Institute for Informatics, Data Science and Biostatistics

2022

HiPAL: A Deep Framework for Physician Burnout Prediction Using Activity Logs in Electronic Health Records

Liu, H., Lou, S. S., Warner, B. C., Harford, D. R., Kannampallil, T. & Lu, C., Aug 14 2022, KDD 2022 - Proceedings of the 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining. Association for Computing Machinery, p. 3377-3387 11 p. (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

1 Scopus citations

Perioperative Predictions with Interpretable Latent Representation

Xue, B., Jiao, Y., Kannampallil, T., Fritz, B., King, C., Abraham, J., Avidan, M. & Lu, C., Aug 14 2022, KDD 2022 - Proceedings of the 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining. Association for Computing Machinery, p. 4268-4278 11 p. (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

Predicting Intraoperative Hypoxemia with Hybrid Inference Sequence Autoencoder Networks

Liu, H., Montana, M., Li, D., Renfroe, C., Kannampallil, T. & Lu, C., Oct 17 2022, CIKM 2022 - Proceedings of the 31st ACM International Conference on Information and Knowledge Management. Association for Computing Machinery, p. 1269-1278 10 p. (International Conference on Information and Knowledge Management, Proceedings).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

Self-explaining Hierarchical Model for Intraoperative Time Series

Li, D., Xue, B., King, C., Fritz, B., Avidan, M., Abraham, J. & Lu, C., 2022, Proceedings - 22nd IEEE International Conference on Data Mining, ICDM 2022. Zhu, X., Ranka, S., Thai, M. T., Washio, T. & Wu, X. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1041-1046 6 p. (Proceedings - IEEE International Conference on Data Mining, ICDM; vol. 2022-November).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Self-explaining neural network with concept-based explanations for ICU mortality prediction

Kumar, S., Yu, S. C., Kannampallil, T., Abrams, Z., Michelson, A. & Payne, P. R. O., Aug 7 2022, Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, BCB 2022. Association for Computing Machinery, Inc, 8. (Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, BCB 2022).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

Stakeholder Mapping on the Development of Digital Health Interventions for Self-Management Among Patients with Chronic Obstructive Pulmonary Disease in China

An, Q., Kelley, M. M. & Yen, P. Y., Jun 6 2022, MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation - Proceedings of the 18th World Congress on Medical and Health Informatics. Otero, P., Scott, P., Martin, S. Z. & Huesing, E. (eds.). IOS Press BV, p. 1106-1107 2 p. (Studies in Health Technology and Informatics; vol. 290).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

2021

BrainTumorNet: Multi-task learning for joint segmentation of high-grade glioma and brain metastases from MR images

Chakrabarty, S., Sotiras, A., Milchenko, M., Lamontagne, P., Abraham, C., Robinson, C. & Marcus, D., 2021, Medical Imaging 2021: Image Processing. Isgum, I. & Landman, B. A. (eds.). SPIE, 115960K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11596).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

RespWatch: Robust Measurement of Respiratory Rate on Smartwatches with Photoplethysmography

Dai, R., Lu, C., Avidan, M. & Kannampallil, T., May 18 2021, IoTDI 2021 - Proceedings of the 2021 International Conference on Internet-of-Things Design and Implementation. Association for Computing Machinery, Inc, p. 208-220 13 p. (IoTDI 2021 - Proceedings of the 2021 International Conference on Internet-of-Things Design and Implementation).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

4 Scopus citations

Transformer-based Multi-target Regression on Electronic Health Records for Primordial Prevention of Cardiovascular Disease

Poulain, R., Gupta, M., Foraker, R. & Beheshti, R., 2021, Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021. Huang, Y., Kurgan, L., Luo, F., Hu, X. T., Chen, Y., Dougherty, E., Kloczkowski, A. & Li, Y. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 726-731 6 p. (Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Using Experience-Based Co-design to Develop mHealth App for Digital Pulmonary Rehabilitation Management of Patients with Chronic Obstructive Pulmonary Disease (COPD)

An, Q., Kelley, M. M. & Yen, P. Y., 2021, HCI International 2021 - Late Breaking Posters - 23rd HCI International Conference, HCII 2021, Proceedings. Stephanidis, C., Antona, M. & Ntoa, S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 125-133 9 p. (Communications in Computer and Information Science; vol. 1499 CCIS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

2020

Integrative radiomic analysis for pre-surgical prognostic stratification of glioblastoma patients: from advanced to basic MRI protocols

Bakas, S., Shukla, G., Akbari, H., Erus, G., Sotiras, A., Rathore, S., Sako, C., Ha, S. M., Rozycki, M., Singh, A., Shinohara, R., Bilello, M. & Davatzikos, C., 2020, Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling. Fei, B. & Linte, C. A. (eds.). SPIE, 113151S. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11315).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

3 Scopus citations

MAGIC: Multi-scale Heterogeneity Analysis and Clustering for Brain Diseases

Wen, J., Varol, E., Chand, G., Sotiras, A. & Davatzikos, C., 2020, Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings. Martel, A. L., Abolmaesumi, P., Stoyanov, D., Mateus, D., Zuluaga, M. A., Zhou, S. K., Racoceanu, D. & Joskowicz, L. (eds.). Springer Science and Business Media Deutschland GmbH, p. 678-687 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12267 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

The cancer imaging phenomics toolkit (CaPTk): Technical overview

Pati, S., Singh, A., Rathore, S., Gastounioti, A., Bergman, M., Ngo, P., Ha, S. M., Bounias, D., Minock, J., Murphy, G., Li, H., Bhattarai, A., Wolf, A., Sridaran, P., Kalarot, R., Akbari, H., Sotiras, A., Thakur, S. P., Verma, R., Shinohara, R. T., & 5 othersYushkevich, P., Fan, Y., Kontos, D., Davatzikos, C. & Bakas, S., 2020, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 5th International Workshop, BrainLes 2019, Held in Conjunction with MICCAI 2019, Revised Selected Papers. Crimi, A. & Bakas, S. (eds.). Springer, p. 380-394 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11993 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

21 Scopus citations

2018

Echo: A large display interactive visualization of ICU data for effective care handoffs

Thomas, M. M., Kannampallil, T., Abraham, J. & Marai, G. E., Jun 15 2018, 2017 IEEE Workshop on Visual Analytics in Healthcare, VAHC 2017. Institute of Electrical and Electronics Engineers Inc., p. 47-54 8 p. (2017 IEEE Workshop on Visual Analytics in Healthcare, VAHC 2017).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

8 Scopus citations

Effect of handoff training on resident communication quality: An observational study

Abraham, J., Kannampallil, T. G., Ward, C. E., Bogan, C. & Hyderi, A., 2018, Proceedings of the 51st Annual Hawaii International Conference on System Sciences, HICSS 2018. Bui, T. X. (ed.). IEEE Computer Society, p. 2926-2935 10 p. (Proceedings of the Annual Hawaii International Conference on System Sciences; vol. 2018-January).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

5 Scopus citations

Generative discriminative models for multivariate inference and statistical mapping in medical imaging

Varol, E., Sotiras, A., Zeng, K. & Davatzikos, C., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Davatzikos, C., Fichtinger, G., Alberola-López, C. & Schnabel, J. A. (eds.). Springer Verlag, p. 540-548 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11072 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

3 Scopus citations

Jointly Embedding Entities and Text with Distant Supervision

Newman-Griffis, D., Lai, A. M. & Fosler-Lussier, E., 2018, ACL 2018 - Representation Learning for NLP, Proceedings of the 3rd Workshop. Association for Computational Linguistics (ACL), p. 195-206 12 p. (Proceedings of the Annual Meeting of the Association for Computational Linguistics).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

13 Scopus citations

QoE Tuning for remote access of interactive volume visualization applications

Jonesi, S., Adams, J., Valluripally, S., Calyam, P., Hittle, B. & Lai, A., Nov 28 2018, 2018 IEEE International Conference on Multimedia and Expo Workshops, ICMEW 2018. Institute of Electrical and Electronics Engineers Inc., 8551560. (2018 IEEE International Conference on Multimedia and Expo Workshops, ICMEW 2018).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

Regionally discriminative multivariate statistical mapping

Varol, E., Sotiras, A. & Davatzikos, C., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 1560-1563 4 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

Statistically-constrained robust diffeomorphic registration

Zeng, K., Sotiras, A. & Davatzikos, C., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 1083-1087 5 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2017

Inductive identification of functional status information and establishing a gold standard corpus: A case study on the Mobility domain

Thieu, T., Camacho, J., Ho, P. S., Porcino, J., Ding, M., Nelson, L., Rasch, E., Zhou, C., Chan, L., Brandt, D., Newman-Griffis, D., Yuan, A. & Lai, A. M., Dec 15 2017, Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017. Yoo, I., Zheng, J. H., Gong, Y., Hu, X. T., Shyu, C-R., Bromberg, Y., Gao, J. & Korkin, D. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2319-2321 3 p. (Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017; vol. 2017-January).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

7 Scopus citations

Insights into Analogy Completion from the Biomedical Domain

Newman-Griffis, D., Lai, A. M. & Fosler-Lussier, E., 2017, BioNLP 2017 - SIGBioMed Workshop on Biomedical Natural Language Processing, Proceedings of the 16th BioNLP Workshop. Association for Computational Linguistics (ACL), p. 19-28 10 p. (BioNLP 2017 - SIGBioMed Workshop on Biomedical Natural Language Processing, Proceedings of the 16th BioNLP Workshop).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

9 Scopus citations

Visualizing article similarities via sparsified article network and map projection for systematic reviews

Ji, X., Machiraju, R., Ritter, A. & Yen, P. Y., 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. Dongsheng, Z., Gundlapalli, A. V. & Marie-Christine, J. (eds.). IOS Press, p. 422-426 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

4 Scopus citations

2016

Communication Patterns in a Collaborative Medication Scheduling Task among Older Adults

Kannampallil, T. G., Morrow, D. G., Fu, W. T., Raquel, L. & Muriset, A., Dec 6 2016, Proceedings - 2016 IEEE International Conference on Healthcare Informatics, ICHI 2016. Fu, W-T., Zheng, K., Hodges, L., Stiglic, G. & Blandford, A. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 367-374 8 p. 7776385. (Proceedings - 2016 IEEE International Conference on Healthcare Informatics, ICHI 2016).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

DrugMoaMiner: A computational tool for mechanism of action discovery and personalized drug sensitivity prediction

Li, F., Wang, L., Kong, R., Sheng, J., Cao, H., Mancuso, J., Xia, X., Stephan, C. & Wong, S. T. C., Apr 18 2016, 3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016. Institute of Electrical and Electronics Engineers Inc., p. 368-371 4 p. 7455911. (3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

4 Scopus citations

GLISTRboost: Combining multimodal MRI segmentation, registration, and biophysical tumor growth modeling with gradient boosting machines for glioma segmentation

Bakas, S., Zeng, K., Sotiras, A., Rathore, S., Akbari, H., Gaonkar, B., Rozycki, M., Pati, S. & Davatzikos, C., Jan 1 2016, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 1st International Workshop, Brainles 2015 Held in Conjunction with MICCAI 2015, Revised Selected Papers. Reyes, M., Crimi, A., Maier, O., Maier, O., Handels, H. & Menze, B. (eds.). Springer Verlag, p. 144-155 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9556).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

69 Scopus citations

Identification, characterization, and grounding of gradable terms in clinical text

Shivade, C., De Marneffe, M. C., Fosler-Lussier, E. & Lai, A. M., 2016, BioNLP 2016 - Proceedings of the 15th Workshop on Biomedical Natural Language Processing. Cohen, K. B., Demner-Fushman, D., Ananiadou, S. & Tsujii, J. (eds.). Association for Computational Linguistics (ACL), p. 17-26 10 p. (BioNLP 2016 - Proceedings of the 15th Workshop on Biomedical Natural Language Processing).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

5 Scopus citations

Segmentation of gliomas in pre-operative and post-operative multimodal magnetic resonance imaging volumes based on a hybrid generative-discriminative framework

Zeng, K., Bakas, S., Sotiras, A., Akbari, H., Rozycki, M., Rathore, S., Pati, S. & Davatzikos, C., 2016, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - Second International Workshop, BrainLes 2016, with the Challenges on BRATS, ISLES and mTOP 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers. Menze, B., Reyes, M., Crimi, A., Maier, O., Winzeck, S. & Handels, H. (eds.). Springer Verlag, p. 184-194 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10154 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

19 Scopus citations

Structured outlier detection in neuroimaging studies with minimal convex polytopes

Varol, E., Sotiras, A. & Davatzikos, C., 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Ourselin, S., Joskowicz, L., Sabuncu, M. R., Wells, W. & Unal, G. (eds.). Springer Verlag, p. 300-307 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9900 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

2015

A Metadata based Knowledge Discovery Methodology for Seeding Translational Research

Kothari, C. R. & Payne, P. R. O., 2015, MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. Georgiou, A., Sarkar, I. N. & de Azevedo Marques, P. M. (eds.). IOS Press, p. 1071 1 p. (Studies in Health Technology and Informatics; vol. 216).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

Conceptual Knowledge Discovery in Databases for Drug Combinations Predictions in Malignant Melanoma

Regan, K., Raje, S., Saravanamuthu, C. & Payne, P. R. O., 2015, MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. Georgiou, A., Sarkar, I. N. & de Azevedo Marques, P. M. (eds.). IOS Press, p. 663-667 5 p. (Studies in Health Technology and Informatics; vol. 216).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

3 Scopus citations

Corpus-based discovery of semantic intensity scales

Shivade, C., De Marneffe, M. C., Fosler-Lussier, E. & Lai, A. M., 2015, NAACL HLT 2015 - 2015 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, Proceedings of the Conference. Association for Computational Linguistics (ACL), p. 483-493 11 p. (NAACL HLT 2015 - 2015 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, Proceedings of the Conference).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

8 Scopus citations

Domain Analysis of Integrated Data to Reduce Cost Associated with Liver Disease

Motiwala, T., Kite, B., Regan, K., Gascon, G. M. & Payne, P. R. O., 2015, MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. Georgiou, A., Sarkar, I. N. & de Azevedo Marques, P. M. (eds.). IOS Press, p. 414-418 5 p. (Studies in Health Technology and Informatics; vol. 216).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Graph-based motion-driven segmentation of the carotid atherosclerotique plaque in 2D ultrasound sequences

Gastounioti, A., Sotiras, A., Nikita, K. S. & Paragios, N., 2015, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2015 - 18th International Conference, Proceedings. Frangi, A. F., Navab, N., Hornegger, J. & Wells, W. M. (eds.). Springer Verlag, p. 551-559 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9351).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

5 Scopus citations

Local atlas selection for discrete multi-atlas segmentation

Alchatzidis, S., Sotiras, A. & Paragios, N., Jul 21 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging, ISBI 2015. IEEE Computer Society, p. 363-367 5 p. 7163888. (Proceedings - International Symposium on Biomedical Imaging; vol. 2015-July).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

3 Scopus citations

Modular linear iconic matching using higher order graphs

Fecamp, V., Sotiras, A. & Paragios, N., Jul 21 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging, ISBI 2015. IEEE Computer Society, p. 1097-1101 5 p. 7164063. (Proceedings - International Symposium on Biomedical Imaging; vol. 2015-July).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2 Scopus citations

Real-time Data Fusion Platforms: The Need of Multi-dimensional Data-driven Research in Biomedical Informatics

Raje, S., Kite, B., Ramanathan, J. & Payne, P., 2015, MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. Georgiou, A., Sarkar, I. N. & de Azevedo Marques, P. M. (eds.). IOS Press, p. 1107 1 p. (Studies in Health Technology and Informatics; vol. 216).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

Text Mining and Data Modeling of Karyotypes to aid in Drug Repurposing Efforts

Abrams, Z. B., Peabody, A. L., Heerema, N. A. & Payne, P. R. O., 2015, MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. Georgiou, A., Sarkar, I. N. & de Azevedo Marques, P. M. (eds.). IOS Press, p. 1037 1 p. (Studies in Health Technology and Informatics; vol. 216).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

4 Scopus citations

2014

An integrated analytic pipeline for identifying and predicting genetic interactions based on perturbation data from high content double RNAi screening

Yin, Z., Li, F. & Wong, S. T. C., 2014, Proceedings of the XSEDE 2014 Conference: Engaging Communities. Association for Computing Machinery, 7. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Cross-narrative temporal ordering of medical events

Raghavan, P., Fosler-Lussier, E., Elhadad, N. & Lai, A. M., 2014, Long Papers. Association for Computational Linguistics (ACL), p. 998-1008 11 p. (52nd Annual Meeting of the Association for Computational Linguistics, ACL 2014 - Proceedings of the Conference; vol. 1).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Open Access

13 Scopus citations

Efficient and automated multimodal satellite data registration through MRFs and linear programming

Karantzalos, K., Sotiras, A. & Paragios, N., Sep 24 2014, Proceedings - 2014 IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2014. IEEE Computer Society, p. 335-342 8 p. 6910003. (IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

21 Scopus citations

Quantifying physician activities in emergency care: An exploratory study

Abraham, J. & Kannampallil, T. G., 2014, 2014 International Annual Meeting of the Human Factors and Ergonomics Society, HFES 2014. Human Factors an Ergonomics Society Inc., p. 798-802 5 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 2014-January).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

Towards symbiosis in knowledge representation and natural language processing for structuring clinical practice guidelines

Weng, C., Payne, P. R. O., Velez, M., Johnson, S. B. & Bakken, S., 2014, Nursing Informatics 2014: East Meets West eSMART+ - Proceedings of the 12th International Congress on Nursing Informatics, NI 2014. IOS Press, p. 461-469 9 p. (Studies in Health Technology and Informatics; vol. 201).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

3 Scopus citations

2013

A novel geodesic distance based clustering approach to delineating boundaries of touching cells

Chen, X., Zhu, Y., Li, F., Zheng, Z., Chang, E., Ma, J. & Wong, S. T. C., 2013, Advances in Neural Networks, ISNN 2013 - 10th International Symposium on Neural Networks, Proceedings. PART 2 ed. Springer Verlag, p. 315-322 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7952 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

2 Scopus citations

Deriving statistical significance maps for support vector regression using medical imaging data

Gaonkar, B., Sotiras, A. & Davatzikos, C., 2013, Proceedings - 2013 3rd International Workshop on Pattern Recognition in Neuroimaging, PRNI 2013. p. 13-16 4 p. 6603545. (Proceedings - 2013 3rd International Workshop on Pattern Recognition in Neuroimaging, PRNI 2013).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

4 Scopus citations

Integrating population- and patient-level data for secondary use of electronic health records to study overweight and obesity

Roth, C., Shivade, C. P., Foraker, R. E. & Embi, P. J., Jan 1 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, 1 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

6 Scopus citations

Re-coordinating activities: An investigation of articulation work in patient transfers

Abraham, J. & Reddy, M. C., 2013, CSCW 2013 - Proceedings of the 2013 ACM Conference on Computer Supported Cooperative Work. p. 67-78 12 p. (Proceedings of the ACM Conference on Computer Supported Cooperative Work, CSCW).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

28 Scopus citations

Sparse classification with MRI based markers for neuromuscular disease categorization

Gkirtzou, K., Deux, J. F., Bassez, G., Sotiras, A., Rahmouni, A., Varacca, T., Paragios, N. & Blaschko, M. B., 2013, Machine Learning in Medical Imaging - 4th International Workshop, MLMI 2013, Held in Conjunction with MICCAI 2013, Proceedings. Springer Verlag, p. 33-40 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8184 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

2012

A 3-dimentional multiscale model to simulate tumor progression in response to interactions between cancer stem cells and tumor microenvironmental factors

Tan, H., Li, F., Singh, J., Xia, X., Cridebring, D., Yang, J., Zhan, M., Wong, S. T. C., Bao, J. & Ma, J., 2012, 2012 IEEE 6th International Conference on Systems Biology, ISB 2012. p. 297-303 7 p. 6314153. (2012 IEEE 6th International Conference on Systems Biology, ISB 2012).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

7 Scopus citations

Discrete symmetric image registration

Sotiras, A. & Paragios, N., Aug 15 2012, 2012 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2012 - Proceedings. p. 342-345 4 p. 6235554. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

9 Scopus citations

Institute for Informatics, Data Science and Biostatistics

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