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  • 2024

    Sequential early-life viral infections modulate the microbiota and adaptive immune responses to systemic and mucosal vaccination

    Li, Y., Molleston, J. M., Lovato, C., Wright, J., Erickson, I., Bui, D., Kim, A. H., Ingle, H., Aggarwal, S., Nolan, L. S., Hassan, A. O., Foster, L., Diamond, M. S. & Baldridge, M. T., Oct 2024, In: PLoS pathogens. 20, 10, e1012557.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • Short Bowel Syndrome: Transition of Pediatric Patients to Adult Gastroenterology Care

    Gregory, M. H., Saint-Cyr, M. & Rubin, D. C., Jan 2024, In: Gastro Hep Advances. 3, 2, p. 187-189 3 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Simplified methods for variance estimation in microbiome abundance count data analysis

    Shi, Y., Liu, L., Chen, J., Wylie, K. M., Wylie, T. N., Stout, M. J., Wang, C., Zhang, H., Shih, Y. C. T., Xu, X., Zhang, A., Park, S. H., Jiang, H. & Liu, L., 2024, In: Frontiers in Genetics. 15, 1458851.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • 5 Scopus citations
  • Open Access
    8 Scopus citations
  • The neonatal Fc receptor is a cellular receptor for human astrovirus

    Ingle, H., Molleston, J. M., Hall, P. D., Bui, D., Wang, L., Bhatt, K. D., Foster, L., Antia, A., Ding, S., Lee, S., Fremont, D. H. & Baldridge, M. T., Dec 2024, In: Nature microbiology. 9, 12, p. 3321-3331 11 p.

    Research output: Contribution to journalArticlepeer-review

    1 Scopus citations
  • The Post-transplant Lymphoproliferative Disorders - Metagenomic Shotgun Microbial Sequencing (PTLD-MSMS) Study Methods and Protocol

    Dharnidharka, V. R., Wylie, K. M., Wylie, T. N., Ruzinova, M. B., Goss, C. W., Storch, G. A., Mehta-Shah, N., Byers, D., Walther, L., Jaza, L., Gu, H., Agarwal, M., Green, M., Moore, E., Swerdlow, S. H., Silveira, F., Marks, L. J., Gratzinger, D., Bagg, A. & Law, S. C. & 1 others, Gandhi, M., Oct 28 2024, In: Transplantation Direct. 10, 11, p. e1723

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Trends in Mortality in People With HIV From 1999 through 2020: A Multicohort Collaboration

    Tusch, E., Ryom, L., Pelchen-Matthews, A., Mocroft, A., Elbirt, D., Oprea, C., Günthard, H. F., Staehelin, C., Zangerle, R., Suarez, I., Vehreschild, J. J., Wit, F., Menozzi, M., Monforte, A. D. A., Spagnuolo, V., Pradier, C., Carlander, C., Suanzes, P., Wasmuth, J. C. & Carr, A. & 1,222 others, Petoumenos, K., Borgans, F., Bonnet, F., De Wit, S., El-Sadr, W., Neesgaard, B., Jaschinski, N., Greenberg, L., Hosein, S. R., Gallant, J., Vannappagari, V., Young, L., Sabin, C., Lundgren, J., Peters, L., Reekie, J., El-Sadr, W., Calvo, G., Bonnet, F., Dabis, F., Kirk, O., Mocroft, A., Law, M., D'Arminio Monforte, A., Morfeldt, L., Pradier, C., Reiss, P., Weber, R., De Wit, S., Lind-Thomsen, A., Salbol Brandt, R., Hillebreght, M., Zaheri, S., Wit, F. W. N. M., Scherrer, A., Schöni-Affolter, F., Rickenbach, M., Tavelli, A., Fanti, I., Leleux, O., Mourali, J., Le Marec, F., Boerg, E., Thulin, E., Sundström, A., Bartsch, G., Thompsen, G., Necsoi, C., Delforge, M., Fontas, E., Caissotti, C., Dollet, K., Mateu, S., Torres, F., Petoumenos, K., Blance, A., Huang, R., Puhr, R., Gronborg Laut, K., Kristensen, D., Sabin, C. A., Phillips, A. N., Kamara, D. A., Smith, C. J., Mocroft, A., Hatleberg, C. I., Lind-Thomsen, A., Brandt, R. S., Raben, D., Matthews, C., Bojesen, A., Grevsen, A. L., Lundgren, J. D., Ryom, L., Powderly, B., Shortman, N., Moecklinghoff, C., Reilly, G., Franquet, X., Ryom, L., Mocroft, A., Kirk, O., Reiss, P., Smit, C., Ross, M., Fux, C. A., Morlat, P., Fontas, E., Kamara, D. A., Smith, C. J., Lundgren, J. D., Smith, C. J., Ryom, L., Hatleberg, C. I., Phillips, A. N., Weber, R., Morlat, P., Pradier, C., Reiss, P., Wit, F. W. N. M., Friis-Moller, N., Kowalska, J., Lundgren, J. D., Sabin, C. A., Ryom, L., Hatleberg, C. I., Law, M., Dabis, F., Bonnet, F., Reiss, P., Wit, F. W. N. M., Smith, C. J., Kamara, D. A., Bohlius, J., Bower, M., Fätkenheuer, G., Grulich, A., Lundgren, J. D., Sjol, A., Meidahl, P., Iversen, J. S., Reiss, C. P., Zaheri, S., Hillebregt, M., Wit, F. W. N. M., Prins, J. M., Kuijpers, T. W., Scherpbier, H. J., Van Der Meer, J. T. M., Wit, F. W. N. M., Godfried, M. H., Reiss, P., Van Der Poll, T., Nellen, F. J. B., Geerlings, S. E., Van Vugt, M., Pajkrt, D., Bos, J. C., Wiersinga, W. J., Van Der Valk, M., Goorhuis, A., Hovius, J. W., Van Eden, J., Henderiks, A., Van Hes, A. M. H., Mutschelknauss, M., Nobel, H. E., Pijnappel, F. J. J., Jurriaans, S., Back, N. K. T., Zaaijer, H. L., Berkhout, B., Cornelissen, M. T. E., Schinkel, C. J., Thomas, X. V., De Ruyter Ziekenhuis, A., Van Den Berge, M., Stegeman, A., Baas, S., Hage De Looff, L., Versteeg, D., Ziekenhuis, C., Pronk, M. J. H., Ammerlaan, H. S. M., De Munnik, E. S., Jansz, A. R., Tjhie, J., Wegdam, M. C. A., Deiman, B., Scharnhorst, V., Van Der Plas, A., Weijsenfeld, A. M., Van Der Ende, M. E., De Vries-Sluijs, T. E. M. S., Van Gorp, E. C. M., Schurink, C. A. M., Nouwen, J. L., Verbon, A., Rijnders, B. J. A., Bax, H. I., Van Der Feltz, M., Bassant, N., Van Beek, J. E. A., Vriesde, M., Van Zonneveld, L. M., De Oude-Lubbers, A., Van Den Berg-Cameron, H. J., Bruinsma-Broekman, F. B., De Groot, J., de Zeeuw De Man, M., Boucher, C. A. B., Koopmans, M. P. G., Van Kampen, J. J. A., Pas, S. D., Mc-Sophia, E., Driessen, G. J. A., Van Rossum, A. M. C., Van Der Knaap, L. C., Visser, E., Branger, J., Rijkeboer-Mes, A., Duijf-Van De Ven, C. J. H. M., Ziekenhuis, H., Schippers, E. F., Van Nieuwkoop, C., Van Ijperen, J. M., Geilings, J., Van Der Hut, G., Franck, P. F. H., Van Eeden, A., Brokking, W., Groot, M., Elsenburg, L. J. M., Damen, M., Kwa, I. S., Groeneveld, P. H. P., Bouwhuis, J. W., Van Den Berg, J. F., Van Hulzen, A. G. W., Van Der Bliek, G. L., Bor, P. C. J., Bloembergen, P., Wolfhagen, M. J. H. M., Ruijs, G. J. H. M., Kroon, F. P., De Boer, M. G. J., Bauer, M. P., Jolink, H., Vollaard, A. M., Dorama, W., Van Holten, N., Claas, E. C. J., Wessels, E., Den Hollander, J. G., Pogany, K., Roukens, A., Kastelijns, M., Smit, J. V., Smit, E., Struik-Kalkman, D., Tearno, C., Bezemer, M., Van Niekerk, T., Pontesilli, O., Lowe, S. H., Oude Lashof, A. M. L., Posthouwer, D., Ackens, R. P., Schippers, J., Vergoossen, R., Weijenberg-Maes, B., Van Loo, I. H. M., Havenith, T. R. A., Leyten, E. M. S., Gelinck, L. B. S., Van Hartingsveld, A., Meerkerk, C., Wildenbeest, G. S., Mutsaers, J. A. E. M., Jansen, C. L., Mulder, J. W., Vrouenraets, S. M. E., Lauw, F. N., Van Broekhuizen, M. C., Paap, H., Vlasblom, D. J., Smits, P. H. M., Zuiderzee, M. C., Weijer, S., El Moussaoui, R., Bosma, A. S., Van Vonderen, M. G. A., Van Houte, D. P. F., Kampschreur, L. M., Dijkstra, K., Faber, S., Weel, J., Kootstra, G. J., Delsing, C. E., Van Der Burg-Van De Plas, M., Heins, H., Lucas, E., Kortmann, W., Van Twillert, G., Cohen Stuart, J. W. T., Diederen, B. M. W., Pronk, D., Van Truijen-Oud, F. A., Van Der Reijden, W. A., Jansen, R., Brinkman, K., Van Den Berk, G. E. L., Blok, W. L., Frissen, P. H. J., Lettinga, K. D., Schouten, W. E. M., Veenstra, J., Brouwer, C. J., Geerders, G. F., Hoeksema, K., Kleene, M. J., Van Der Meché, D. M., Spelbrink, M., Sulman, H., Toonen, A. J. M., Wijnands, S., Damen, M., Kwa, D., Witte, E., Koopmans, P. P., Keuter, M., Van Der Ven, A. J. A. M., Ter Hofstede, H. J. M., Dofferhoff, A. S. M., Van Crevel, R., Albers, M., Bosch, M. E. W., Grintjes-Huisman, K. J. T., Zomer, B. J., Stelma, F. F., Rahamat-Langendoen, J., Burger, D., Richter, C., Gisolf, E. H., Hassing, R. J., Ter Beest, G., Van Bentum, P. H. M., Langebeek, N., Tiemessen, R., Swanink, C. M. A., Van Lelyveld, S. F. L., Soetekouw, R., Hulshoff, N., Van Der Prijt, L. M. M., Van Der Swaluw, J., Bermon, N., Van Der Reijden, W. A., Jansen, R., Herpers, B. L., Veenendaal, D., Verhagen, D. W. M., Van Wijk, M., Ziekenhuis, S. E., Van Kasteren, M. E. E., Brouwer, A. E., De Kruijf-Van De Wiel, B. A. F. M., Kuipers, M., Santegoets, R. M. W. J., Van Der Ven, B., Marcelis, J. H., Buiting, A. G. M., Kabel, P. J., Bierman, W. F. W., Scholvinck, H., Wilting, K. R., Stienstra, Y., De Groot-De Jonge, H., Van Der Meulen, P. A., De Weerd, D. A., Ludwig-Roukema, J., Niesters, H. G. M., Riezebos-Brilman, A., Van Leer-Buter, C. C., Knoester, M., Hoepelman, A. I. M., Mudrikova, T., Ellerbroek, P. M., Oosterheert, J. J., Arends, J. E., Barth, R. E., Wassenberg, M. W. M., Schadd, E. M., Van Elst-Laurijssen, D. H. M., Van Oers-Hazelzet, E. E. B., Vervoort, S., Van Berkel, M., Schuurman, R., Verduyn-Lunel, F., Wensing, A. M. J., Peters, E. J. G., Van Agtmael, M. A., Bomers, M., De Vocht, J., Heitmuller, M., Laan, L. M., Pettersson, A. M., Vandenbroucke-Grauls, C. M. J. E., Ang, C. W., Kinderziekenhuis, W., Geelen, S. P. M., Wolfs, T. F. W., Bont, L. J., Nauta, N., Reiss, P., Bezemer, D. O., Van Sighem, A. I., Smit, C., Wit, F. W. N. M., Boender, T. S., Zaheri, S., Hillebregt, M., De Jong, A., Bergsma, D., Hoekstra, P., De Lang, A., Grivell, S., Jansen, A., Rademaker, M. J., Raethke, M., Meijering, R., Schnörr, S., De Groot, L., Van Den Akker, M., Bakker, Y., Claessen, E., El Berkaoui, A., Koops, J., Kruijne, E., Lodewijk, C., Munjishvili, L., Peeck, B., Ree, C., Regtop, R., Ruijs, Y., Rutkens, T., Van De Sande, L., Schoorl, M., Timmerman, A., Tuijn, E., Veenenberg, L., Van Der Vliet, S., Wisse, A., Woudstra, T., Tuk, B., Bonnet, F., Dabis, F., Dupon, M., Gaborieau, V., Lacoste, D., Malvy, D., Mercié, P., Morlat, P., Neau, D., Pellegrin, J. L., Tchamgoué, S., Lazaro, E., Cazanave, C., Vandenhende, M., Vareil, M. O., Gérard, Y., Blanco, P., Bouchet, S., Breilh, D., Fleury, H., Pellegrin, I., Chêne, G., Thiébaut, R., Wittkop, L., Wittkop, L., Leleux, O., Lawson-Ayayi, S., Gimbert, A., Desjardin, S., Lacaze-Buzy, L., Petrov-Sanchez, V., Bonnet, F., Chêne, G., Dabis, F., Thiébaut, R., Wittkop, L., André, K., Bernard, N., Bonnet, F., Caubet, O., Caunegre, L., Cazanave, C., Chossat, I., Courtault, C., Dauchy, F. A., De Witte, S., Dondia, D., Dupon, M., Duffau, P., Dutronc, H., Farbos, S., Faure, I., Ferrand, H., Gaborieau, V., Gerard, Y., Greib, C., Hessamfar, M., Imbert, Y., Lacoste, D., Lataste, P., Lazaro, E., Malvy, D., Marie, J., Mechain, M., Mercié, P., Monlun, E., Morlat, P., Neau, D., Ochoa, A., Pellegrin, J. L., Pistone, T., Raymond, I., Receveur, M. C., Rispal, P., Sorin, L., Tchamgoué, S., Valette, C., Vandenhende, M. A., Vareil, M. O., Viallard, J. F., Wille, H., Wirth, G., Pellegrin, I., Blanco, P., Fleury, H., Lafon, M., Trimoulet, P., Bellecave, P., Tumiotto, C., Bouchet, S., Breilh, D., Haramburu, F., Miremeont-Salamé, G., Blaizeau, M. J., Decoin, M., Hannapier, C., Lenaud, E., Pougetoux, A., Delveaux, S., D'ivernois, C., Diarra, F., Uwamaliya-Nziyumvira, B., Leleux, O., Le Marec, F., Boerg, E., Lawson-Ayayi, S., Palmer, G., Conte, V., Sapparrart, V., Law, C. M., Petoumenos, K., Puhr, R., Huang, R., Moore, R., Edwards, S., Hoy, J., Watson, K., Roth, N., Lau, H., Bloch, M., Baker, D., Carr, A., Cooper, D., O'sullivan, M., Nolan, D., Guelfi, G., Calvo, C. G., Torres, F., Mateu, S., Domingo, P., Sambeat, M. A., Gatell, J., Del Cacho, E., Cadafalch, J., Fuster, M., Codina, C., Sirera, G., Vaqué, A., De Wit, S., Clumeck, N., Delforge, M., Necsoi, C., Clumeck, N., De Wit, S., Gennotte, A. F., Gerard, M., Kabeya, K., Konopnicki, D., Libois, A., Martin, C., Payen, M. C., Semaille, P., Van Laethem, Y., De Wit, S., Clumeck, N., Delforge, M., Necsoi, C., Clumeck, N., De Wit, S., Gennotte, A. F., Gerard, M., Kabeya, K., Konopnicki, D., Libois, A., Martin, C., Payen, M. C., Semaille, P., Van Laethem, Y., Neaton, C. J., Bartsch, G., El-Sadr, W. M., Krum, E., Thompson, G., Wentworth, D., Luskin-Hawk, R., Telzak, E., El-Sadr, W. M., Abrams, D. I., Cohn, D., Markowitz, N., Arduino, R., Mushatt, D., Friedland, G., Perez, G., Tedaldi, E., Fisher, E., Gordin, F., Crane, L. R., Sampson, J., Baxter, J., Gatell, J., Gazzard, B., Horban, A., Karpov, I., Losso, M., Pedersen, C., Ristola, M., Phillips, A., Reiss, P., Lundgren, J., Rockstroh, J., Rockstroh, J., Mocroft, A., Kirk, O., Kirk, O., Peters, L., Matthews, C., Fischer, A. H., Bojesen, A., Raben, D., Kristensen, D., Gronborg Laut, K., Larsen, J. F., Podlekareva, D., Mocroft, A., Phillips, A., Cozzi-Lepri, A., Shepherd, L., Schultze, A., Amele, S., Losso, M., Kundro, M., Schmied, B., der Stadt Wien, P. Z., Zangerle, R., Karpov, I., Vassilenko, A., Mitsura, V. M., Paduto, D., Clumeck, N., De Wit, S., Delforge, M., Florence, E., Vandekerckhove, L., Hadziosmanovic, V., Begovac, J., Machala, L., Jilich, D., Sedlacek, D., Kronborg, G., Benfield, T., Gerstoft, J., Katzenstein, T., Moller, N. F., Pedersen, C., Ostergaard, L., Wiese, L., Nielsen, L. N., Zilmer, K., Smidt, J., Siseklinik, N., Ristola, M., Aho, I., Viard, J. P., Pradier, C., Fontas, E., Duvivier, C., Rockstroh, J., Schmidt, R., Degen, O., Stellbrink, H. J., Stefan, C., Goethe, J. W., Bogner, J., Fätkenheuer, G., Chkhartishvili, N., Gargalianos, P., Xylomenos, G., Armenis, K., Sambatakou, H., Szlávik, J., Gottfredsson, M., Mulcahy, F., Yust, I., Turner, D., Burke, M., Shahar, E., Hassoun, G., Elinav, H., Haouzi, M., Elbirt, D., Sthoeger, Z. M., Esposito, R., Mazeu, I., Mussini, C., Mazzotta, F., Gabbuti, A., Annunziata, O. S. M., Vullo, V., Lichtner, M., Zaccarelli, M., Antinori, A., Acinapura, R., Plazzi, M., Lazzarin, A., Castagna, A., Gianotti, N., Galli, M., Ridolfo, A., Rozentale, B., Uzdaviniene, V., Matulionyte, R., Staub, T., Hemmer, R., Reiss, P., Ormaasen, V., Maeland, A., Bruun, J., Knysz, B., Gasiorowski, J., Inglot, M., Horban, A., Bakowska, E., Flisiak, R., Grzeszczuk, A., Parczewski, M., Maciejewska, K., Aksak-Was, B., Beniowski, M., Mularska, E., Smiatacz, T., Gensing, M., Jablonowska, E., Malolepsza, E., Wojcik, K., Mozer-Lisewska, I., Caldeira, L., Mansinho, K., Maltez, F., Radoi, R., Oprea, C., Panteleev, A., Panteleev, O., Yakovlev, A., Trofimora, T., Khromova, I., Kuzovatova, E., Blokhina, I. N., Novogrod, N., Borodulina, E., Vdoushkina, E., Jevtovic, D., Tomazic, J., Gatell, J. M., Miró, J. M., Moreno, S., Rodriguez, J. M., Clotet, B., Jou, A., Paredes, R., Tural, C., Puig, J., Bravo, I., Domingo, P., Gutierrez, M., Mateo, G., Sambeat, M. A., Laporte, J. M., Carlander, C., Sonnerborg, A., Brännström, I., Flamholc, L., Scherrer, A., Weber, R., Cavassini, M., Calmy, A., Furrer, H., Battegay, M., Schmid, P., Kuznetsova, A., Kyselyova, G., Sluzhynska, M., Gazzard, B., Johnson, A. M., Simons, E., Edwards, S., Phillips, A., Johnson, M. A., Mocroft, A., Orkin, C., Weber, J., Scullard, G., Clarke, A., Leen, C., Morfeldt, C. L., Thulin, G., Sundström, A., Åkerlund, B., Koppel, K., Karlsson, A., Flamholc, L., Håkangård, C., Antinori, A., Castagna, A., Castelli, F., Cauda, R., Di Perri, G., Galli, M., Iardino, R., Ippolito, G., Marchetti, G. C., Perno, C. F., Von Schloesser, F., Viale, P., Antinori, A., Castagna, A., Ceccherini-Silberstein, F., Cozzi-Lepri, A., Girardi, E., Lo Caputo, S., Mussini, C., Puoti, M., Andreoni, M., Ammassari, A., Antinori, A., Balotta, C., Bandera, A., Bonfanti, P., Bonora, S., Borderi, M., Calcagno, A., Calza, L., Capobianchi, M. R., Castagna, A., Ceccherini-Silberstein, F., Cingolani, A., Cinque, P., Cozzi-Lepri, A., De Luca, A., Di Biagio, A., Girardi, E., Gianotti, N., Gori, A., Guaraldi, G., Lapadula, G., Lichtner, M., Lo Caputo, S., Madeddu, G., Maggiolo, F., Marchetti, G., Marcotullio, S., Monno, L., Mussini, C., Nozza, S., Puoti, M., Quiros Roldan, E., Rossotti, R., Rusconi, S., Santoro, M. M., Saracino, A., Zaccarelli, M., Cozzi-Lepri, A., Fanti, I., Galli, L., Lorenzini, P., Rodano, A., Shanyinde, M., Tavelli, A., Carletti, F., Carrara, S., Di Caro, A., Graziano, S., Petrone, F., Prota, G., Quartu, S., Truffa, S., Giacometti, A., Costantini, A., Barocci, V., Angarano, G., Monno, L., Santoro, C., Maggiolo, F., Suardi, C., Viale, P., Donati, V., Verucchi, G., Castelli, F., Minardi, C., Quiros Roldan, E., Quirino, T., Abeli, C., Manconi, P. E., Piano, P., Cacopardo, B., Celesia, B., Vecchiet, J., Falasca, K., Pan, A., Lorenzotti, S., Sighinolfi, L., Segala, D., Mazzotta, F., Vichi, F., Cassola, G., Viscoli, C., Alessandrini, A., Bobbio, N., Mazzarello, G., Mastroianni, C., Belvisi, V., Bonfanti, P., Caramma, I., Chiodera, A., Milini, P., Galli, M., Lazzarin, A., Rizzardini, G., Puoti, M., Castagna, A., Marchetti, G., Moioli, M. C., Piolini, R., Ridolfo, A. L., Salpietro, S., Tincati, C., Mussini, C., Puzzolante, C., Gori, A., Lapadula, G., Abrescia, N., Chirianni, A., Borgia, G., Orlando, R., Bonadies, G., Di Martino, F., Gentile, I., Maddaloni, L., Cattelan, A. M., Marinello, S., Cascio, A., Colomba, C., Baldelli, F., Schiaroli, E., Parruti, G., Sozio, F., Magnani, G., Ursitti, M. A., Andreoni, M., Antinori, A., Cauda, R., Cristaudo, A., Vullo, V., Acinapura, R., Baldin, G., Capozzi, M., Cicalini, S., Cingolani, A., Fontanelli Sulekova, L., Iaiani, G., Latini, A., Mastrorosa, I., Plazzi, M. M., Savinelli, S., Vergori, A., Cecchetto, M., Viviani, F., Madeddu, G., Bagella, P., De Luca, A., Rossetti, B., Franco, A., Fontana Del Vecchio, R., Francisci, D., Di Giuli, C., Caramello, P., Di Perri, G., Bonora, S., Orofino, G. C., Sciandra, M., Bassetti, M., Londero, A., Pellizzer, G., Manfrin, V., Starnini, G., Ialungo, A., Central, C., Fontas, E., Dollet, K., Caissotti, C., Dellamonica, P., Bernard, E., Courjon, J., Cua, E., De Salvador-Guillouet, F., Durant, J., Etienne, C., Ferrando, S., Mondain-Miton, V., Naqvi, A., Perbost, I., Pillet, S., Prouvost-Keller, B., Pugliese, P., Rio, V., Risso, K., Roger, P. M., Aubert, V., Battegay, M., Bernasconi, E., Böni, J., Braun, D. L., Bucher, H. C., Calmy, A., Cavassini, M., Ciuffi, A., Dollenmaier, G., Egger, M., Elzi, L., Fehr, J., Fellay, J., Furrer, H., Fux, C. A., Günthard, H. F., Haerry, D., Hasse, B., Hirsch, H. H., Hoffmann, M., Hösli, I., Kahlert, C., Kaiser, L., Keiser, O., Klimkait, T., Kouyos, R. D., Kovari, H., Ledergerber, B., Martinetti, G., Martinez De Tejada, B., Marzolini, C., Metzner, K. J., Müller, N., Nicca, D., Pantaleo, G., Paioni, P., Rauch, A., Rudin, C., Scherrer, A. U., Schmid, P., Speck, R., Stöckle, M., Tarr, P., Trkola, A., Vernazza, P., Wandeler, G., Weber, R., Yerly, S., Wit, F., Valk, M. V., Hillebregt, M., Petoumenos, K., Law, M., Hutchinson, J., Rupasinghe, D., Min Han, W., Zangerle, R., Appoyer, H., Vera, J., Clarke, A., Broster, B., Barbour, L., Carney, D., Greenland, L., Coughlan, R., Saint-Pierre, C. H. U., De Wit, S., Delforge, M., Begovac, J., Wandeler, G., Stephan, C., Bucht, M., Chkhartishvili, N., Chokoshvili, O., Rodano, A., Tavelli, A., Fanti, I., Mussini, C., Borghi, V., Pradier, C., Fontas, E., Dollet, K., Caissotti, C., Casabona, J., Miro, J. M., Smith, C., Lampe, F., Johnson, M., Burns, F., Chaloner, C., Castagna, A., Spagnuolo, V., Muccini, C., Nozza, S., Lolatto, R., Sönnerborg, A., Carlander, C., Nowak, P., Vesterbacka, J., Mattsson, L., Carrick, D., Stigsäter, K., Günthard, H., Kusejko, K., Ledergerber, B., Bucher, H., Wasmuth, J. C., Rockstroh, J., Vehreschild, J. J., Fätkenheuer, G., Schulze, N., Franke, B., Ryom, L., Law, M., Rooney, J., Mcnicholl, I., Vannappagari, V., Garges, H., Petoumenos, K., Wandeler, G., Zangerle, R., Smith, C., De Wit, S., Lundgren, J., Günthard, H., Young, L., Campo, R., Lundgren, J., Günthard, H., Kowalska, J., Raben, D., Ryom, L., Rockstroh, J., Peters, L., Kirk, O., Podlekareva, D., Volny-Anne, A., Dedes, N., Williams, E. D., Chkhartishvili, N., Zangerle, R., Petoumenos, K., Wit, F., Necsoi, C., Wandeler, G., Stephan, C., Pradier, C., Mussini, C., Bruguera, A., Bucher, H., Sönnerborg, A., Vehreschild, J. J., Wasmuth, J. C., Smith, C., Castagna, A., Vera, J., Rooney, J., Mcnicholl, I., Vannappagari, V., Garges, H., Begovac, J., Young, L., Campo Alain Volny-Anne, R., Dedes, N., Mendão, L., Larsen, J. F., Peters, L., Jaschinski, N., Timiryasova, A., Neesgaard, B., Fursa, O., Ryom, L., Jakobsen, M. L., Kraef, C., Gardizi, M., Raben, D., Andersen, K., Ramesh Kumar, L., Elsing, T. W., Shahi, S., Valdenmaiier, O., Reekie, J., Greenberg, L., Bansi-Matharu, L., Pelchen-Matthews, A., Petoumenos, K., Byonanebye, D., Tusch, E., Bannister, W. & Roen, A., Nov 15 2024, In: Clinical Infectious Diseases. 79, 5, p. 1242-1257 16 p.

    Research output: Contribution to journalArticlepeer-review

    7 Scopus citations
  • Utilization of older deceased donors for pediatric liver transplant may negatively impact long-term survival

    Kulkarni, S. S., Vachharajani, N. A., Hill, A. L., Kiani, A. Z., Stoll, J. M., Nadler, M. L., Chapman, W. C., Doyle, M. M. & Khan, A. S., Apr 2024, In: Journal of pediatric gastroenterology and nutrition. 78, 4, p. 898-908 11 p.

    Research output: Contribution to journalArticlepeer-review

  • Variants in autophagy genes MTMR12 and FAM134A are putative modifiers of the hepatic phenotype in α1-antitrypsin deficiency

    Tafaleng, E. N., Li, J., Wang, Y., Hidvegi, T., Soto-Gutierrez, A., Locke, A. E., Nicholas, T. J., Wang, Y. C., Pak, S., Cho, M. H., Silverman, E. K., Silverman, G. A., Jin, S. C., Fox, I. J. & Perlmutter, D. H., Oct 1 2024, In: Hepatology. 80, 4, p. 859-871 13 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Worse fibro-inflammatory activity on diagnostic liver biopsy adversely impacts biochemical remission in autoimmune hepatitis

    Khonde, P., Choudhury, S., Spies, N. C., Naz, N., Stoll, J., Fleckenstein, J., He, M., Ballentine, S. & Kulkarni, S., Oct 2024, In: Clinics and Research in Hepatology and Gastroenterology. 48, 8, 102442.

    Research output: Contribution to journalArticlepeer-review

  • 2023

    A Broad Characterization of Glycogen Storage Disease IV Patients: A Clinical, Genetic, and Histopathological Study

    Wilke, M. V. M. B., de Oliveira, B. M., Starosta, R. T., Shinawi, M., Lu, L., He, M., Ma, Y., Stoll, J., de Souza, C. F. M., de Siqueira, A. C. M., Vieira, S. M. G., Cerski, C. T., Refosco, L. F. & Schwartz, I. V. D., Feb 2023, In: Biomedicines. 11, 2, 363.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    2 Scopus citations
  • Adult Primary Sclerosing Cholangitis (PSC) subjects have worse biliary disease at diagnosis compared to pediatric PSC subjects

    Kulkarni, S., Bhimaniya, S., Chi, L., Tica, S., Alghamdi, S., Stoll, J., Caudill, K. & Fleckenstein, J., May 2023, In: Clinical Imaging. 97, p. 7-13 7 p.

    Research output: Contribution to journalArticlepeer-review

  • A foundational approach to culture and analyze malnourished organoids

    Perlman, M., Senger, S., Verma, S., Carey, J. & Faherty, C. S., 2023, In: Gut microbes. 15, 2, 2248713.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    5 Scopus citations
  • Bone health in children with recurrent and chronic pancreatitis: A multi-center cross sectional analysis

    Consortium for the Study of Chronic Pancreatitis, Diabetes, and Pancreatic Cancer (CPDPC), Abu-El-Haija, M., Hornung, L., Ellery, K., Fishman, D. S., Gonska, T. Y., Gariepy, C., Lowe, M., Larson Ode, K., Maqbool, A., Mascarenhas, M., Morinville, V. D., Ooi, C. Y., Perito, E. R., Schwarzenberg, S. J., Sellers, Z. M., Zemel, B. S., Yuan, Y., Wang, F. & Uc, A. & 1 others, Kalkwarf, H. J., Nov 2023, In: Pancreatology. 23, 7, p. 755-760 6 p.

    Research output: Contribution to journalArticlepeer-review

    1 Scopus citations
  • Characterization of novel PNLIP variants in congenital pancreatic lipase deficiency

    Lin, J., Matiwala, N., Curry, G. E., Wilhelm, S. J., Cassidy, B. M., Lowe, M. E. & Xiao, X., Dec 2023, In: Pancreatology. 23, 8, p. 1036-1040 5 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    2 Scopus citations
  • Characterizing the Pain Experience of Children with Acute Gastroenteritis Based on Identified Pathogens

    Ma, K., Ali, S., Xie, J., Maki, C., Lee, B., Chui, L., Pang, X. L., Zhuo, R., Parsons, B., Vanderkooi, O., Poonai, N., Macdonald, S. E., Tarr, P. & Freedman, S. B., Feb 1 2023, In: Journal of pediatric gastroenterology and nutrition. 76, 2, p. 160-165 6 p.

    Research output: Contribution to journalArticlepeer-review

  • Comparative Effectiveness of Anti-TNF in Combination With Low-Dose Methotrexate vs Anti-TNF Monotherapy in Pediatric Crohn's Disease: A Pragmatic Randomized Trial

    Kappelman, M. D., Wohl, D. A., Herfarth, H. H., Firestine, A. M., Adler, J., Ammoury, R. F., Aronow, J. E., Bass, D. M., Bass, J. A., Benkov, K., Tobi, C. B., Boccieri, M. E., Boyle, B. M., Brinkman, W. B., Cabera, J. M., Chun, K., Colletti, R. B., Dodds, C. M., Dorsey, J. M. & Ebach, D. R. & 39 others, Entrena, E., Forrest, C. B., Galanko, J. A., Grunow, J. E., Gulati, A. S., Ivanova, A., Jester, T. W., Kaplan, J. L., Kugathasan, S., Kusek, M. E., Leibowitz, I. H., Linville, T. M., Lipstein, E. A., Margolis, P. A., Minar, P., Molle-Rios, Z., Moses, J., Olano, K. K., Osaba, L., Palomo, P. J., Pappa, H., Park, K. T., Pashankar, D. S., Pitch, L., Robinson, M., Samson, C. M., Sandberg, K. C., Schuchard, J. R., Seid, M., Shelly, K. A., Steiner, S. J., Strople, J. A., Sullivan, J. S., Tung, J., Wali, P., Zikry, M., Weinberger, M., Saeed, S. A. & Bousvaros, A., Jul 2023, In: Gastroenterology. 165, 1, p. 149-161.e7

    Research output: Contribution to journalArticlepeer-review

    Open Access
    28 Scopus citations
  • Gut microbiome composition may be an indicator of preclinical Alzheimer’s disease

    Ferreiro, A. L., Choi, J. H., Ryou, J., Newcomer, E. P., Thompson, R., Bollinger, R. M., Hall-Moore, C., Ndao, I. M., Sax, L., Benzinger, T. L. S., Stark, S. L., Holtzman, D. M., Fagan, A. M., Schindler, S. E., Cruchaga, C., Butt, O. H., Morris, J. C., Tarr, P. I., Ances, B. M. & Dantas, G., 2023, In: Science translational medicine. 15, 700, eabo2984.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    156 Scopus citations
  • Gut microbiota induces weight gain and inflammation in the gut and adipose tissue independent of manipulations in diet, genetics, and immune development

    Kulkarni, D. H., Rusconi, B., Floyd, A. N., Joyce, E. L., Talati, K. B., Kousik, H., Alleyne, D., Harris, D. L., Garnica, L., McDonough, R., Bidani, S. S., Kulkarni, H. S., Newberry, E. P., McDonald, K. G. & Newberry, R. D., 2023, In: Gut microbes. 15, 2, 2284240.

    Research output: Contribution to journalArticlepeer-review

    7 Scopus citations
  • Gut pathogen colonization precedes bloodstream infection in the neonatal intensive care unit

    Schwartz, D. J., Shalon, N., Wardenburg, K., DeVeaux, A., Wallace, M. A., Hall-Moore, C., Ndao, I. M., Sullivan, J. E., Radmacher, P., Escobedo, M., Burnham, C. A. D., Warner, B. B., Tarr, P. I. & Dantas, G., 2023, In: Science translational medicine. 15, 694, eadg5562.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    32 Scopus citations
  • Heterogeneous liver on research ultrasound identifies children with cystic fibrosis at high risk of advanced liver disease

    Siegel, M. J., Leung, D. H., Molleston, J. P., Ye, W., Paranjape, S. M., Freeman, A. J., Palermo, J. J., Stoll, J., Masand, P., Karmazyn, B., Harned, R., Ling, S. C., Navarro, O. M., Karnsakul, W., Alazraki, A., Schwarzenberg, S. J., Towbin, A. J., Alonso, E. M., Nicholas, J. L. & Green, N. & 3 others, Otto, R. K., Magee, J. C. & Narkewicz, M. R., Jul 2023, In: Journal of Cystic Fibrosis. 22, 4, p. 745-755 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    7 Scopus citations
  • Hyperhydration to Improve Kidney Outcomes in Children with Shiga Toxin-Producing E. coli Infection: a multinational embedded cluster crossover randomized trial (the HIKO STEC trial)

    On behalf of the Hyperhydration to Improve Kidney Outcomes in children with Shiga Toxin-producing E. Coli infection (HIKO-STEC) Study Team, Freedman, S. B., Schnadower, D., Estes, M., Casper, T. C., Goldstein, S. L., Grisaru, S., Pavia, A. T., Wilfond, B. S., Metheney, M., Kimball, K. & Tarr, P. I., Dec 2023, In: Trials. 24, 1, 359.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • IBD Camp Oasis: A look at Participants' Social-Emotional Well-Being and Protective Factors During Camp and Beyond

    Singh, N., Steiner, S. J., Fauth, R., Moosmann, D., Arnold, J., Elkadri, A., Marinoni, D., Molloy, L., Johnson Rescola, B., Tung, J. & Utterson, E. C., Jul 1 2023, In: Crohn's and Colitis 360. 5, 3, otad042.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • Infants exposed in utero to Hurricane Maria have gut microbiomes with reduced diversity and altered metabolic capacity

    Zhang, A., de Ángel Solá, D., Flores, M. A., Cao, L., Wang, L., Kim, J. G., Tarr, P. I., Warner, B. B., Matos, N. R. & Wang, L., Oct 2023, In: mSphere. 8, 5

    Research output: Contribution to journalArticlepeer-review

    Open Access
    2 Scopus citations
  • Long-term follow-up and liver outcomes in children with cystic fibrosis and nodular liver on ultrasound in a multi-center study

    CFLD Research Network, Leung, D. H., Ye, W., Schwarzenberg, S. J., Freeman, A. J., Palermo, J. J., Weymann, A., Alonso, E. M., Karnsakul, W. W., Murray, K. F., Stoll, J. M., Huang, S., Karmazyn, B., Masand, P., Magee, J. C., Alazraki, A. L., Towbin, A. J., Nicholas, J. L., Green, N. & Otto, R. K. & 6 others, Siegel, M. J., Ling, S. C., Navarro, O. M., Harned, R. K., Narkewicz, M. R. & Molleston, J. P., Mar 2023, In: Journal of Cystic Fibrosis. 22, 2, p. 248-255 8 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    12 Scopus citations
  • Metagenomic Analysis of DNA Viruses with Targeted Sequence Capture of Canine Lobular Orbital Adenomas and Normal Conjunctiva

    Schaefer, E. A. F., Chu, S., Wylie, K. M., Wylie, T. N., Griffith, O. L., Pearce, J. W., Johnson, G. C., Bryan, J. N. & Flesner, B. K., May 2023, In: Microorganisms. 11, 5, 1163.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • Pathogen and Antibody Identification in Children with Encephalitis in Myanmar

    Galardi, M. M., Sowa, G. M., Crockett, C. D., Rudock, R., Smith, A. E., Shwe, E. E., San, T., Linn, K., Aye, A. M. M., Ramachandran, P. S., Zia, M., Wapniarski, A. E., Hawes, I. A., Hlaing, C. S., Kyu, E. H., Thair, C., Mar, Y. Y., Nway, N., Storch, G. A. & Wylie, K. M. & 4 others, Wylie, T. N., Dalmau, J., Wilson, M. R. & Mar, S. S., Mar 2023, In: Annals of neurology. 93, 3, p. 615-628 14 p.

    Research output: Contribution to journalArticlepeer-review

    11 Scopus citations
  • Pediatric Drug-Associated Pancreatitis Reveals Concomitant Risk Factors and Poor Reliability of Causality Scoring: Report From INSPPIRE

    Morinville, V. D., Husain, S. Z., Wang, F., Cress, G. A., Abu-El-Haija, M., Chugh, A., Downs, E., Ellery, K., Fishman, D. S., Freeman, A. J., Gariepy, C. E., Giefer, M., Gonska, T., Liu, Q., Maqbool, A., Mark, J., Mcferron, B. A., Mehta, M., Nathan, J. D. & Ng, K. & 12 others, Ooi, C. Y., Perito, E., Ruan, W., Schwarzenberg, S. J., Sellers, Z. M., Serrano, J., Troendle, D. M., Wilschanski, M., Zheng, Y., Yuan, Y., Lowe, M. & Uc, A., Oct 1 2023, In: Journal of pediatric gastroenterology and nutrition. 77, 4, p. 540-546 7 p.

    Research output: Contribution to journalArticlepeer-review

    1 Scopus citations
  • Preclinical mouse model of a misfolded PNLIP variant develops chronic pancreatitis

    Zhu, G., Wilhelm, S. J., George, L. G., Cassidy, B. M., Zino, S., Luke, C. J., Hanna, M., Stone, S., Phan, N., Matiwala, N., Ballentine, S. J., Lowe, M. & Xiao, X., Jul 1 2023, In: Gut. 72, 7, p. 1340-1354 15 p.

    Research output: Contribution to journalArticlepeer-review

    13 Scopus citations
  • Safety and Immunogenicity of Live Viral Vaccines in a Multicenter Cohort of Pediatric Transplant Recipients

    Feldman, A. G., Beaty, B. L., Ferrolino, J. A., Maron, G., Weidner, H. K., Ali, S. A., Bitterfeld, L., Boulware, M. A., Campbell, K. M., Carr, E., Chapman, S., Chang, Y. C., Cunningham, R., Dallas, R. H., Dantuluri, K. L., Domenick, B. N., Ebel, N. H., Elisofon, S., Fawaz, R. & Foca, M. & 39 others, Gans, H. A., Gopalareddy, V. V., Gu, C., Gupta, N. A., Harmann, K., Hollenbeck, J., Huppler, A. R., Jaramillo, C., Kasi, N., Kerkar, N., Lerret, S., Lobritto, S. J., Lopez, M. J., Marini, E., Mavis, A., Mehra, S., Moats, L., Mohandas, S., Munoz, F. M., Mysore, K. R., Onsan, C., Ovchinsky, N., Perkins, K., Postma, S., Pratscher, L., Rand, E. B., Rowe, R. K., Schultz, D., Sear, K., Sell, M. L., Sharma, T., Stoll, J., Vang, M., Villarin, D., Weaver, C., Wood, P., Woodford-Berry, O., Yanni, G. & Danziger-Isakov, L. A., Oct 12 2023, In: JAMA Network Open. 6, 10, p. E2337602

    Research output: Contribution to journalArticlepeer-review

    Open Access
    23 Scopus citations
  • Sclerosing Epithelioid Fibrosarcoma of the Liver in a Pediatric Patient

    Armstrong, A., Boulos, F., Kulkarni, S., Stoll, J., Doyle, M. B. M., Khan, A. & He, M., Mar 1 2023, In: Pediatric and Developmental Pathology. 26, 2, p. 153-160 8 p.

    Research output: Contribution to journalArticlepeer-review

    2 Scopus citations
  • Social and psychological adversity are associated with distinct mother and infant gut microbiome variations

    Warner, B. B., Rosa, B. A., Ndao, I. M., Tarr, P. I., Miller, J. P., England, S. K., Luby, J. L., Rogers, C. E., Hall-Moore, C., Bryant, R. E., Wang, J. D., Linneman, L. A., Smyser, T. A., Smyser, C. D., Barch, D. M., Miller, G. E., Chen, E., Martin, J. & Mitreva, M., Dec 2023, In: Nature communications. 14, 1, 5824.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    4 Scopus citations
  • Study design and methods of the Wells and Enteric disease Transmission (WET) Trial: a randomised controlled trial

    Lee, D., Denno, D., Tarr, P., Wu, J., Stokdyk, J. P., Borchardt, M. & Murphy, H. M., Mar 2 2023, In: BMJ Open. 13, 3, e068560.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • Targeted Metagenomic Sequencing for Detection of Vertebrate Viruses in Wastewater for Public Health Surveillance

    McCall, C., Leo Elworth, R. A., Wylie, K. M., Wylie, T. N., Dyson, K., Doughty, R., Treangen, T. J., Hopkins, L., Ensor, K. & Stadler, L. B., Sep 8 2023, In: ACS ES and T Water. 3, 9, p. 2955-2965 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    9 Scopus citations
  • The tetraspanin transmembrane protein CD53 mediates dyslipidemia and integrates inflammatory and metabolic signaling in hepatocytes

    Higgins, C. B., Adams, J. A., Ward, M. H., Greenberg, Z. J., Milewska, M., Sun, J., Zhang, Y., Chiquetto Paracatu, L., Dong, Q., Ballentine, S., Li, W., Wandzik, I., Schuettpelz, L. G. & DeBosch, B. J., Feb 2023, In: Journal of Biological Chemistry. 299, 2, 102835.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    11 Scopus citations
  • Vancomycin-induced gut microbial dysbiosis alters enteric neuron–macrophage interactions during a critical period of postnatal development

    Schill, E. M., Joyce, E. L., Floyd, A. N., Udayan, S., Rusconi, B., Gaddipati, S., Barrios, B. E., John, V., Kaye, M. E., Kulkarni, D. H., Pauta, J. T., McDonald, K. G. & Newberry, R. D., 2023, In: Frontiers in immunology. 14, 1268909.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    4 Scopus citations
  • Very-Early Onset Chronic Active Colitis with Heterozygous Variants in LRBA1 and CARD11, a Case of “Immune TOR-Opathies”

    He, M., Wong, A., Sutton, K., Gondim, M. J. B. & Samson, C., 2023, In: Fetal and Pediatric Pathology. 42, 2, p. 297-306 10 p.

    Research output: Contribution to journalArticlepeer-review

    2 Scopus citations
  • Virome Analysis and Association of Positive Coxsackievirus B Serology during Pregnancy with Congenital Heart Disease

    Garand, M., Huang, S. S. Y., Goessling, L. S., Wan, F., Santillan, D. A., Santillan, M. K., Brar, A., Wylie, T. N., Wylie, K. M. & Eghtesady, P., Feb 2023, In: Microorganisms. 11, 2, 262.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    2 Scopus citations
  • 2022

    A Case of Persistent Human Pegivirus Infection in Two Separate Pregnancies of a Woman

    Garand, M., Huang, S. S. Y., Goessling, L. S., Santillan, D. A., Santillan, M. K., Brar, A., Wylie, T. N., Wylie, K. M. & Eghtesady, P., Oct 2022, In: Microorganisms. 10, 10, 1925.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    2 Scopus citations
  • Alphatorquevirus is the most prevalent virus identified in blood from a matched maternal-infant preterm cohort

    Sloan, P., Rodriguez, C., Bedell, B. A., Murray, J., Dagle, J., Ryckman, K. & Holtz, L., 2022, In: Journal of Maternal-Fetal and Neonatal Medicine. 35, 9, p. 1636-1642 7 p.

    Research output: Contribution to journalArticlepeer-review

    4 Scopus citations
  • Alterations of host-gut microbiome interactions in multiple sclerosis

    Cantoni, C., Lin, Q., Dorsett, Y., Ghezzi, L., Liu, Z., Pan, Y., Chen, K., Han, Y., Li, Z., Xiao, H., Gormley, M., Liu, Y., Bokoliya, S., Panier, H., Suther, C., Evans, E., Deng, L., Locca, A., Mikesell, R. & Obert, K. & 8 others, Newland, P., Wu, Y., Albright, A., Cross, A. H., Tarr, P. I., Lovett-Racke, A., Piccio, L. & Zhou, Y., Feb 2022, In: EBioMedicine. 76, 103798.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    90 Scopus citations
  • Analysis of INSPPIRE-2 Cohort: Risk Factors and Disease Burden in Children with Acute Recurrent or Chronic Pancreatitis

    Uc, A., Cress, G. A., Wang, F., Abu-El-Haija, M., Ellery, K. M., Fishman, D. S., Gariepy, C. E., Gonska, T., Lin, T. K., Liu, Q. Y., Mehta, M., Maqbool, A., McFerron, B. A., Morinville, V. D., Ooi, C. Y., Perito, E. R., Schwarzenberg, S. J., Sellers, Z. M., Serrano, J. & Shah, U. & 5 others, Troendle, D. M., Wilschanski, M., Zheng, Y., Yuan, Y. & Lowe, M. E., Nov 1 2022, In: Journal of pediatric gastroenterology and nutrition. 75, 5, p. 643-649 7 p.

    Research output: Contribution to journalArticlepeer-review

    16 Scopus citations
  • A protocol to induce systemic autophagy and increase energy metabolism in mice using PEGylated arginine deiminase

    Zhang, Y. & DeBosch, B. J., Sep 16 2022, In: STAR Protocols. 3, 3, 101489.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Open Access
    3 Scopus citations
  • Characteristics, risk factors, and outcomes of neutropenia after liver or kidney transplantation in children

    Jarasvaraparn, C., Choudhury, S., Rusch, C., Nadler, M., Liss, K. H. H., Stoll, J., Hmiel, S., Khan, A., Doyle, M. & Kulkarni, S., Feb 2022, In: Pediatric transplantation. 26, 1, e14131.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    4 Scopus citations
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    Jarasvaraparn, C., Rusch, C., Nadler, M., Drobish, J., Stoll, J., Doyle, M. B., Khan, A. & Kulkarni, S., Oct 1 2022, In: Journal of pediatric gastroenterology and nutrition. 75, 4, p. 506-513 8 p.

    Research output: Contribution to journalArticlepeer-review

    1 Scopus citations
  • Clinical Profiles of Childhood Astrovirus-, Sapovirus-, and Norovirus-Associated Acute Gastroenteritis in Pediatric Emergency Departments in Alberta, 2014-2018

    Tarr, G. A. M., Downey, E., Pang, X. L., Zhuo, R., Strickland, A. J., Ali, S., Lee, B. E., Chui, L., Tarr, P. I. & Freedman, S. B., Feb 15 2022, In: Journal of Infectious Diseases. 225, 4, p. 723-732 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    10 Scopus citations
  • Comparison of Metagenomic Sequencing and the NanoString nCounter Analysis System for the Characterization of Bacterial and Viral Communities in Vaginal Samples

    Wylie, T. N., Schrimpf, J., Gula, H., Herter, B. N. & Wylie, K. M., Sep 2022, In: mSphere. 7, 5

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Contributing factors common to COVID-19 and gastrointestinal cancer

    Kostoff, R. N., Briggs, M. B., Kanduc, D., Shores, D. R., Kovatsi, L., Drakoulis, N., Porter, A. L., Tsatsakis, A. & Spandidos, D. A., Jan 2022, In: Oncology reports. 47, 1, 16.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations