Department of Pathology & Immunology

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  • 2024

    Deep learning-based ROI detection of AEH and EC on histopathology WSIs for predicting hormonal treatment response

    Kahaki, S., Hagemann, I. S., Cha, K. H., Trindade, C., Petrick, N., Kostelecky, N., Borden, L. E., Atwi, D., Fung, K. M. & Chen, W., 2024, Medical Imaging 2024: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 129330S. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12933).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Manipulating Light for the Detection of Viruses in Resource-Limited Settings

    Qavi, A. J., Jiang, Q., Javad Aman, M., Vu, H., Zetlin, L., Dye, J. M., Froude, J. W., Leung, D. W., Holtsberg, F., Crick, S. L. & Amarasinghe, G., 2024, Frontiers in Biological Detection: From Nanosensors to Systems XVI. Danielli, A., Miller, B. L. & Weiss, S. M. (eds.). SPIE, 128610B. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12861).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Transformer-based classifier with feature aggregation for cancer subtype classification on histopathological images

    Zhang, C., Fan, Z., Wang, Z., Sun, L., Hao, Y., Zhang, Z., Thorstad, W., Gay, H., Wang, X., Anastasio, M. A. & Li, H., 2024, Medical Imaging 2024: Image Processing. Colliot, O. & Mitra, J. (eds.). SPIE, 1292633. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12926).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2023

    Deep-Supervised Adversarial Learning-based Classification For Digital Histologic Images

    Wang, Z., Fan, Z., Sun, L., Hao, Y., Gay, H. A., Thorstad, W. L., Wang, X. & Li, H., 2023, Medical Imaging 2023: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 124711V. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12471).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Fallacies and Pitfalls in Genome-Wide Association Studies

    Hecker, J., Craig, A., Hughes, A., Neidich, J., Taswell, C. & Laird, N., 2023, 2023 Guardians Workshop, Guardians 2023. Institute of Electrical and Electronics Engineers Inc., (2023 Guardians Workshop, Guardians 2023).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    1 Scopus citations

  • Flexible polymer packaged high-Q WGM resonators for displacement detection

    Liao, J., Qavi, A. J., Adolphson, M. R. & Yang, L., 2023, Integrated Optics: Devices, Materials, and Technologies XXVII. Garcia-Blanco, S. M. & Cheben, P. (eds.). SPIE, 124241I. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 12424).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Reverse tuning of whispering gallery mode microresonators

    Adolphson, M. R., Qavi, A. J., Shmuylovich, L., Liao, J., Amarasinghe, G. K. & Yang, L., 2023, Optics and Biophotonics in Low-Resource Settings IX. Levitz, D. & Ozcan, A. (eds.). SPIE, 1236902. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12369).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Weakly Supervised Deep Learning for Predicting the Response to Hormonal Treatment of Women with Atypical Endometrial Hyperplasia: A Feasibility Study

    Kahaki, S., Hagemann, I. S., Cha, K., Trindade, C. J., Petrick, N., Kostelecky, N. & Chen, W., 2023, Medical Imaging 2023: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 124710T. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12471).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations
  • 2022

    Packaged microbubble resonators as a robust biosensing device

    Liao, J., Qavi, A. J., Adolphson, M. R. & Yang, L., 2022, Frontiers in Biological Detection: From Nanosensors to Systems XIV. Danielli, A., Miller, B. L., Weiss, S. M., Raghavachari, R. & Berezin, M. Y. (eds.). SPIE, 1197902. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11979).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • Reverse Tuning of Whispering Gallery Mode Microresonators

    Adolphson, M. R., Qavi, A. J., Shmuylovich, L., Amarasinghe, G. K. & Yang, L., 2022, Optics and Biophotonics in Low-Resource Settings VIII. Levitz, D. & Ozcan, A. (eds.). SPIE, 1195003. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11950).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations
  • 2021

    Cal-Net: Jointly Learning Classification and Calibration on Imbalanced Binary Classification Tasks

    Datta, A., Flynn, N. R. & Swamidass, S. J., Jul 18 2021, IJCNN 2021 - International Joint Conference on Neural Networks, Proceedings. Institute of Electrical and Electronics Engineers Inc., (Proceedings of the International Joint Conference on Neural Networks; vol. 2021-July).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations
  • 2020

    Complexity Analysis and u-net Based Segmentation of Meningeal Lymphatic Vessels

    Tabassum, N., Ferguson, M., Herz, J. & Acton, S. T., Nov 1 2020, Conference Record of the 54th Asilomar Conference on Signals, Systems and Computers, ACSSC 2020. Matthews, M. B. (ed.). IEEE Computer Society, p. 210-214 5 p. 9443412. (Conference Record - Asilomar Conference on Signals, Systems and Computers; vol. 2020-November).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2019

    Angle-polished fibers as a robust coupling tool for photonics

    Dong, R., Qavi, A. J., Liao, J. & Yang, L., 2019, Chemical, Biological, Radiological, Nuclear, and Explosives (CBRNE) Sensing XX. Guicheteau, J. A. & Howle, C. R. (eds.). SPIE, 1101019. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11010).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Deep learning long-range information in undirected graphs with wave networks

    Matlock, M. K., Datta, A., Dang, N. L., Jiang, K. & Swamidass, S. J., Jul 2019, 2019 International Joint Conference on Neural Networks, IJCNN 2019. Institute of Electrical and Electronics Engineers Inc., 8852455. (Proceedings of the International Joint Conference on Neural Networks; vol. 2019-July).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    12 Scopus citations

  • Packaged microbubble resonators as a robust field sensing device

    Qavi, A. J., Liao, J., Dong, R. & Yang, L., 2019, Frontiers in Biological Detection: From Nanosensors to Systems XI. Danielli, A., Miller, B. L. & Weiss, S. M. (eds.). SPIE, 108950O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10895).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Packaging of optofluidic microbubble resonator sensors

    Liao, J., Qavi, A. J., Dong, R. & Yang, L., 2019, Chemical, Biological, Radiological, Nuclear, and Explosives (CBRNE) Sensing XX. Guicheteau, J. A. & Howle, C. R. (eds.). SPIE, 110101A. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11010).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations
  • 2018

    3D visualization of the ovarian tissue scattering coefficient with swept-source optical coherence tomography

    Zeng, Y., Rao, B., Nandy, S., Hagemann, I., Siegel, C., Powell, M. & Zhu, Q., 2018, Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXII. Tuchin, V. V., Tuchin, V. V., Fujimoto, J. G. & Izatt, J. A. (eds.). SPIE, 1048338. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10483).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Nonlinear shape regression for filtering segmentation results from calcium imaging

    Wang, J., Fu, Z., Sadeghradehyazdi, N., Kipnis, J. & Acton, S. T., Aug 29 2018, 2018 IEEE International Conference on Image Processing, ICIP 2018 - Proceedings. IEEE Computer Society, p. 738-742 5 p. 8451845. (Proceedings - International Conference on Image Processing, ICIP).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Whispering-gallery microresonators for sensing technologies

    Jiang, X., Qavi, A. J. & Yang, L., 2018, Chemical, Biological, Radiological, Nuclear, and Explosives (CBRNE) Sensing XIX. Howle, C. R., Guicheteau, J. A. & Fountain, A. W. (eds.). SPIE, 106290R. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 10629).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2017

    Breast cancer histopathology image analysis pipeline for tumor purity estimation

    Azimi, V., Chang, Y. H., Thibault, G., Smith, J., Tsujikawa, T., Kukull, B., Jensen, B., Corless, C., Margolin, A. & Gray, J. W., Jun 15 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 1137-1140 4 p. 7950717. (Proceedings - International Symposium on Biomedical Imaging).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    10 Scopus citations

  • Deep learning based Nucleus Classification in pancreas histological images

    Chang, Y. H., Thibault, G., Madin, O., Azimi, V., Meyers, C., Johnson, B., Link, J., Margolin, A. & Gray, J. W., Sep 13 2017, 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Smarter Technology for a Healthier World, EMBC 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 672-675 4 p. 8036914. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    43 Scopus citations

  • Ranking vertices for active module recovery problem

    Isomurodov, J. E., Loboda, A. A. & Sergushichev, A. A., 2017, Algorithms for Computational Biology - 4th International Conference, AlCoB 2017, Proceedings. Vega-Rodriguez, M. A., Figueiredo, D., Pratas, D. & Martin-Vide, C. (eds.). Springer Verlag, p. 75-84 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10252 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations
  • 2016

    Quantitative analysis of histological tissue image based on cytological profiles and spatial statistics

    Chang, Y. H., Thibault, G., Azimi, V., Johnson, B., Jorgens, D., Link, J., Margolin, A. & Gray, J. W., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., p. 1175-1178 4 p. 7590914. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2016-October).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    8 Scopus citations

  • Solving generalized maximum-weight connected subgraph problem for network enrichment analysis

    Loboda, A. A., Artyomov, M. N. & Sergushichev, A. A., Jan 1 2016, Algorithms in Bioinformatics - 16th International Workshop, WABI 2016, Proceedings. Frith, M. & Pedersen, C. N. S. (eds.). Springer Verlag, p. 210-221 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9838 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    12 Scopus citations

  • The Role of Neoantigens in Naturally Occurring and Therapeutically Induced Immune Responses to Cancer

    Ward, J. P., Gubin, M. M. & Schreiber, R. D., 2016, Tumor Immunology, 2016. Schreiber, R. D. (ed.). Academic Press Inc., p. 25-74 50 p. (Advances in Immunology; vol. 130).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    174 Scopus citations
  • 2015

    Regulation of Tcrb Gene Assembly by Genetic, Epigenetic, and Topological Mechanisms

    Majumder, K., Bassing, C. H. & Oltz, E. M., 2015, Molecular Mechanisms that Orchestrate the Assembly of Antigen Receptor Loci, 2015. Murre, C. (ed.). Academic Press Inc., p. 273-306 34 p. (Advances in Immunology; vol. 128).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    26 Scopus citations
  • 2013

    Clinical translation of a novel microfilter technology: Capture, characterization and culture of circulating tumor cells

    Williams, A., Rawal, S., Ao, Z., Torres-Munoz, J., Balic, M., Zhou, M., Zheng, S., Tai, Y. C., Cote, R. J. & Datar, R., Jan 1 2013, IEEE EMBS Special Topic Conference on Point-of-Care (POC) Healthcare Technologies: Synergy Towards Better Global Healthcare, PHT 2013. IEEE Computer Society, p. 220-223 4 p. 6461324. (IEEE EMBS Special Topic Conference on Point-of-Care (POC) Healthcare Technologies: Synergy Towards Better Global Healthcare, PHT 2013).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • Quantitation of cancer regions in microscopic low resolution histopathological colon tissue images to predict patient survival

    Teverovskiy, M., Manilich, E., Liu, X., Portnoy, E. & Remzi, F. H., 2013, ISBI 2013 - 2013 IEEE 10th International Symposium on Biomedical Imaging: From Nano to Macro. p. 1130-1133 4 p. 6556678. (Proceedings - International Symposium on Biomedical Imaging).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Water-Immersible MEMS scanning mirror designed for wide-field fast-scanning photoacoustic microscopy

    Yao, J., Huang, C. H., Martel, C., Maslov, K. I., Wang, L., Yang, J. M., Gao, L., Randolph, G., Zou, J. & Wang, L. V., 2013, Photons Plus Ultrasound: Imaging and Sensing 2013. 858127. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8581).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
  • 2011

    Genetic algorithm for induction of finite automata with continuous and discrete output actions

    Alexandrov, A., Sergushichev, A., Kazakov, S. & Tsarev, F., 2011, Genetic and Evolutionary Computation Conference, GECCO'11 - Companion Publication. p. 775-778 4 p. (Genetic and Evolutionary Computation Conference, GECCO'11 - Companion Publication).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations

  • Silicon photonic microring resonator arrays for scalable and multiplexable bioanalysis

    Luchansky, M. S., Washburn, A. L., Qavi, A. J., Kindt, J. T., McClellan, M. S. & Bailey, R. C., 2011, Frontiers in Biological Detection: From Nanosensors to Systems III. 788802. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7888).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations
  • 2010

    HL7 CDA implementation guide for structured anatomic pathology reports methodology and tools

    Kussaibi, H., MacAry, F., Kennedy, M., Booker, D., Brodsky, V., Schrader, T., Garcia-Rojo, M. & Daniel, C., 2010, Medinfo 2010 - Proceedings of the 13th World Congress on Medical Informatics. PART 1 ed. IOS Press, p. 289-293 5 p. (Studies in Health Technology and Informatics; vol. 160, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • How do bone cells secrete proteins?

    Zhao, H., Ito, Y., Chappel, J., Andrews, N., Ross, F. P. & Teitelbaum, S. L., 2010, Osteoimmunology: Interactions of the Immune and Skeletal Systems II. Choi, Y. (ed.). p. 105-109 5 p. (Advances in Experimental Medicine and Biology; vol. 658).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • Integrins, growth factors, and the osteoclast cytoskeleton

    Zou, W. & Teitelbaum, S. L., Mar 2010, Skeletal Biology and Medicine. Blackwell Publishing Inc., p. 27-31 5 p. (Annals of the New York Academy of Sciences; vol. 1192).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    70 Scopus citations
  • 2009

    Amyloid-β dynamics correlate with neurological status in the injured human brain

    Brody, D. L., Magnoni, S., Schwetye, K. E., Spinner, M., Esparza, T. J., Stocchetti, N., Zipfel, G. J. & Holtzman, D. M., 2009, 3rd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2009. 5162305. (3rd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Applications of silicon photonic technology for clinical diagnostics and highly multiplexed biomolecular detection

    Washburn, A. L., Qavi, A. J., Luchansky, M. S., Byeon, J. Y. & Bailey, R. C., 2009, Laser Science, LS 2009. Optical Society of America (OSA), (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • A robust silicon photonic platform for multiparameter biological analysis

    Bailey, R. C., Washburn, A. L., Qavi, A. J., Iqbal, M., Gleeson, M., Tybor, F. & Gunn, L. C., 2009, Silicon Photonics IV. 72200N. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7220).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    30 Scopus citations

  • Biomechanical modeling of atherosclerotic lesions in ApoE deficient mice

    Vengrenyuk, Y., Kaplan, T. J., Cardoso, L., Randolph, G. J. & Weinbaum, S., 2009, Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009. PART A ed. p. 185-186 2 p. (Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009; no. PART A).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Templated hydrogels for combination devices: Therapeutic contact lenses

    Ali, M., Vaughan, A. D., Zhang, J., Venkatesh, S. & Byrne, M. E., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 242-245 4 p. 5332862. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations
  • 2008

    A novel 3D micro membrane filtration device for capture viable rare circulating tumor cells from whole blood

    Zheng, S., Lin, H. K., Cote, R. J. & Tai, Y. C., 2008, 2008 Solid-State Sensors, Actuators, and Microsystems Workshop. Turner, K. L. & Spangler, L. (eds.). Transducer Research Foundation, p. 134-137 4 p. (Technical Digest - Solid-State Sensors, Actuators, and Microsystems Workshop).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    6 Scopus citations

  • Biohybrid nanoparticles and hydrogel platforms with on-demand release of therapeutics by the application of nucleic acid triggers

    Venkatesh, S., Wower, J. & Byrne, M. E., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2007

    Dexamethsone suppresses bone formation via the osteoclast

    Kim, H. J., Zhao, H., Kitaura, H., Bhattacharyya, S., Brewer, J. A., Muglia, L. J., Ross, F. P. & Teitelbaum, S. L., 2007, Osteoimmunology. p. 43-46 4 p. (Advances in Experimental Medicine and Biology; vol. 602).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    15 Scopus citations

  • ETV5 is required for continuous spermatogenesis in adult mice and may mediate blood-testes barrier function and testicular immune privilege

    Morrow, C. M. K., Hostetler, C. E., Griswold, M. D., Hofmann, M. C., Murphy, K. M., Cooke, P. S. & Hess, R. A., Dec 2007, Testicular Chromosome Structure and Gene Expression. Blackwell Publishing Inc., p. 144-151 8 p. (Annals of the New York Academy of Sciences; vol. 1120).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    42 Scopus citations

  • Glucocorticoids and the osteoclast

    Kim, H. J., Zhao, H., Kitaura, H., Bhattacharyya, S., Brewer, J. A., Muglia, L. J., Patrick Ross, F. & Teitelbaum, S. L., Nov 2007, Skeletal Biology and Medicine, Part A: Aspects of Bone Morphogenesis and Remodeling. Blackwell Publishing Inc., p. 335-339 5 p. (Annals of the New York Academy of Sciences; vol. 1116).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    52 Scopus citations

  • Optical spectroscopy for therapeutic guidance in breast conserving therapy

    Keller, M. D., Majumder, S. K., Kelley, M. C., Meszoely, I., Boulos, F. I. & Mahadevan-Jansen, A., 2007, Diagnostic Optical Spectroscopy in Biomedicine IV. SPIE, 66280J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6628).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Optical spectroscopy for therapeutic guidance in breast conserving therapy

    Keller, M. D., Majumder, S. K., Kelley, M. C., Meszoely, I., Boulos, F. I. & Mahadevan-Jansen, A., 2007, European Conference on Biomedical Optics, ECBO 2007. Optical Society of America, (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • The cancer biomedical informatics grid (caBIG™): Infrastructure and applications for a worldwide research community

    Niland, J. C., Townsend, R. M., Annechiarico, R., Johnson, K., Beck, J. R., Manion, F. J., Robbins, R. J., Chute, C. G., Vogel, L. H., Saltz, J. H., Watson, M. A., Casavant, T. L., Soong, S. J., Bondy, J., Fenstermacher, D. A., Becich, M. J., Casagrande, J. T. & Tuck, D. P., 2007, MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics: Building Sustainable Health Systems. IOS Press, p. 330-334 5 p. (Studies in Health Technology and Informatics; vol. 129).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    29 Scopus citations

  • The enigmatic function of TREM-2 in osteoclastogenesis

    Colonna, M., Turnbull, I. & Klesney-Tait, J., 2007, Osteoimmunology. p. 97-105 9 p. (Advances in Experimental Medicine and Biology; vol. 602).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    42 Scopus citations
  • 2006

    Combinatorial model for sequence and spatial motif discovery in short sequence fragments: Examples from β-barrel membrane proteins

    Jackups, R. & Liang, J., 2006, 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'06. p. 3470-3473 4 p. 4030262. (Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    4 Scopus citations

  • Statistical distribution of chemical fingerprints

    Joshua Swamidass, S. & Baldi, P., Jun 23 2006, Fuzzy Logic and Applications - 6th International Workshop, WILF 2005, Revised Selected Papers. p. 11-18 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3849 LNAI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations