L., Yang, Y., Xing, J., Thrall, M. J., Wang, Z., Li, F., Luo, P., Wong, K. K., Zhao, H. & Wong, S. T. C., 2011, Advanced Biomedical and Clinical Diagnostic Systems IX. 789015. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7890).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Differential diagnosis of human lung cancer A label-free and chemistry-sensitive approach

    Gao, L., Yang, Y., Xing, J., Thrall, M. J., Wang, Z., Li, F., Luo, P., Wong, K. K. & Wong, S. T. C., 2011, Proceedings of the 2011 IEEE/NIH Life Science Systems and Applications Workshop, LiSSA 2011. p. 14-17 4 p. 5754143. (Proceedings of the 2011 IEEE/NIH Life Science Systems and Applications Workshop, LiSSA 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Direct estimation of purcell factor from scatterer-induced mode splitting spectra of an optical microcavity

    Ozdemir, S. K., Zhu, J., He, L. & Yang, L., 2011, CLEO: Science and Innovations, CLEO_SI 2011. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Direct estimation of purcell factor from scatterer-induced mode splitting spectra of an optical microcavity

    Ozdemir, S. K., Zhu, J., He, L. & Yang, L., 2011, Quantum Electronics and Laser Science Conference, QELS 2011. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Direct estimation of purcell factor from scatterer-induced mode splitting spectra of an optical microcavity

    Ozdemir, S. K., Zhu, J., He, L. & Yang, L., 2011, CLEO: Applications and Technology, CLEO_AT 2011. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Direct estimation of Purcell factor from scatterer-induced mode splitting spectra of an optical microcavity

    Ozdemir, S. K., Zhu, J., He, L. & Yang, L., 2011, 2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011. 5951043. (2011 Conference on Lasers and Electro-Optics: Laser Science to Photonic Applications, CLEO 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Does reduced radiation dose adversely affect the ability to detect abnormal myocardial perfusion on computed tomography during vasodilator stress?

    Patel, A. R., Chandra, S., Kachenoura, N., Lodato, J. A., Ahmad, H., Freed, B. H., Newby, B., Lang, R. M. & Mor-Avi, V., 2011, Computing in Cardiology 2011, CinC 2011. p. 121-124 4 p. 6164517. (Computing in Cardiology; vol. 38).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Dynamic multi-bed FDG PET imaging: Feasibility and optimization

    Karakatsanis, N. A., Lodge, M. A., Zhou, Y., Mhlanga, J., Chaudhry, M. A., Tahari, A. K., Segars, W. P., Wahl, R. L. & Rahmim, A., 2011, 2011 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2011. Institute of Electrical and Electronics Engineers Inc., p. 3863-3870 8 p. 6153735. (IEEE Nuclear Science Symposium Conference Record).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    33 Scopus citations

  • Dynamics of stretch-induced stress fiber remodeling in 3D cell culture

    Lee, S. L., Nekouzadeh, A., Pryse, K. M., Elson, E. L. & Genin, G. M., Dec 1 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 471-472 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Effect of contrast magnitude and resolution metric on noise-resolution tradeoffs in x-ray CT imaging: A comparison of non-quadratic penalized alternating minimization and filtered backprojection algorithms

    Evans, J. D., Politte, D. G., Whiting, B. R., O'Sullivan, J. A. & Williamson, J. F., 2011, Medical Imaging 2011: Physics of Medical Imaging. 79612C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7961).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Effect of deep breathing on extracted oxygen and cerebral hemoglobin levels

    Kennedy, P. M., Zarbock, C. M., Burke, B. A. & Diamond, S. G., Dec 26 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 1021-1024 4 p. 6090237. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Effect of ST2, a fragment of ADAMTS13, on cleavage of von willebrand factor

    Shao, J. Y., Ling, Y., Sadler, J. E. & Majerus, E. M., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 351-352 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Efficient parallel message computation for MAP inference

    Alchatzidis, S., Sotiras, A. & Paragios, N., 2011, 2011 International Conference on Computer Vision, ICCV 2011. p. 1379-1386 8 p. 6126392. (Proceedings of the IEEE International Conference on Computer Vision).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Elastic stress singularities: Implications for the attachment of tendon to bone

    Liu, Y., Birman, V., Chen, C., Thomopoulos, S. & Genin, G. M., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 1019-1020 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Endothelial cell culture model of carotid artery atherosclerosis

    Estrada, R., Giridharan, G., Prabhu, S. D. & Sethu, P., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 186-189 4 p. 6089925. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    10 Scopus citations

  • Evaluation of the HD and HD+TOF reconstructions for Siemens' Biograph-mCT TOF PET scanner

    Cheng, J. C. & Laforest, R., 2011, 2011 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2011. Institute of Electrical and Electronics Engineers Inc., p. 4131-4134 4 p. 6153787. (IEEE Nuclear Science Symposium Conference Record).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Evaluation of various types of wall boundary conditions for the Boltzmann equation

    Wilson, C. D., Agarwal, R. K. & Tcheremissine, F. G., 2011, 27th International Symposium on Rarefied Gas Dynamics - 2010, RGD27. PART 1 ed. p. 146-151 6 p. (AIP Conference Proceedings; vol. 1333, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Evaluation of various types of wall boundary conditions for the Boltzmann equation

    Wilson, C. D., Agarwal, R. K. & Tcheremissine, F. G., 2011, 42nd AIAA Thermophysics Conference. (42nd AIAA Thermophysics Conference).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Extending QuickSilver™ electronics for PET insert integration

    Hu, D., Siegel, S. B., Wu, H., Wen, J., Ravindranath, B. & Tai, Y. C., 2011, 2011 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2011. Institute of Electrical and Electronics Engineers Inc., p. 3247-3249 3 p. 6152582. (IEEE Nuclear Science Symposium Conference Record).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Feasibility of echocardiographic-based assessment of myocardial fiber structure in individual hearts

    Milne, M. L., Singh, G. K., Miller, J. G. & Holland, M. R., Dec 1 2011, 2011 IEEE International Ultrasonics Symposium, IUS 2011. p. 2009-2012 4 p. 6293252. (IEEE International Ultrasonics Symposium, IUS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Finding promoter profiles with multiobjective identification of cis-regulatory modules based on constraints

    Romero-Zaliz, R., Arnedo-Fdez, J., Zwir, I. & Del Val, C., 2011, Proceedings of the 2011 11th International Conference on Intelligent Systems Design and Applications, ISDA'11. p. 1224-1228 5 p. 6121826. (International Conference on Intelligent Systems Design and Applications, ISDA).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Finite element predictions of labrum and cartilage mechanics in dysplastic human hips

    Henak, C. R., Davis, R. S., Ellis, B. J., Harris, M. D., Anderson, A. E., Peters, C. L. & Weiss, J. A., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 491-492 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Flexural rigidity of intact chlamydomonas flagella measured with an optical trap

    Okamoto, R. J., Ying, J., Lewis, B. L., Ranz, E. C., Shao, J. Y., Dutcher, S. K. & Bayly, P. V., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 407-408 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Fluorescence lifetime contrast in optical molecular imaging

    Akers, W. J., Berezin, M., Lee, H. & Achilefu, S., Jan 1 2011, Optical Molecular Probes, Imaging and Drug Delivery, OMP 2011. Optical Society of American (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Focusing capability of integrated chains of microspheres in the limit of geometrical optics

    Darafsheh, A., Allen, K. W., Fardad, A., Fried, N. M., Antoszyk, A. N., Ying, H. S. & Astratov, V. N., 2011, Laser Resonators and Beam Control XIII. 79131A. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7913).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    8 Scopus citations

  • Frequency tracking and variable bandwidth for line noise filtering without a reference

    Kelly, J. W., Collinger, J. L., Degenhart, A. D., Siewiorek, D. P., Smailagic, A. & Wang, W., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 7908-7911 4 p. 6091950. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Generalized inter-frame and intra-frame motion correction in PET imaging - A simulation study

    Mohy-Ud-Din, H., Karakatsanis, N. A., Ay, M. R., Endres, C. J., Wong, D. F. & Rahmim, A., 2011, 2011 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2011. Institute of Electrical and Electronics Engineers Inc., p. 3858-3862 5 p. 6153734. (IEEE Nuclear Science Symposium Conference Record).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Genetic algorithm for induction of finite automata with continuous and discrete output actions

    Alexandrov, A., Sergushichev, A., Kazakov, S. & Tsarev, F., 2011, Genetic and Evolutionary Computation Conference, GECCO'11 - Companion Publication. p. 775-778 4 p. (Genetic and Evolutionary Computation Conference, GECCO'11 - Companion Publication).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Handheld 2-channel impedimetric cell counting system with embedded real-time processing

    Rottigni, A., Carminati, M., Ferrari, G., Vahey, M. D., Voldman, J. & Sampietro, M., 2011, Bioelectronics, Biomedical, and Bioinspired Systems V; and Nanotechnology V. 80680S. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8068).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Haplotype inference from short sequence reads using a population genealogical history model

    Zhang, J. & Wu, Y., Dec 1 2011, Pacific Symposium on Biocomputing 2011, PSB 2011. p. 288-299 12 p. (Pacific Symposium on Biocomputing 2011, PSB 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Highly specific, NIR fluorescent contrast agent with emission controlled by gold nanoparticle

    Wang, J., O'Toole, M., Massey, A., Biswas, S., Nantz, M., Achilefu, S. & Kang, K. A., 2011, Oxygen Transport to Tissue XXXII. Springer New York LLC, p. 149-154 6 p. (Advances in Experimental Medicine and Biology; vol. 701).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    12 Scopus citations

  • High Q microtoroid and applications

    Yang, L., He, L., Ozdemir, S. K., Zhu, J. & Kim, W., 2011, IEEE Photonic Society 24th Annual Meeting, PHO 2011. p. 312-313 2 p. 6110551. (IEEE Photonic Society 24th Annual Meeting, PHO 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Identifying interacting SNPs with parallel fish-agent based logic regression

    Wang, J., Zhang, J. & Wu, Y., Apr 14 2011, 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2011. p. 171-177 7 p. 5729874. (2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Illumination sensing using sparse modeling

    Gogineni, S. & Nehorai, A., 2011, 2011 Digital Signal Processing and Signal Processing Education Meeting, DSP/SPE 2011 - Proceedings. p. 255-258 4 p. 5739221. (2011 Digital Signal Processing and Signal Processing Education Meeting, DSP/SPE 2011 - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Impact of monochloramine disinfection on the development of groundwater-fed biofilms

    Ling, F. & Liu, W. T., 2011, Water Quality Technology Conference and Exposition 2011. p. 1295 1 p. (Water Quality Technology Conference and Exposition 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Improvement in spatial resolution of dual-ended readout of 100 mm long LYSO Crystals through use of systematic crystal surface roughing

    Ur-Rehman, F., Tai, Y. C. & Goertzen, A. L., 2011, 2011 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2011. Institute of Electrical and Electronics Engineers Inc., p. 3618-3621 4 p. (IEEE Nuclear Science Symposium Conference Record).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations