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  • 2020

    Asymmetries in the cilia of Chlamydomonas

    Dutcher, S. K., Feb 17 2020, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1792, 20190153.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • Massively Parallel Reporter Assays: Defining Functional Psychiatric Genetic Variants Across Biological Contexts

    Mulvey, B., Lagunas, T. & Dougherty, J. D., 2020, (Accepted/In press) In : Biological Psychiatry.

    Research output: Contribution to journalReview articlepeer-review

  • MicroRNAs as modulators of longevity and the aging process

    Kinser, H. E. & Pincus, Z., Mar 1 2020, In : Human genetics. 139, 3, p. 291-308 18 p.

    Research output: Contribution to journalReview articlepeer-review

    9 Scopus citations
  • The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

    Human Tumor Atlas Network, Apr 16 2020, In : Cell. 181, 2, p. 236-249 14 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    7 Scopus citations
  • The role of glia in protein aggregation

    Li, Q. & Haney, M. S., Sep 2020, In : Neurobiology of Disease. 143, 105015.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • 2019

    Developmental hypomyelination in Wolfram syndrome: New insights from neuroimaging and gene expression analyses

    Samara, A., Rahn, R., Neyman, O., Park, K. Y., Samara, A., Marshall, B., Dougherty, J. & Hershey, T., Dec 3 2019, In : Orphanet Journal of Rare Diseases. 14, 1, 279.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • Gene regulation and the architecture of complex human traits in the genomics era

    Boutwell, B. B. & White, M. A., Jun 2019, In : Current Opinion in Psychology. 27, p. 93-97 5 p.

    Research output: Contribution to journalReview articlepeer-review

  • Metabolic aspects of neuronal degeneration: From a NAD + point of view

    Sasaki, Y., Feb 2019, In : Neuroscience Research. 139, p. 9-20 12 p.

    Research output: Contribution to journalReview articlepeer-review

    12 Scopus citations
  • 2018

    Epigenetics of metabolic syndrome

    Carson, C. & Lawson, H. A., Nov 2018, In : Physiological genomics. 50, 11, p. 947-955 9 p.

    Research output: Contribution to journalReview articlepeer-review

    5 Scopus citations
  • Ironing out the details: Untangling dietary iron and genetic background in diabetes

    Miranda, M. A. & Lawson, H. A., Oct 5 2018, In : Nutrients. 10, 10, 1437.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    5 Scopus citations
  • Leveraging genomic data in smoking cessation trials in the era of precision medicine: Why and how

    On behalf of the Genetics and Treatment Workgroup of the Society for Research on Nicotine and Tobacco (SRNT), Mar 6 2018, In : Nicotine and Tobacco Research. 20, 4, p. 414-424 11 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    7 Scopus citations
  • The value of biosamples in smoking cessation trials: A review of genetic, metabolomic, and epigenetic findings

    on behalf of the Genetics and Treatment Networks of the Society for Research on Nicotine and Tobacco (SRNT), Mar 6 2018, In : Nicotine and Tobacco Research. 20, 4, p. 403-413 11 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    7 Scopus citations
  • 2017

    Engineering cell identity: establishing new gene regulatory and chromatin landscapes

    Guo, C. & Morris, S. A., Oct 2017, In : Current Opinion in Genetics and Development. 46, p. 50-57 8 p.

    Research output: Contribution to journalReview articlepeer-review

    11 Scopus citations
  • High-throughput screening in the C. elegans nervous system

    Kinser, H. E. & Pincus, Z., Apr 1 2017, In : Molecular and Cellular Neuroscience. 80, p. 192-197 6 p.

    Research output: Contribution to journalReview articlepeer-review

    9 Scopus citations
  • Human embryos cultured in vitro to 14 days

    Morris, S. A., Jan 1 2017, In : Open Biology. 7, 1, 170003.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    3 Scopus citations
  • In Silico Proficiency Testing for Clinical Next-Generation Sequencing

    Duncavage, E. J., Abel, H. J. & Pfeifer, J. D., Jan 1 2017, In : Journal of Molecular Diagnostics. 19, 1, p. 35-42 8 p.

    Research output: Contribution to journalReview articlepeer-review

    14 Scopus citations
  • Online resources for studies of genome biology and epigenetics

    Lee, P. J., Choudhary, M. NK. & Wang, T., Oct 2017, In : Current Opinion in Toxicology. 6, p. 34-41 8 p.

    Research output: Contribution to journalReview articlepeer-review

  • Recurrent de novo mutations in neurodevelopmental disorders: Properties and clinical implications

    Wilfert, A. B., Sulovari, A., Turner, T. N., Coe, B. P. & Eichler, E. E., Nov 27 2017, In : Genome medicine. 9, 1, 101.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    34 Scopus citations
  • Systems biology in the central nervous system: A brief perspective on essential recent advancements

    Dougherty, J. D., Yang, C. & Lake, A. M., Jun 2017, In : Current Opinion in Systems Biology. 3, p. 67-76 10 p.

    Research output: Contribution to journalReview articlepeer-review

    4 Scopus citations
  • 2016

    Axon Self-Destruction: New Links among SARM1, MAPKs, and NAD+ Metabolism

    Gerdts, J., Summers, D. W., Milbrandt, J. & DiAntonio, A., Feb 3 2016, In : Neuron. 89, 3, p. 449-460 12 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    146 Scopus citations
  • Evolution of Epigenetic Regulation in Vertebrate Genomes

    Lowdon, R. F., Jang, H. S. & Wang, T., May 1 2016, In : Trends in Genetics. 32, 5, p. 269-283 15 p.

    Research output: Contribution to journalReview articlepeer-review

    26 Scopus citations
  • Genetics and biology of primary ciliary dyskinesia

    Horani, A., Ferkol, T. W., Dutcher, S. K. & Brody, S. L., Mar 1 2016, In : Paediatric Respiratory Reviews. 18, p. 18-24 7 p.

    Research output: Contribution to journalReview articlepeer-review

    73 Scopus citations
  • The basal bodies of Chlamydomonas reinhardtii

    Dutcher, S. K. & O'Toole, E. T., Jan 1 2016, In : Cilia. 5, 1, 18.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    14 Scopus citations
  • The Pathogenesis of Nonalcoholic Fatty Liver Disease: Interplay between Diet, Gut Microbiota, and Genetic Background

    Yu, J., Marsh, S., Hu, J., Feng, W. & Wu, C., 2016, In : Gastroenterology Research and Practice. 2016, 2862173.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    64 Scopus citations
  • 2015

    A global reference for human genetic variation

    Auton, A., Abecasis, G. R., Altshuler, D. M., Durbin, R. M., Bentley, D. R., Chakravarti, A., Clark, A. G., Donnelly, P., Eichler, E. E., Flicek, P., Gabriel, S. B., Gibbs, R. A., Green, E. D., Hurles, M. E., Knoppers, B. M., Korbel, J. O., Lander, E. S., Lee, C., Lehrach, H., Mardis, E. R. & 457 others, Marth, G. T., McVean, G. A., Nickerson, D. A., Schmidt, J. P., Sherry, S. T., Wang, J., Wilson, R. K., Boerwinkle, E., Doddapaneni, H., Han, Y., Korchina, V., Kovar, C., Lee, S., Muzny, D., Reid, J. G., Zhu, Y., Chang, Y., Feng, Q., Fang, X., Guo, X., Jian, M., Jiang, H., Jin, X., Lan, T., Li, G., Li, J., Li, Y., Liu, S., Liu, X., Lu, Y., Ma, X., Tang, M., Wang, B., Wang, G., Wu, H., Wu, R., Xu, X., Yin, Y., Zhang, D., Zhang, W., Zhao, J., Zhao, M., Zheng, X., Gupta, N., Gharani, N., Toji, L. H., Gerry, N. P., Resch, A. M., Barker, J., Clarke, L., Gil, L., Hunt, S. E., Kelman, G., Kulesha, E., Leinonen, R., McLaren, W. M., Radhakrishnan, R., Roa, A., Smirnov, D., Smith, R. E., Streeter, I., Thormann, A., Toneva, I., Vaughan, B., Zheng-Bradley, X., Grocock, R., Humphray, S., James, T., Kingsbury, Z., Sudbrak, R., Albrecht, M. W., Amstislavskiy, V. S., Borodina, T. A., Lienhard, M., Mertes, F., Sultan, M., Timmermann, B., Yaspo, M. L., Fulton, L., Ananiev, V., Belaia, Z., Beloslyudtsev, D., Bouk, N., Chen, C., Church, D., Cohen, R., Cook, C., Garner, J., Hefferon, T., Kimelman, M., Liu, C., Lopez, J., Meric, P., O'Sullivan, C., Ostapchuk, Y., Phan, L., Ponomarov, S., Schneider, V., Shekhtman, E., Sirotkin, K., Slotta, D., Zhang, H., Balasubramaniam, S., Burton, J., Danecek, P., Keane, T. M., Kolb-Kokocinski, A., McCarthy, S., Stalker, J., Quail, M., Davies, C. J., Gollub, J., Webster, T., Wong, B., Zhan, Y., Campbell, C. L., Kong, Y., Marcketta, A., Yu, F., Antunes, L., Bainbridge, M., Sabo, A., Huang, Z., Coin, L. J. M., Fang, L., Li, Q., Li, Z., Lin, H., Liu, B., Luo, R., Shao, H., Xie, Y., Ye, C., Yu, C., Zhang, F., Zheng, H., Zhu, H., Alkan, C., Dal, E., Kahveci, F., Garrison, E. P., Kural, D., Lee, W. P., Leong, W. F., Stromberg, M., Ward, A. N., Wu, J., Zhang, M., Daly, M. J., DePristo, M. A., Handsaker, R. E., Banks, E., Bhatia, G., Del Angel, G., Genovese, G., Li, H., Kashin, S., McCarroll, S. A., Nemesh, J. C., Poplin, R. E., Yoon, S. C., Lihm, J., Makarov, V., Gottipati, S., Keinan, A., Rodriguez-Flores, J. L., Rausch, T., Fritz, M. H., Stütz, A. M., Beal, K., Datta, A., Herrero, J., Ritchie, G. R. S., Zerbino, D., Sabeti, P. C., Shlyakhter, I., Schaffner, S. F., Vitti, J., Cooper, D. N., Ball, E. V., Stenson, P. D., Barnes, B., Bauer, M., Cheetham, R. K., Cox, A., Eberle, M., Kahn, S., Murray, L., Peden, J., Shaw, R., Kenny, E. E., Batzer, M. A., Konkel, M. K., Walker, J. A., MacArthur, D. G., Lek, M., Herwig, R., Ding, L., Koboldt, D. C., Larson, D., Ye, K., Gravel, S., Swaroop, A., Chew, E., Lappalainen, T., Erlich, Y., Gymrek, M., Willems, T. F., Simpson, J. T., Shriver, M. D., Rosenfeld, J. A., Bustamante, C. D., Montgomery, S. B., De La Vega, F. M., Byrnes, J. K., Carroll, A. W., DeGorter, M. K., Lacroute, P., Maples, B. K., Martin, A. R., Moreno-Estrada, A., Shringarpure, S. S., Zakharia, F., Halperin, E., Baran, Y., Cerveira, E., Hwang, J., Malhotra, A., Plewczynski, D., Radew, K., Romanovitch, M., Zhang, C., Hyland, F. C. L., Craig, D. W., Christoforides, A., Homer, N., Izatt, T., Kurdoglu, A. A., Sinari, S. A., Squire, K., Xiao, C., Sebat, J., Antaki, D., Gujral, M., Noor, A., Ye, K., Burchard, E. G., Hernandez, R. D., Gignoux, C. R., Haussler, D., Katzman, S. J., Kent, W. J., Howie, B., Ruiz-Linares, A., Dermitzakis, E. T., Devine, S. E., Kang, H. M., Kidd, J. M., Blackwell, T., Caron, S., Chen, W., Emery, S., Fritsche, L., Fuchsberger, C., Jun, G., Li, B., Lyons, R., Scheller, C., Sidore, C., Song, S., Sliwerska, E., Taliun, D., Tan, A., Welch, R., Wing, M. K., Zhan, X., Awadalla, P., Hodgkinson, A., Li, Y., Shi, X., Quitadamo, A., Lunter, G., Marchini, J. L., Myers, S., Churchhouse, C., Delaneau, O., Gupta-Hinch, A., Kretzschmar, W., Iqbal, Z., Mathieson, I., Menelaou, A., Rimmer, A., Xifara, D. K., Oleksyk, T. K., Fu, Y., Liu, X., Xiong, M., Jorde, L., Witherspoon, D., Xing, J., Browning, B. L., Browning, S. R., Hormozdiari, F., Sudmant, P. H., Khurana, E., Tyler-Smith, C., Albers, C. A., Ayub, Q., Chen, Y., Colonna, V., Jostins, L., Walter, K., Xue, Y., Gerstein, M. B., Abyzov, A., Balasubramanian, S., Chen, J., Clarke, D., Fu, Y., Harmanci, A. O., Jin, M., Lee, D., Liu, J., Mu, X. J., Zhang, J., Zhang, Y., Hartl, C., Shakir, K., Degenhardt, J., Meiers, S., Raeder, B., Casale, F. P., Stegle, O., Lameijer, E. W., Hall, I., Bafna, V., Michaelson, J., Gardner, E. J., Mills, R. E., Dayama, G., Chen, K., Fan, X., Chong, Z., Chen, T., Chaisson, M. J., Huddleston, J., Malig, M., Nelson, B. J., Parrish, N. F., Blackburne, B., Lindsay, S. J., Ning, Z., Zhang, Y., Lam, H., Sisu, C., Challis, D., Evani, U. S., Lu, J., Nagaswamy, U., Yu, J., Li, W., Habegger, L., Yu, H., Cunningham, F., Dunham, I., Lage, K., Jespersen, J. B., Horn, H., Kim, D., Desalle, R., Narechania, A., Sayres, M. A. W., Mendez, F. L., Poznik, G. D., Underhill, P. A., Mittelman, D., Banerjee, R., Cerezo, M., Fitzgerald, T. W., Louzada, S., Massaia, A., Yang, F., Kalra, D., Hale, W., Dan, X., Barnes, K. C., Beiswanger, C., Cai, H., Cao, H., Henn, B., Jones, D., Kaye, J. S., Kent, A., Kerasidou, A., Mathias, R., Ossorio, P. N., Parker, M., Rotimi, C. N., Royal, C. D., Sandoval, K., Su, Y., Tian, Z., Tishkoff, S., Via, M., Wang, Y., Yang, H., Yang, L., Zhu, J., Bodmer, W., Bedoya, G., Cai, Z., Gao, Y., Chu, J., Peltonen, L., Garcia-Montero, A., Orfao, A., Dutil, J., Martinez-Cruzado, J. C., Mathias, R. A., Hennis, A., Watson, H., McKenzie, C., Qadri, F., LaRocque, R., Deng, X., Asogun, D., Folarin, O., Happi, C., Omoniwa, O., Stremlau, M., Tariyal, R., Jallow, M., Joof, F. S., Corrah, T., Rockett, K., Kwiatkowski, D., Kooner, J., Hien, T. T., Dunstan, S. J., ThuyHang, N., Fonnie, R., Garry, R., Kanneh, L., Moses, L., Schieffelin, J., Grant, D. S., Gallo, C., Poletti, G., Saleheen, D., Rasheed, A., Brooks, L. D., Felsenfeld, A. L., McEwen, J. E., Vaydylevich, Y., Duncanson, A., Dunn, M. & Schloss, J. A., Sep 30 2015, In : Nature. 526, 7571, p. 68-74 7 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    4862 Scopus citations
  • CHRNA5 Risk variant predicts delayed smoking cessation and earlier lung cancer diagnosis-a meta-analysis

    Chen, L. S., Hung, R. J., Baker, T., Horton, A., Culverhouse, R., Saccone, N., Cheng, I., Deng, B., Han, Y., Hansen, H. M., Horsman, J., Kim, C., Lutz, S., Rosenberger, A., Aben, K. K., Andrew, A. S., Breslau, N., Chang, S. C., Dieffenbach, A. K., Dienemann, H. & 36 others, Frederiksen, B., Han, J., Hatsukami, D. K., Johnson, E. O., Pande, M., Wrensch, M. R., McLaughlin, J., Skaug, V., Van Der Heijden, H. F., Wampfler, J., Wenzlaff, A., Woll, P., Zienolddiny, S., Bickeböller, H., Brenner, H., Duell, E. J., Haugen, A., Heinrich, J., Hokanson, J. E., Hunter, D. J., Kiemeney, L. A., Lazarus, P., Le Marchand, L., Liu, G., Mayordomo, J., Risch, A., Schwartz, A. G., Teare, D., Wu, X., Wiencke, J. K., Yang, P., Zhang, Z. F., Spitz, M. R., Kraft, P., Amos, C. I. & Bierut, L. J., May 1 2015, In : Journal of the National Cancer Institute. 107, 5, djv100.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    47 Scopus citations
  • Moving from capstones toward cornerstones: Successes and challenges in applying systems biology to identify mechanisms of autism spectrum disorders

    Kopp, N., Climer, S. & Dougherty, J. D., 2015, In : Frontiers in Genetics. 6, OCT, 301.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    9 Scopus citations
  • Toying with fate: Redirecting the differentiation of adrenocortical progenitor cells into gonadal-like tissue

    Röhrig, T., Pihlajoki, M., Ziegler, R., Cochran, R. S., Schrade, A., Schillebeeckx, M., Mitra, R. D., Heikinheimo, M. & Wilson, D. B., Jun 5 2015, In : Molecular and Cellular Endocrinology. 408, p. 165-177 13 p.

    Research output: Contribution to journalReview articlepeer-review

    12 Scopus citations
  • 2014

    A glimpse into the future - Personalized medicine for smoking cessation

    Bierut, L. J., Johnson, E. O. & Saccone, N. L., Jan 1 2014, In : Neuropharmacology. 76, PART B, p. 592-599 8 p.

    Research output: Contribution to journalReview articlepeer-review

    23 Scopus citations
  • Expanding the computational toolbox for mining cancer genomes

    Ding, L., Wendl, M. C., McMichael, J. F. & Raphael, B. J., Aug 2014, In : Nature Reviews Genetics. 15, 8, p. 556-570 15 p.

    Research output: Contribution to journalReview articlepeer-review

    126 Scopus citations
  • The awesome power of dikaryons for studying flagella and basal bodies in Chlamydomonas reinhardtii

    Dutcher, S. K., Feb 2014, In : Cytoskeleton. 71, 2, p. 79-94 16 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    21 Scopus citations
  • The Chlamydomonas genome project: A decade on

    Blaby, I. K., Blaby-Haas, C. E., Tourasse, N., Hom, E. F. Y., Lopez, D., Aksoy, M., Grossman, A., Umen, J., Dutcher, S., Porter, M., King, S., Witman, G. B., Stanke, M., Harris, E. H., Goodstein, D., Grimwood, J., Schmutz, J., Vallon, O., Merchant, S. S. & Prochnik, S., Oct 1 2014, In : Trends in Plant Science. 19, 10, p. 672-680 9 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    78 Scopus citations
  • 2013

    A blueprint for engineering cell fate: Current technologies to reprogram cell identity

    Morris, S. A. & Daley, G. Q., Jan 2013, In : Cell Research. 23, 1, p. 33-48 16 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    69 Scopus citations
  • Detection of structural DNA variation from next generation sequencing data: A review of informatic approaches

    Abel, H. J. & Duncavage, E. J., Dec 1 2013, In : Cancer Genetics. 206, 12, p. 432-440 9 p.

    Research output: Contribution to journalReview articlepeer-review

    76 Scopus citations
  • Genomic imprinting and parent-of-origin effects on complex traits

    Lawson, H. A., Cheverud, J. M. & Wolf, J. B., Sep 1 2013, In : Nature Reviews Genetics. 14, 9, p. 609-617 9 p.

    Research output: Contribution to journalReview articlepeer-review

    126 Scopus citations
  • LGI proteins in the nervous system

    Kegel, L., Aunin, E., Meijer, D. & Bermingham, J. R., 2013, In : ASN Neuro. 5, 3, p. 167-181 15 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    47 Scopus citations
  • Modeling the specificity of protein-DNA interactions

    Stormo, G. D., Jun 1 2013, In : Quantitative Biology. 1, 2, p. 115-130 16 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    85 Scopus citations
  • The cancer genome atlas pan-cancer analysis project

    Weinstein, J. N., Collisson, E. A., Mills, G. B., Shaw, K. R. M., Ozenberger, B. A., Ellrott, K., Sander, C., Stuart, J. M., Chang, K., Creighton, C. J., Davis, C., Donehower, L., Drummond, J., Wheeler, D., Ally, A., Balasundaram, M., Birol, I., Butterfield, Y. S. N., Chu, A., Chuah, E. & 316 others, Chun, H. J. E., Dhalla, N., Guin, R., Hirst, M., Hirst, C., Holt, R. A., Jones, S. J. M., Lee, D., Li, H. I., Marra, M. A., Mayo, M., Moore, R. A., Mungall, A. J., Robertson, A. G., Schein, J. E., Sipahimalani, P., Tam, A., Thiessen, N., Varhol, R. J., Beroukhim, R., Bhatt, A. S., Brooks, A. N., Cherniack, A. D., Freeman, S. S., Gabriel, S. B., Helman, E., Jung, J., Meyerson, M., Ojesina, A. I., Pedamallu, C. S., Saksena, G., Schumacher, S. E., Tabak, B., Zack, T., Lander, E. S., Bristow, C. A., Hadjipanayis, A., Haseley, P., Kucherlapati, R., Lee, S., Lee, E., Luquette, L. J., Mahadeshwar, H. S., Pantazi, A., Parfenov, M., Park, P. J., Protopopov, A., Ren, X., Santoso, N., Seidman, J., Seth, S., Song, X., Tang, J., Xi, R., Xu, A. W., Yang, L., Zeng, D., Auman, J. T., Balu, S., Buda, E., Fan, C., Hoadley, K. A., Jones, C. D., Meng, S., Mieczkowski, P. A., Parker, J. S., Perou, C. M., Roach, J., Shi, Y., Silva, G. O., Tan, D., Veluvolu, U., Waring, S., Wilkerson, M. D., Wu, J., Zhao, W., Bodenheimer, T., Hayes, D. N., Hoyle, A. P., Jeffreys, S. R., Mose, L. E., Simons, J. V., Soloway, M. G., Baylin, S. B., Berman, B. P., Bootwalla, M. S., Danilova, L., Herman, J. G., Hinoue, T., Laird, P. W., Rhie, S. K., Shen, H., Triche, T., Weisenberger, D. J., Carter, S. L., Cibulskis, K., Chin, L., Zhang, J., Sougnez, C., Wang, M., Getz, G., Dinh, H., Doddapaneni, H. V., Gibbs, R., Gunaratne, P., Han, Y., Kalra, D., Kovar, C., Lewis, L., Morgan, M., Morton, D., Muzny, D., Reid, J., Xi, L., Cho, J., Dicara, D., Frazer, S., Gehlenborg, N., Heiman, D. I., Kim, J., Lawrence, M. S., Lin, P., Liu, Y., Noble, M. S., Stojanov, P., Voet, D., Zhang, H., Zou, L., Stewart, C., Bernard, B., Bressler, R., Eakin, A., Iype, L., Knijnenburg, T., Kramer, R., Kreisberg, R., Leinonen, K., Lin, J., Liu, Y., Miller, M., Reynolds, S. M., Rovira, H., Shmulevich, I., Thorsson, V., Yang, D., Zhang, W., Amin, S., Wu, C. J., Wu, C. C., Akbani, R., Aldape, K., Baggerly, K. A., Broom, B., Casasent, T. D., Cleland, J., Dodda, D., Edgerton, M., Han, L., Herbrich, S. M., Ju, Z., Kim, H., Lerner, S., Li, J., Liang, H., Liu, W., Lorenzi, P. L., Lu, Y., Melott, J., Nguyen, L., Su, X., Verhaak, R., Wang, W., Wong, A., Yang, Y., Yao, J., Yao, R., Yoshihara, K., Yuan, Y., Yung, A. K., Zhang, N., Zheng, S., Ryan, M., Kane, D. W., Aksoy, B. A., Ciriello, G., Dresdner, G., Gao, J., Gross, B., Jacobsen, A., Kahles, A., Ladanyi, M., Lee, W., Lehmann, K. V., Miller, M. L., Ramirez, R., Rätsch, G., Reva, B., Schultz, N., Senbabaoglu, Y., Shen, R., Sinha, R., Sumer, S. O., Sun, Y., Taylor, B. S., Weinhold, N., Fei, S., Spellman, P., Benz, C., Carlin, D., Cline, M., Craft, B., Goldman, M., Haussler, D., Ma, S., Ng, S., Paull, E., Radenbaugh, A., Salama, S., Sokolov, A., Swatloski, T., Uzunangelov, V., Waltman, P., Yau, C., Zhu, J., Hamilton, S. R., Abbott, S., Abbott, R., Dees, N. D., Delehaunty, K., Ding, L., Dooling, D. J., Eldred, J. M., Fronick, C. C., Fulton, R., Fulton, L. L., Kalicki-Veizer, J., Kanchi, K. L., Kandoth, C., Koboldt, D. C., Larson, D. E., Ley, T., Lin, L., Lu, C., Magrini, V. J., Mardis, E. R., McLellan, M. D., McMichael, J. F., Miller, C., O'Laughlin, M., Pohl, C., Schmidt, H., Smith, S. M., Walker, J., Wallis, J. W., Wendl, M., Wilson, R. K., Wylie, T., Zhang, Q., Burton, R., Jensen, M. A., Kahn, A., Pihl, T., Pot, D., Wan, Y., Levine, D. A., Black, A. D., Bowen, J., Frick, J., Gastier-Foster, J. M., Harper, H. A., Helsel, C., Leraas, K. M., Lichtenberg, T. M., McAllister, C., Ramirez, N. C., Sharpe, S., Wise, L., Zmuda, E., Chanock, S. J., Davidsen, T., Demchok, J. A., Eley, G., Felau, I., Sheth, M., Sofia, H., Staudt, L., Tarnuzzer, R., Wang, Z., Yang, L., Zhang, J., Omberg, L., Margolin, A., Raphael, B. J., Vandin, F., Wu, H. T., Leiserson, M. D. M., Benz, S. C., Vaske, C. J., Noushmehr, H., Wolf, D., Veer, L. V. T., Anastassiou, D., Yang, T. H. O., Lopez-Bigas, N., Gonzalez-Perez, A., Tamborero, D., Xia, Z., Li, W., Cho, D. Y., Przytycka, T., Hamilton, M., McGuire, S., Nelander, S., Johansson, P., Jörnsten, R. & Kling, T., Oct 1 2013, In : Nature Genetics. 45, 10, p. 1113-1120 8 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2494 Scopus citations
  • 2011

    Longevity and stress in Caenorhabditis elegans

    Zhou, K. I., Pincus, Z. & Slack, F. J., Aug 2011, In : Aging. 3, 8, p. 733-753 21 p.

    Research output: Contribution to journalReview articlepeer-review

    76 Scopus citations
  • Regulation of ciliary motility: Conserved protein kinases and phosphatases are targeted and anchored in the ciliary axoneme

    Wirschell, M., Yamamoto, R., Alford, L., Gokhale, A., Gaillard, A. & Sale, W. S., Jun 15 2011, In : Archives of Biochemistry and Biophysics. 510, 2, p. 93-100 8 p.

    Research output: Contribution to journalReview articlepeer-review

    37 Scopus citations
  • 2010

    Determining the specificity of protein-DNA interactions

    Stormo, G. D. & Zhao, Y., Nov 1 2010, In : Nature Reviews Genetics. 11, 11, p. 751-760 10 p.

    Research output: Contribution to journalReview articlepeer-review

    187 Scopus citations
  • Developmental biomarkers of aging in Caenorhabditis elegans

    Pincus, Z. & Slack, F. J., May 2010, In : Developmental Dynamics. 239, 5, p. 1306-1314 9 p.

    Research output: Contribution to journalReview articlepeer-review

    31 Scopus citations
  • Interactions of dietary whole-grain intake with fasting glucose- and insulin-related genetic loci in individuals of European descent: A meta-analysis of 14 cohort studies

    Nettleton, J. A., McKeown, N. M., Kanoni, S., Lemaitre, R. N., Hivert, M. F., Ngwa, J., Van Rooij, F. J. A., Sonestedt, E., Wojczynski, M. K., Ye, Z., Tanaka, T., Garcia, M., Anderson, J. S., Follis, J. L., Djousse, L., Mukamal, K., Papoutsakis, C., Mozaffarian, D., Zillikens, M. C., Bandinelli, S. & 44 others, Bennett, A. J., Borecki, I. B., Feitosa, M. F., Ferrucci, L., Forouhi, N. G., Groves, C. J., Hallmans, G., Harris, T., Hofman, A., Houston, D. K., Hu, F. B., Johansson, I., Kritchevsky, S. B., Langenberg, C., Launer, L., Liu, Y., Loos, R. J., Nalls, M., Orho-Melander, M., Renstrom, F., Rice, K., Riserus, U., Rolandsson, O., Rotter, J. I., Saylor, G., Sijbrands, E. J. G., Sjogren, P., Smith, A., Steingrímsdóttir, L., Uitterlinden, A. G., Wareham, N. J., Prokopenko, I., Pankow, J. S., Van Duijn, C. M., Florez, J. C., Witteman, J. C. M., Dupuis, J., Dedoussis, G. V., Ordovas, J. M., Ingelsson, E., Cupples, L. A., Siscovick, D. S., Franks, P. W. & Meigs, J. B., Dec 2010, In : Diabetes care. 33, 12, p. 2684-2691 8 p.

    Research output: Contribution to journalReview articlepeer-review

    96 Scopus citations
  • Metabolic syndrome components in murine models

    Lawson, H. A. & Cheverud, J. M., Mar 2010, In : Endocrine, Metabolic and Immune Disorders - Drug Targets. 10, 1, p. 25-40 16 p.

    Research output: Contribution to journalReview articlepeer-review

    16 Scopus citations
  • Visualizing genomes: Techniques and challenges

    Nielsen, C. B., Cantor, M., Dubchak, I., Gordon, D. & Wang, T., Mar 2010, In : Nature Methods. 7, 3, p. S1-S11

    Research output: Contribution to journalReview articlepeer-review

    109 Scopus citations
  • Zinc in innate and adaptive tumor immunity

    John, E., Laskow, T. C., Buchser, W. J., Pitt, B. R., Basse, P. H., Butterfield, L. H., Kalinski, P. & Lotze, M. T., Nov 18 2010, In : Journal of Translational Medicine. 8, 118.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    80 Scopus citations
  • 2009

    An introduction to sequence similarity ("Homology") searching

    Stormo, G. D., Sep 17 2009, In : Current Protocols in Bioinformatics. SUPPL. 27, p. 3.1.1-3.1.7

    Research output: Contribution to journalReview articlepeer-review

    7 Scopus citations
  • A testable prognostic model of nicotine dependence

    Ramoni, R. B., Saccone, N. L., Hatsukami, D. K., Bierut, L. J. & Ramoni, M. F., Jan 1 2009, In : Journal of Neurogenetics. 23, 3, p. 283-292 10 p.

    Research output: Contribution to journalReview articlepeer-review

    11 Scopus citations
  • Unique aspects of transcriptional regulation in neurons - Nuances in NFκB and Sp1-related factors

    Mao, X. R., Moerman-Herzog, A. M., Chen, Y. & Barger, S. W., May 18 2009, In : Journal of Neuroinflammation. 6, 16.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    41 Scopus citations
  • 2008

    Statistical issues in the analysis of DNA Copy Number Variations.

    Wineinger, N. E., Kennedy, R. E., Erickson, S. W., Wojczynski, M. K., Bruder, C. E. & Tiwari, H. K., 2008, In : International journal of computational biology and drug design. 1, 4, p. 368-395 28 p.

    Research output: Contribution to journalReview articlepeer-review

    18 Scopus citations