Division of Nephrology

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  • 2024

    CODEX and H&E Imaging: Cell Type Mapping, Analysis, and Visualization Pipeline

    Maragall, J. A., Lucarelli, N., Naglah, A., Border, S., Winfree, S., Laszik, Z., Eadon, M., El-Achkar, T. M., Jain, S. & Sarder, P., 2024, Medical Imaging 2024: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 129330W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12933).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Computational Integration of CODEX and Brightfield Histology for Cell Annotation using Deep Learning

    Lucarelli, N., Laszik, Z., Winfree, S., El-Achkar, T. M., Eadon, M., Jain, S. & Sarder, P., 2024, Medical Imaging 2024: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 129331F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12933).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2023

    Automated Reference Kidney Histomorphometry using a Panoptic Segmentation Neural Network Correlates to Patient Demographics and Creatinine

    Ginley, B., Lucarelli, N., Zee, J., Jain, S., Han, S. S., Rodrigues, L., Wong, M. L., Jen, K. Y. & Sarder, P., 2023, Medical Imaging 2023: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 124711R. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12471).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations
  • 2020

    Fully automated classification of glomerular lesions in lupus nephritis

    Ginley, B., Jen, K. Y., Rosenberg, A., Rossi, G. M., Jain, S. & Sarder, P., 2020, Medical Imaging 2020: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 113200Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11320).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • Neutrophil Extracellular Traps (NETs): An unexplored territory in renal pathobiology, a pilot computational study

    Santo, B. A., Segal, B. H., Tomaszewski, J. E., Mohammad, I., Worral, A. M., Jain, S., Visser, M. B. & Sarder, P., 2020, Medical Imaging 2020: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 1132012. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11320).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations
  • 2019

    Examining structural patterns and causality in diabetic nephropathy using inter-glomerular distance and Bayesian graphical models

    Majumdar, A., Jen, K. Y., Jain, S., Tomaszewski, J. E. & Sarder, P., 2019, Medical Imaging 2019: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 1095608. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10956).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
  • 2018

    Computational analysis of the structural progression of human glomeruli in diabetic nephropathy

    Ginley, B. G., Tomaszewski, J. E., Jen, K. Y., Fogo, A., Jain, S. & Sarder, P., 2018, Medical Imaging 2018: Digital Pathology. Gurcan, M. N. & Tomaszewski, J. E. (eds.). SPIE, 105810A. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10581).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Deep variational auto-encoders for unsupervised glomerular classification

    Lutnick, B., Yacoub, R., Jen, K. Y., Tomaszewski, J. E., Jain, S. & Sarder, P., 2018, Medical Imaging 2018: Digital Pathology. Gurcan, M. N. & Tomaszewski, J. E. (eds.). SPIE, 105810C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10581).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Examining structural changes in diabetic nephropathy using inter-nuclear distances in glomeruli: A comparison of variously automated methods

    Simon, O., Yacoub, R., Jain, S., Tomaszewski, J. E. & Sarder, P., 2018, Medical Imaging 2018: Digital Pathology. Gurcan, M. N. & Tomaszewski, J. E. (eds.). SPIE, 105810B. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10581).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations