Division of Pulmonary & Critical Care Medicine

2024

AI-Driven Deep Learning Techniques in Protein Structure Prediction

Chen, L., Li, Q., Nasif, K. F. A., Xie, Y., Deng, B., Niu, S., Pouriyeh, S., Dai, Z., Chen, J. & Xie, C. Y., Aug 2024, In: International journal of molecular sciences. 25, 15, 8426.

Research output: Contribution to journal › Review article › peer-review

Open Access

Artificial Intelligence in Otology and Neurotology

Rapoport, N., Pavelchek, C., Michelson, A. P. & Shew, M. A., Oct 2024, In: Otolaryngologic Clinics of North America. 57, 5, p. 791-802 12 p.

Research output: Contribution to journal › Review article › peer-review

Circadian Clock and Hypoxia

Sartor, F., Ferrero-Bordera, B., Haspel, J., Sperandio, M., Holloway, P. M. & Merrow, M., Mar 15 2024, In: Circulation research. 134, 6, p. 618-634 17 p.

Research output: Contribution to journal › Review article › peer-review

1 Scopus citations

Circadian immunity from bench to bedside: a practical guide

Mok, H., Ostendorf, E., Ganninger, A., Adler, A. J., Hazan, G. & Haspel, J. A., Feb 10 2024, In: Journal of Clinical Investigation. 134, 3, e175706.

Research output: Contribution to journal › Review article › peer-review

Open Access

2 Scopus citations

Circadian rhythms in solid organ transplantation

Patlin, B. H., Mok, H., Arra, M. & Haspel, J. A., May 2024, In: Journal of Heart and Lung Transplantation. 43, 5, p. 849-857 9 p.

Research output: Contribution to journal › Review article › peer-review

Extracorporeal Membrane Oxygenation for Respiratory Failure: A Narrative Review

Grotberg, J. C., Reynolds, D. & Kraft, B. D., Jul 2024, In: Journal of Clinical Medicine. 13, 13, 3795.

Research output: Contribution to journal › Review article › peer-review

Open Access

Hexamerization: explaining the original sin of IgG-mediated complement activation in acute lung injury

Kulkarni, H. S. & Milliken, J. T., Jun 3 2024, In: Journal of Clinical Investigation. 134, 11, e181137.

Research output: Contribution to journal › Review article › peer-review

Open Access

High-resolution CT phenotypes in pulmonary sarcoidosis: a multinational Delphi consensus study

Sarcoid Delphi Group, May 2024, In: The Lancet Respiratory Medicine. 12, 5, p. 409-418 10 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

9 Scopus citations

IL-33: Friend or foe in transplantation?

Hassan, G. F., Cohen, L. S. & Alexander-Brett, J., Aug 2024, In: Journal of Heart and Lung Transplantation. 43, 8, p. 1235-1240 6 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

Imaging of Lung Transplantation

Kim, S. J., Short, R. G., Beal, M. A., Byers, D. E., Javidan, C. & Raptis, D., Jun 2024, In: Clinics in Chest Medicine. 45, 2, p. 445-460 16 p.

Research output: Contribution to journal › Review article › peer-review

Is Zero Ventilator-Associated Pneumonia Achievable? Updated Practical Approaches to Ventilator-Associated Pneumonia Prevention

Guillamet, C. V. & Kollef, M. H., Mar 2024, In: Infectious disease clinics of North America. 38, 1, p. 65-86 22 p.

Research output: Contribution to journal › Review article › peer-review

2 Scopus citations

Local complement activation and modulation in mucosal immunity

Kulkarni, D. H., Starick, M., Aponte Alburquerque, R. & Kulkarni, H. S., Aug 2024, In: Mucosal Immunology. 17, 4, p. 739-751 13 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

Point-of-Care Echocardiography in the Difficult-to-Image Patient in the ICU: A Narrative Review

Grotberg, J. C., McDonald, R. K. & Co, I. N., Jan 11 2024, In: Critical Care Explorations. 6, 1, p. E1035

Research output: Contribution to journal › Review article › peer-review

Open Access

The role of cholesterol and its oxidation products in tuberculosis pathogenesis

Roth, A. T., Philips, J. A. & Chandra, P., 2024, In: Immunometabolism (United States). 6, 2, p. E00042

Research output: Contribution to journal › Review article › peer-review

Open Access

The Role of ICS-Containing Rescue Therapy Versus SABA Alone in Asthma Management Today

Krings, J. G. & Beasley, R., Apr 2024, In: Journal of Allergy and Clinical Immunology: In Practice. 12, 4, p. 870-879 10 p.

Research output: Contribution to journal › Review article › peer-review

1 Scopus citations

2023

Antibody-Mediated Rejection: Diagnosis and Treatment

Halverson, L. P. & Hachem, R. R., Mar 2023, In: Clinics in Chest Medicine. 44, 1, p. 95-103 9 p.

Research output: Contribution to journal › Review article › peer-review

2 Scopus citations

Diagnosis and Treatment of Fungal Infections in Lung Transplant Recipients

Escamilla, J. E., January, S. E. & Vazquez Guillamet, R., May 2023, In: Pathogens. 12, 5, 694.

Research output: Contribution to journal › Review article › peer-review

Open Access

2 Scopus citations

Ischemic priapism due to coagulopathy of severe COVID-19 infection

Grimberg, D. C., Tejwani, R., Allkanjari, A., Forrester, M. T., Kraft, B. D. & Kaye, D. R., Nov 2023, In: Journal of Clinical Urology. 16, 6, p. 691-695 5 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

2 Scopus citations

Management of severe acute respiratory distress syndrome: a primer

Grotberg, J. C., Reynolds, D. & Kraft, B. D., Dec 2023, In: Critical Care. 27, 1, 289.

Research output: Contribution to journal › Review article › peer-review

Open Access

15 Scopus citations

Prospective role of cefiderocol in the management of carbapenem-resistant Acinetobacter baumannii infections: Review of the evidence

Kollef, M., Dupont, H., Greenberg, D. E., Viale, P., Echols, R., Yamano, Y. & Nicolau, D. P., Aug 2023, In: International Journal of Antimicrobial Agents. 62, 2, 106882.

Research output: Contribution to journal › Review article › peer-review

Open Access

14 Scopus citations

Sepsis and acute respiratory failure in patients with cancer: how can we improve care and outcomes even further?

Lyons, P. G., McEvoy, C. A. & Hayes-Lattin, B., Oct 1 2023, In: Current Opinion in Critical Care. 29, 5, p. 472-483 12 p.

Research output: Contribution to journal › Review article › peer-review

2 Scopus citations

The Role of a Lung Vascular Endothelium Enriched Gene TMEM100

Pan, J., Liu, B. & Dai, Z., Mar 2023, In: Biomedicines. 11, 3, 937.

Research output: Contribution to journal › Review article › peer-review

Open Access

3 Scopus citations

Timing of Intubation in COVID-19: When It Is Too Early and When It Is Too Late

Grotberg, J. C. & Kraft, B. D., Feb 13 2023, In: Critical Care Explorations. 5, 2, p. E0863

Research output: Contribution to journal › Review article › peer-review

Open Access

6 Scopus citations

Tyvaso DPI: Drug-device characteristics and patient clinical considerations

McEvoy, C., Argula, R., Sahay, S., Shapiro, S., Eagan, C., Hickey, A. J., Smutney, C., Dillon, C., Winkler, T., Davis, B. N., Broderick, M. & Burger, C., Dec 2023, In: Pulmonary Pharmacology and Therapeutics. 83, 102266.

Research output: Contribution to journal › Review article › peer-review

Open Access

1 Scopus citations

2022

Adaptation as Both Necessity and Discipline Communication Skills Training in the COVID-19 Era

Schroeder, G. & Lyons, P. G., Mar 2022, In: ATS Scholar. 3, 1, p. 5-8 4 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

Centralized Organ Recovery and Reconditioning Centers

Bery, A., Ali, A., Cypel, M. & Kreisel, D., May 1 2022, In: Thoracic surgery clinics. 32, 2, p. 167-174 8 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

6 Scopus citations

Emerging roles of the complement system in host–pathogen interactions

Sahu, S. K., Kulkarni, D. H., Ozanturk, A. N., Ma, L. & Kulkarni, H. S., Apr 2022, In: Trends in Microbiology. 30, 4, p. 390-402 13 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

18 Scopus citations

Fatty Acid Metabolism in Endothelial Cell

Liu, B. & Dai, Z., Dec 2022, In: Genes. 13, 12, 2301.

Research output: Contribution to journal › Review article › peer-review

Open Access

12 Scopus citations

How to use new antibiotics in the therapy of serious multidrug resistant Gram-negative infections?

Windham, S. & Kollef, M. H., Dec 1 2022, In: Current Opinion in Infectious Diseases. 35, 6, p. 561-567 7 p.

Research output: Contribution to journal › Review article › peer-review

6 Scopus citations

How to use new antibiotics in the therapy of ventilator-associated pneumonia

Miwa, T., Lizza, B., Burnham, J., Honda, H. & Kollef, M., Apr 1 2022, In: Current Opinion in Infectious Diseases. 35, 2, p. 140-148 9 p.

Research output: Contribution to journal › Review article › peer-review

1 Scopus citations

Impact of motile ciliopathies on human development and clinical consequences in the newborn

Hyland, R. M. & Brody, S. L., Jan 1 2022, In: Cells. 11, 1, 125.

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

Infection control in the intensive care unit: expert consensus statements for SARS-CoV-2 using a Delphi method

Nasa, P., Azoulay, E., Chakrabarti, A., Divatia, J. V., Jain, R., Rodrigues, C., Rosenthal, V. D., Alhazzani, W., Arabi, Y. M., Bakker, J., Bassetti, M., De Waele, J., Dimopoulos, G., Du, B., Einav, S., Evans, L., Finfer, S., Guérin, C., Hammond, N. E. & Jaber, S. & 23 others, Kleinpell, R. M., Koh, Y., Kollef, M., Levy, M. M., Machado, F. R., Mancebo, J., Martin-Loeches, I., Mer, M., Niederman, M. S., Pelosi, P., Perner, A., Peter, J. V., Phua, J., Piquilloud, L., Pletz, M. W., Rhodes, A., Schultz, M. J., Singer, M., Timsit, J. F., Venkatesh, B., Vincent, J. L., Welte, T. & Myatra, S. N., Mar 2022, In: The Lancet Infectious Diseases. 22, 3, p. e74-e87

Research output: Contribution to journal › Review article › peer-review

Open Access

13 Scopus citations

It’s about the patients: Practical antibiotic stewardship in outpatient settings in the United States

Amin, A. N., Dellinger, E. P., Harnett, G., Kraft, B. D., LaPlante, K. L., LoVecchio, F., McKinnell, J. A., Tillotson, G. & Valentine, S., Jul 27 2022, In: Frontiers in Medicine. 9, 901980.

Research output: Contribution to journal › Review article › peer-review

Open Access

3 Scopus citations

Low Tidal Volume Ventilation for Emergency Department Patients: A Systematic Review and Meta-Analysis on Practice Patterns and Clinical Impact

De Monnin, K., Terian, E., Yaegar, L. H., Pappal, R. D., Mohr, N. M., Roberts, B. W., Kollef, M. H., Palmer, C. M., Ablordeppey, E. & Fuller, B. M., Jun 1 2022, In: Critical care medicine. 50, 6, p. 986-998 13 p.

Research output: Contribution to journal › Review article › peer-review

8 Scopus citations

Lung Allograft Rejection

Levine, D. J. & Hachem, R. R., May 1 2022, In: Thoracic surgery clinics. 32, 2, p. 221-229 9 p.

Research output: Contribution to journal › Review article › peer-review

6 Scopus citations

New antimicrobial treatment options for severe Gram-negative infections

Hetzler, L., Kollef, M. H., Yuenger, V., Micek, S. T. & Betthauser, K. D., Oct 1 2022, In: Current Opinion in Critical Care. 28, 5, p. 522-533 12 p.

Research output: Contribution to journal › Review article › peer-review

12 Scopus citations

Pressure-dependent persistent air leak in a patient with secondary spontaneous pneumothorax

Saha, B. K., Chong, W. H., Hu, K., Saha, S., Bonnier, A. & Chenna, P., Dec 2022, In: American Journal of the Medical Sciences. 364, 6, p. 782-788 7 p.

Research output: Contribution to journal › Review article › peer-review

1 Scopus citations

Prevalence of autoantibodies in pediatric patients with idiopathic pulmonary hemosiderosis: a scoping review of the literature in the period 1980–2021

Saha, B. K., Bonnier, A., Chenna, P. & Milman, N. T., Apr 2022, In: Clinical Rheumatology. 41, 4, p. 977-990 14 p.

Research output: Contribution to journal › Review article › peer-review

9 Scopus citations

Revisiting Mild Asthma: Current Knowledge and Future Needs

Mohan, A., Ludwig, A., Brehm, C., Lugogo, N. L., Sumino, K. & Hanania, N. A., Jan 2022, In: CHEST. 161, 1, p. 26-39 14 p.

Research output: Contribution to journal › Review article › peer-review

9 Scopus citations

Role of tertiary lymphoid organs in the regulation of immune responses in the periphery

Bery, A. I., Shepherd, H. M., Li, W., Krupnick, A. S., Gelman, A. E. & Kreisel, D., Jul 2022, In: Cellular and Molecular Life Sciences. 79, 7, 359.

Research output: Contribution to journal › Review article › peer-review

Open Access

29 Scopus citations

Specialized Donor Care Facility Model and Advances in Management of Thoracic Organ Donors

Bery, A., Marklin, G., Itoh, A., Kreisel, D., Takahashi, T., Meyers, B., Nava, R., Kozower, B., Shepherd, H., Patterson, G. A. & Puri, V., Jun 2022, In: Annals of Thoracic Surgery. 113, 6, p. 1778-1786 9 p.

Research output: Contribution to journal › Review article › peer-review

9 Scopus citations

The matricellular protein thrombospondin-1 in lung inflammation and injury

Tabary, M., Gheware, A., Peñaloza, H. F. & Lee, J. S., Sep 2022, In: American Journal of Physiology - Cell Physiology. 323, 3, p. C857-C865

Research output: Contribution to journal › Review article › peer-review

Open Access

8 Scopus citations

β-Lactam Therapeutic Drug Monitoring in Critically Ill Patients: Weighing the Challenges and Opportunities to Assess Clinical Value

Dilworth, T. J., Schulz, L. T., Micek, S. T., Kollef, M. H. & Rose, W. E., Jul 5 2022, In: Critical Care Explorations. 4, 7, p. E0726

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

2021

A Timely Call to Arms: COVID-19, the Circadian Clock, and Critical Care

Haspel, J., Kim, M., Zee, P., Schwarzmeier, T., Montagnese, S., Panda, S., Albani, A. & Merrow, M., Feb 2021, In: Journal of Biological Rhythms. 36, 1, p. 55-70 16 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

21 Scopus citations

ATS Core Curriculum 2021. Adult Pulmonary Medicine: Thoracic Oncology

Garrison, G. W., Cho, J. L., Deng, J. C., Camac, E., Oh, S., Sundar, K., Baptiste, J. V., Cheng, G. S., De Cardenas, J., Fitzgerald, C., Garfield, J., Ha, N. T., Holden, V. K., O'Corragain, O., Patel, S., Wayne, M. T., McSparron, J. I., Wang, T., Çoruh, B. & Hayes, M. M. & 2 others, Guzman, E. & Channick, C. L., Sep 2021, In: ATS Scholar. 2, 3, p. 468-483 16 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

2 Scopus citations

Bronchoscopy During Coronavirus Disease 2019 Pandemic: A Bronchoscopist’s Perspective

Saha, B. K., Chaudhary, R., Saha, S., Bonnier, A., Chong, W. H. & Chenna, P., Sep 1 2021, In: Critical Care Explorations. 3, 9, p. E0522

Research output: Contribution to journal › Review article › peer-review

Open Access

5 Scopus citations

Comparison of early warning scores for sepsis early identification and prediction in the general ward setting

Yu, S. C., Shivakumar, N., Betthauser, K., Gupta, A., Lai, A. M., Kollef, M. H., Payne, P. R. O. & Michelson, A. P., Jul 1 2021, In: JAMIA Open. 4, 3, ooab062.

Research output: Contribution to journal › Review article › peer-review

Open Access

11 Scopus citations

Editorial: COVID-19 immunology and organ transplantation

Bery, A. I., Kulkarni, H. S. & Kreisel, D., Apr 1 2021, In: Current opinion in organ transplantation. 26, 2, p. 258-265 8 p.

Research output: Contribution to journal › Review article › peer-review

Endothelial cells in the pathogenesis of pulmonary arterial hypertension

Evans, C. E., Cober, N. D., Dai, Z., Stewart, D. J. & Zhao, Y. Y., Sep 1 2021, In: European Respiratory Journal. 58, 3, 2003957.

Research output: Contribution to journal › Review article › peer-review

Open Access

133 Scopus citations

Equitable Implementation of Artificial Intelligence in Medical Imaging: What Can be Learned from Implementation Science?

Yousefi Nooraie, R., Lyons, P. G., Baumann, A. A. & Saboury, B., Oct 2021, In: PET Clinics. 16, 4, p. 643-653 11 p.

Research output: Contribution to journal › Review article › peer-review

8 Scopus citations

Division of Pulmonary & Critical Care Medicine

Research output

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