Institute for Informatics, Data Science and Biostatistics (I2DB)

Search results

  • Conference contribution

    Differential diagnosis of human lung cancer A label-free and chemistry-sensitive approach

    Gao, L., Yang, Y., Xing, J., Thrall, M. J., Wang, Z., Li, F., Luo, P., Wong, K. K. & Wong, S. T. C., 2011, Proceedings of the 2011 IEEE/NIH Life Science Systems and Applications Workshop, LiSSA 2011. p. 14-17 4 p. 5754143. (Proceedings of the 2011 IEEE/NIH Life Science Systems and Applications Workshop, LiSSA 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Discrete symmetric image registration

    Sotiras, A. & Paragios, N., 2012, 2012 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2012 - Proceedings. p. 342-345 4 p. 6235554. (Proceedings - International Symposium on Biomedical Imaging).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    10 Scopus citations

  • Document-level Clinical Entity and Relation Extraction via Knowledge Base-Guided Generation

    Bhattarai, K., Oh, I. Y., Abrams, Z. B. & Lai, A. M., 2024, BioNLP 2024 - 23rd Meeting of the ACL Special Interest Group on Biomedical Natural Language Processing, Proceedings of the Workshop and Shared Tasks. Demner-Fushman, D., Ananiadou, S., Miwa, M., Roberts, K. & Tsujii, J. (eds.). Association for Computational Linguistics (ACL), p. 318-327 10 p. (BioNLP 2024 - 23rd Meeting of the ACL Special Interest Group on Biomedical Natural Language Processing, Proceedings of the Workshop and Shared Tasks).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Domain Analysis of Integrated Data to Reduce Cost Associated with Liver Disease

    Motiwala, T., Kite, B., Regan, K., Gascon, G. M. & Payne, P. R. O., 2015, MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. Georgiou, A., Sarkar, I. N. & de Azevedo Marques, P. M. (eds.). IOS Press, p. 414-418 5 p. (Studies in Health Technology and Informatics; vol. 216).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • DrugMoaMiner: A computational tool for mechanism of action discovery and personalized drug sensitivity prediction

    Li, F., Wang, L., Kong, R., Sheng, J., Cao, H., Mancuso, J., Xia, X., Stephan, C. & Wong, S. T. C., Apr 18 2016, 3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016. Institute of Electrical and Electronics Engineers Inc., p. 368-371 4 p. 7455911. (3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • Echo: A large display interactive visualization of ICU data for effective care handoffs

    Thomas, M. M., Kannampallil, T., Abraham, J. & Marai, G. E., Jun 15 2018, 2017 IEEE Workshop on Visual Analytics in Healthcare, VAHC 2017. Institute of Electrical and Electronics Engineers Inc., p. 47-54 8 p. (2017 IEEE Workshop on Visual Analytics in Healthcare, VAHC 2017).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    14 Scopus citations

  • Effect of handoff training on resident communication quality: An observational study

    Abraham, J., Kannampallil, T. G., Ward, C. E., Bogan, C. & Hyderi, A., 2018, Proceedings of the 51st Annual Hawaii International Conference on System Sciences, HICSS 2018. Bui, T. X. (ed.). IEEE Computer Society, p. 2926-2935 10 p. (Proceedings of the Annual Hawaii International Conference on System Sciences; vol. 2018-January).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Efficient and automated multimodal satellite data registration through MRFs and linear programming

    Karantzalos, K., Sotiras, A. & Paragios, N., Sep 24 2014, Proceedings - 2014 IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2014. IEEE Computer Society, p. 335-342 8 p. 6910003. (IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    22 Scopus citations

  • Efficient parallel message computation for MAP inference

    Alchatzidis, S., Sotiras, A. & Paragios, N., 2011, 2011 International Conference on Computer Vision, ICCV 2011. p. 1379-1386 8 p. 6126392. (Proceedings of the IEEE International Conference on Computer Vision).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Evaluating and Improvi g the Performance and Racial Fairness of Algori ims for GFR Estimation

    Zhang, L., Kim, T., Richter, L. R. & Hripcsak, G., 2024, Proceedings - 2024 IEEE 1st International Conference on Artificial Intelligence for Medicine, Health and Care, AIMHC 2024. Institute of Electrical and Electronics Engineers Inc., p. 251-257 7 p. (Proceedings - 2024 IEEE 1st International Conference on Artificial Intelligence for Medicine, Health and Care, AIMHC 2024).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access

  • Evaluating tagging behavior in social bookmarking systems: Metrics and design heuristics

    Farooq, U., Kannampallil, T. G., Song, Y., Ganoe, C. H., Carroll, J. M. & Giles, L., 2007, GROUP'07 - Proceedings of the 2007 International ACM Conference on Supporting Group Work. p. 351-360 10 p. (GROUP'07 - Proceedings of the 2007 International ACM Conference on Supporting Group Work).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    74 Scopus citations

  • Exploiting knowledge-in-the-head and knowledge-in-the-social-web: Effects of domain expertise on exploratory search in individual and social search environments

    Kang, R., Fu, W. T. & Kannampallil, T. G., Jul 1 2010, CHI 2010 - The 28th Annual CHI Conference on Human Factors in Computing Systems, Conference Proceedings. p. 393-402 10 p. (Conference on Human Factors in Computing Systems - Proceedings; vol. 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    14 Scopus citations

  • Exploring semi-supervised coreference resolution of medical concepts using semantic and temporal features

    Raghavan, P., Fosler-Lussier, E. & Lai, A. M., 2012, Proceedings of the 2012 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies. Association for Computational Linguistics (ACL), p. 731-741 11 p. (NAACL HLT 2012 - 2012 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, Proceedings of the Conference).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    9 Scopus citations

  • Facilitating exploratory search by model-based navigational cues

    Fu, W. T., Kannampallil, T. G. & Kang, R., 2010, IUI 2010 - Proceedings of the 14th ACM International Conference on Intelligent User Interfaces. p. 199-208 10 p. (International Conference on Intelligent User Interfaces, Proceedings IUI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    17 Scopus citations

  • Generative discriminative models for multivariate inference and statistical mapping in medical imaging

    Varol, E., Sotiras, A., Zeng, K. & Davatzikos, C., 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Davatzikos, C., Fichtinger, G., Alberola-López, C. & Schnabel, J. A. (eds.). Springer Verlag, p. 540-548 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11072 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    9 Scopus citations

  • GLISTRboost: Combining multimodal MRI segmentation, registration, and biophysical tumor growth modeling with gradient boosting machines for glioma segmentation

    Bakas, S., Zeng, K., Sotiras, A., Rathore, S., Akbari, H., Gaonkar, B., Rozycki, M., Pati, S. & Davatzikos, C., Jan 1 2016, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 1st International Workshop, Brainles 2015 Held in Conjunction with MICCAI 2015, Revised Selected Papers. Reyes, M., Crimi, A., Maier, O., Maier, O., Handels, H. & Menze, B. (eds.). Springer Verlag, p. 144-155 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9556).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    83 Scopus citations

  • Graph-based motion-driven segmentation of the carotid atherosclerotique plaque in 2D ultrasound sequences

    Gastounioti, A., Sotiras, A., Nikita, K. S. & Paragios, N., 2015, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2015 - 18th International Conference, Proceedings. Frangi, A. F., Navab, N., Hornegger, J. & Wells, W. M. (eds.). Springer Verlag, p. 551-559 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9351).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    5 Scopus citations

  • Graphical models and deformable diffeomorphic population registration using global and local metrics

    Sotiras, A., Komodakis, N., Glocker, B., Deux, J. F. & Paragios, N., 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009 - 12th International Conference, Proceedings. PART 1 ed. Springer Verlag, p. 672-679 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5761 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    19 Scopus citations

  • Handling objects: A scenario based approach

    Kannampallil, T. G. & Daughtry, J. M., 2006, ACM SIGDOC 2006 - Proceedings of the 24th ACM International Conference on Design of Communication. p. 92-98 7 p. (ACM SIGDOC 2006 - Proceedings of the 24th ACM International Conference on Design of Communication).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • High content image sequence analysis for quantifying calcium signals inside cells with mutant presenilin-1 of familial alzheimer disease

    Li, F., Zhou, X., Zhu, J., Ma, J. & Wong, S. T. C., Jan 1 2007, 2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA. IEEE Computer Society, p. 31-34 4 p. 4400877. (2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • HiPAL: A Deep Framework for Physician Burnout Prediction Using Activity Logs in Electronic Health Records

    Liu, H., Lou, S. S., Warner, B. C., Harford, D. R., Kannampallil, T. & Lu, C., Aug 14 2022, KDD 2022 - Proceedings of the 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining. Association for Computing Machinery, p. 3377-3387 11 p. (Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    5 Scopus citations

  • How Powerful are K-hop Message Passing Graph Neural Networks

    Feng, J., Chen, Y., Li, F., Sarkar, A. & Zhang, M., 2022, Advances in Neural Information Processing Systems 35 - 36th Conference on Neural Information Processing Systems, NeurIPS 2022. Koyejo, S., Mohamed, S., Agarwal, A., Belgrave, D., Cho, K. & Oh, A. (eds.). Neural information processing systems foundation, (Advances in Neural Information Processing Systems; vol. 35).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    80 Scopus citations

  • Identification, characterization, and grounding of gradable terms in clinical text

    Shivade, C., De Marneffe, M. C., Fosler-Lussier, E. & Lai, A. M., 2016, BioNLP 2016 - Proceedings of the 15th Workshop on Biomedical Natural Language Processing. Cohen, K. B., Demner-Fushman, D., Ananiadou, S. & Tsujii, J.-I. (eds.). Association for Computational Linguistics (ACL), p. 17-26 10 p. (BioNLP 2016 - Proceedings of the 15th Workshop on Biomedical Natural Language Processing).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Improving Normative Modeling for Multi-Modal Neuroimaging Data Using Mixture-of-Product-of-Experts Variational Autoencoders

    Kumar, S., Payne, P. & Sotiras, A., 2024, IEEE International Symposium on Biomedical Imaging, ISBI 2024 - Conference Proceedings. IEEE Computer Society, (Proceedings - International Symposium on Biomedical Imaging).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    2 Scopus citations

  • Improving web browsing on wireless PDAs using thin-client computing

    Lai, A. M., Nieh, J., Bohra, B., Nandikonda, V., Surana, A. P. & Varshneya, S., Dec 1 2004, Thirteenth International World Wide Web Conference Proceedings, WWW2004. p. 143-154 12 p. (Thirteenth International World Wide Web Conference Proceedings, WWW2004).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    22 Scopus citations

  • Inductive identification of functional status information and establishing a gold standard corpus: A case study on the Mobility domain

    Thieu, T., Camacho, J., Ho, P. S., Porcino, J., Ding, M., Nelson, L., Rasch, E., Zhou, C., Chan, L., Brandt, D., Newman-Griffis, D., Yuan, A. & Lai, A. M., Dec 15 2017, Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017. Yoo, I., Zheng, J. H., Gong, Y., Hu, X. T., Shyu, C.-R., Bromberg, Y., Gao, J. & Korkin, D. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2319-2321 3 p. (Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017; vol. 2017-January).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    7 Scopus citations

  • Insights into Analogy Completion from the Biomedical Domain

    Newman-Griffis, D., Lai, A. M. & Fosler-Lussier, E., 2017, BioNLP 2017 - SIGBioMed Workshop on Biomedical Natural Language Processing, Proceedings of the 16th BioNLP Workshop. Association for Computational Linguistics (ACL), p. 19-28 10 p. (BioNLP 2017 - SIGBioMed Workshop on Biomedical Natural Language Processing, Proceedings of the 16th BioNLP Workshop).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    13 Scopus citations

  • Integrating multi-scale blob/curvilinear detector techniques and multilevel sets for automated segmentation of stem cell images

    Peng, H., Zhou, X., Li, F., Xia, X. & Wong, S. T. C., 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. p. 1362-1365 4 p. 5193318. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    17 Scopus citations

  • Integrating population- and patient-level data for secondary use of electronic health records to study overweight and obesity

    Roth, C., Shivade, C. P., Foraker, R. E. & Embi, P. J., 2013, MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics. 1-2 ed. IOS Press, p. 1100 1 p. (Studies in Health Technology and Informatics; vol. 192, no. 1-2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • Integrative radiomic analysis for pre-surgical prognostic stratification of glioblastoma patients: from advanced to basic MRI protocols

    Bakas, S., Shukla, G., Akbari, H., Erus, G., Sotiras, A., Rathore, S., Sako, C., Ha, S. M., Rozycki, M., Singh, A., Shinohara, R., Bilello, M. & Davatzikos, C., 2020, Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling. Fei, B. & Linte, C. A. (eds.). SPIE, 113151S. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11315).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • Investigating the Impact of Temporal Labeling of Emergency Department Visits for COVID-19: Comparing Healthcare Disparities Analyses Using Comprehensive, Single-Site Data with National COVID Cohort Collaborative (N3C) Data

    Jones, M., Winger, A., Wernz, C., Michel, J., Jiang, S., Zhou, A., Hilton, E. J., Zemmel, M., Sengupta, S., Barnes, K., Loomba, J., Brown, D. E., Wilcox, A. B., Lee, A. M., Graves, A., Anzalone, A., Manna, A., Saha, A., Olex, A. & Williams, A. E. & 116 others, Southerland, A., Girvin, A. T., Walden, A., Sharathkumar, A. A., Amor, B., Bates, B., Hendricks, B., Patel, B., Alexander, C., Bramante, C., Ward-Caviness, C., Madlock-Brown, C., Suver, C., Chute, C., Dillon, C., Wu, C., Schmitt, C., Takemoto, C., Housman, D., Gabriel, D., Eichmann, D. A., Mazzotti, D., Boudreau, E., Hill, E., Zampino, E., Marti, E. C., Pfaff, E. R., French, E., Koraishy, F. M., Mariona, F., Prior, F., Sokos, G., Martin, G., Lehmann, H., Spratt, H., Mehta, H., Liu, H., Sidky, H., Awori Hayanga, J. W., Pincavitch, J., Clark, J., Richard Harper, J., Islam, J., Ge, J., Gagnier, J., Saltz, J. H., Buse, J., Mathew, J., Rutter, J. L., McMurry, J. A., Guinney, J., Starren, J., Crowley, K., Bradwell, K. R., Walters, K. M., Wilkins, K., Gersing, K. R., Cato, K. D., Murray, K., Kostka, K., Northington, L., Pyles, L. A., Misquitta, L., Cottrell, L., Portilla, L., Deacy, M., Bissell, M. M., Clark, M., Emmett, M., Saltz, M. M., Palchuk, M. B., Haendel, M. A., Adams, M., Temple-O'Connor, M., Kurilla, M. G., Morris, M., Qureshi, N., Safdar, N., Garbarini, N., Sharafeldin, N., Sadan, O., Francis, P. A., Burgoon, P. W., Robinson, P., Payne, P. R. O., Fuentes, R., Jawa, R., Erwin-Cohen, R., Patel, R., Moffitt, R. A., Zhu, R. L., Kamaleswaran, R., Hurley, R., Miller, R. T., Pyarajan, S., Michael, S. G., Bozzette, S., Mallipattu, S., Vedula, S., Chapman, S., O'Neil, S. T., Setoguchi, S., Hong, S. S., Johnson, S., Bennett, T. D., Callahan, T., Topaloglu, U., Sheikh, U., Gordon, V., Subbian, V., Kibbe, W. A., Hernandez, W., Beasley, W., Cooper, W., Hillegass, W. & Zhang, X. T., 2023, 2023 Systems and Information Engineering Design Symposium, SIEDS 2023. Institute of Electrical and Electronics Engineers Inc., p. 297-302 6 p. (2023 Systems and Information Engineering Design Symposium, SIEDS 2023).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access

  • Jointly Embedding Entities and Text with Distant Supervision

    Newman-Griffis, D., Lai, A. M. & Fosler-Lussier, E., 2018, ACL 2018 - Representation Learning for NLP, Proceedings of the 3rd Workshop. Association for Computational Linguistics (ACL), p. 195-206 12 p. (Proceedings of the Annual Meeting of the Association for Computational Linguistics).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    20 Scopus citations

  • Learning to temporally order medical events in clinical text

    Raghavan, P., Fosler-Lussier, E. & Lai, A. M., 2012, 50th Annual Meeting of the Association for Computational Linguistics, ACL 2012 - Proceedings of the Conference. p. 70-74 5 p. (50th Annual Meeting of the Association for Computational Linguistics, ACL 2012 - Proceedings of the Conference; vol. 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    12 Scopus citations

  • Leveraging natural language processing of clinical narratives for phenotype modeling

    Raghavan, P. & Lai, A. M., 2010, Proceedings of the 3rd Workshop on Ph.D. Students in Information and Knowledge Management, PIKM'10, Co-located with 19th International Conference on Information and Knowledge Management, CIKM'10. p. 57-65 9 p. (International Conference on Information and Knowledge Management, Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Local atlas selection for discrete multi-atlas segmentation

    Alchatzidis, S., Sotiras, A. & Paragios, N., Jul 21 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging, ISBI 2015. IEEE Computer Society, p. 363-367 5 p. 7163888. (Proceedings - International Symposium on Biomedical Imaging; vol. 2015-July).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • MAGIC: Multi-scale Heterogeneity Analysis and Clustering for Brain Diseases

    Wen, J., Varol, E., Chand, G., Sotiras, A. & Davatzikos, C., 2020, Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 - 23rd International Conference, Proceedings. Martel, A. L., Abolmaesumi, P., Stoyanov, D., Mateus, D., Zuluaga, M. A., Zhou, S. K., Racoceanu, D. & Joskowicz, L. (eds.). Springer Science and Business Media Deutschland GmbH, p. 678-687 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12267 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Medical event coreference resolution using the UMLS metathesaurus and temporal reasoning

    Raghavan, P., Brew, C., Fosler-Lussier, E. & Lai, A. M., 2012, IHI'12 - Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium. p. 465-472 8 p. (IHI'12 - Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • MFCC and SVM based recognition of Chinese vowels

    Li, F., Ma, J. & Huang, D., 2005, Computational Intelligence and Security - International Conference, CIS 2005, Proceedings. p. 812-819 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3802 LNAI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    20 Scopus citations

  • Mitosis cell identification with conditional random fields

    Liang, L., Zhou, X., Li, F., Wong, S. T. C., Huckins, J. & King, R. W., 2007, 2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA. IEEE Computer Society, p. 9-12 4 p. 4400872. (2007 IEEE/NIH Life Science Systems and Applications Workshop, LISA).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    24 Scopus citations

  • Modular linear iconic matching using higher order graphs

    Fecamp, V., Sotiras, A. & Paragios, N., Jul 21 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging, ISBI 2015. IEEE Computer Society, p. 1097-1101 5 p. 7164063. (Proceedings - International Symposium on Biomedical Imaging; vol. 2015-July).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Morphological Versus Functional Network Organization: A Comparison Between Structural Covariance Networks and Probabilistic Functional Modes

    Lenzini, P., Earnest, T., Min Ha, S., Bani, A., Sotiras, A. & Bijsterbosch, J., 2023, Machine Learning in Clinical Neuroimaging - 6th International Workshop, MLCN 2023, Held in Conjunction with MICCAI 2023, Proceedings. Abdulkadir, A., Bathula, D. R., Dvornek, N. C., Govindarajan, S. T., Habes, M., Kumar, V., Leonardsen, E., Wolfers, T. & Xiao, Y. (eds.). Springer Science and Business Media Deutschland GmbH, p. 163-172 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 14312 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Moving patients around: A field study of coordination between clinical and non-clinical staff in hospitals

    Abraham, J. & Reddy, M. C., 2008, CSCW 08 - Conference Proceedings, 2008 ACM Conference on Computer Supported Cooperative Work. p. 225-228 4 p. (Proceedings of the ACM Conference on Computer Supported Cooperative Work, CSCW).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    47 Scopus citations

  • Multimodal Variational Autoencoder: A Barycentric View

    Qiu, P., Zhu, W., Kumar, S., Chen, X., Yang, J., Sun, X., Razi, A., Wang, Y. & Sotiras, A., Apr 11 2025, Special Track on AI Alignment. Walsh, T., Shah, J. & Kolter, Z. (eds.). 19 ed. Association for the Advancement of Artificial Intelligence, p. 20060-20068 9 p. (Proceedings of the AAAI Conference on Artificial Intelligence; vol. 39, no. 19).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Multi-scale Multi-structure Siamese Network (MMSNet) for Primary Open-Angle Glaucoma Prediction

    Lin, M., Liu, L., Gorden, M., Kass, M., Tassel, S. V., Wang, F. & Peng, Y., 2022, Machine Learning in Medical Imaging - 13th International Workshop, MLMI 2022, Held in Conjunction with MICCAI 2022, Proceedings. Lian, C., Cao, X., Rekik, I., Xu, X. & Cui, Z. (eds.). Springer Science and Business Media Deutschland GmbH, p. 436-445 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13583 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    3 Scopus citations

  • Non-invasive classification of IDH mutation status of gliomas from multi-modal MRI using a 3D convolutional neural network

    Chakrabarty, S., LaMontagne, P., Shimony, J., Marcus, D. & Sotiras, A., 2023, Medical Imaging 2023: Computer-Aided Diagnosis. Iftekharuddin, K. M. & Chen, W. (eds.). SPIE, 124650W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12465).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Normative Modeling using Multimodal Variational Autoencoders to Identify Abnormal Brain Volume Deviations in Alzheimer's Disease

    Kumar, S., Payne, P. R. O. & Sotiras, A., 2023, Medical Imaging 2023: Computer-Aided Diagnosis. Iftekharuddin, K. M. & Chen, W. (eds.). SPIE, 1246503. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12465).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    7 Scopus citations

  • Novel cell segmentation and online learning algorithms for cell phase identification in automated time-lapse microscopy

    Wang, M., Zhou, X., Li, F., Huckins, J., King, R. W. & Wong, S. T. C., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 65-68 4 p. 4193223. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    22 Scopus citations

  • Novel nuclei segmentation and cell phase identification using Markov model

    Li, F., Zhou, X. & Wong, S. T. C., 2007, Computational Models For Life Sciences (CMLS '07) - 2007 International Symposium. p. 96-103 8 p. (AIP Conference Proceedings; vol. 952).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Online phenotype discovery in high-content RNAi screens using gap statistics

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