Department of Pathology & Immunology

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  • 2024

    Anatomy of a superenhancer

    Kim, S., Liu, T. T., Ou, F., Murphy, T. L. & Murphy, K. M., Jan 2024, Advances in Immunology. Alt, F. W. & Murphy, K. M. (eds.). Academic Press Inc., p. 51-96 46 p. (Advances in Immunology; vol. 163).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Collagens and Elastic Fiber Proteins inLung Development

    Crouch, E. C., Mecham, R. P., Davila, R. M. & Noguchi, A., Jan 1 2024, Lung Growthand Development. CRC Press, p. 327-364 38 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Drug testing in pain management

    Crews, B. O. & Pesce, A. J., Jan 1 2024, Therapeutic Drug Monitoring: Newer Drugs and Biomarkers, Second Edition. Elsevier, p. 299-329 31 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Enteroviruses

    Parikh, B. A. & Eberly, A. R., Jan 1 2024, Manual of Molecular and Clinical Laboratory Immunology, 9th Edition: Volume 1-2. wiley, Vol. 1. p. 583-591 9 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Handling Surgical Specimens to Decrease Errors in Pathology

    Boulos, F. & Attieh, M., Jan 1 2024, Principles of Perioperative Safety and Efficiency. Springer International Publishing, p. 155-167 13 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • Human Leukocyte Antigen Genotyping for Allogeneic Transplantations

    Duffy, B. F., Tang, M. S. & Liu, C., Jan 1 2024, Manual of Molecular and Clinical Laboratory Immunology, 9th Edition: Volume 1-2. wiley, Vol. 2. p. 1240-1261 22 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • Laboratory Testing in Infants and Children

    Lo, S. F. & Roper, S. M., Jan 1 2024, Nelson Textbook of Pediatrics: Volume 1-2. Elsevier, p. 4472.e3-4472.e7

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Reference Intervals for Laboratory Tests and Procedures

    Lo, S. F. & Roper, S. M., Jan 1 2024, Nelson Textbook of Pediatrics: Volume 1-2. Elsevier, p. 4472.e8-4472.e20

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • Uncommon Pediatric Tumors of the Thorax

    Messinger, Y. H., Schultz, K. A. P. & Dehner, L. P., Jan 1 2024, Textbook of Uncommon Cancer: Fifth Edition. wiley, p. 1095-1125 31 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Zoonotic Bacterial Infections Triggering Cytokine Storm Syndrome

    Otrock, Z. K. & Eby, C. S., 2024, Advances in Experimental Medicine and Biology. Springer, p. 285-291 7 p. (Advances in Experimental Medicine and Biology; vol. 1448).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • 2023

    Creating an Annotated Biospecimen Resource for Liquid Biopsy Applications

    Skates, S. J., Watson, M. & Elashoff, D., 2023, Current Cancer Research. Springer Nature, p. 409-442 34 p. (Current Cancer Research; vol. Part F1235).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Fatty Liver Disease

    Tiniakos, D. G., Anstee, Q. M., Brunt, E. M. & Burt, A. D., Jan 1 2023, MacSween's Pathology of the Liver, Eighth Edition. Elsevier, p. 330-401 72 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    5 Scopus citations
  • Functional Metagenomics to Study Antibiotic Resistance

    Mahmud, B., Boolchandani, M., Patel, S. & Dantas, G., 2023, Methods in Molecular Biology. Humana Press Inc., p. 379-401 23 p. (Methods in Molecular Biology; vol. 2601).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    3 Scopus citations
  • Host entry factors of Rift Valley Fever Virus infection

    Ganaie, S. S., Leung, D. W., Hartman, A. L. & Amarasinghe, G. K., Jan 2023, Advances in Virus Research. Kielian, M. & Roossinck, M. J. (eds.). Academic Press Inc., p. 121-136 16 p. (Advances in Virus Research; vol. 117).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    Open Access
    4 Scopus citations
  • Microfluidics, CTC Capture, Analysis and Expansion

    Mayo, V., Rawal, S., Cote, R. J. & Agarwal, A., 2023, Current Cancer Research. Springer Nature, p. 171-199 29 p. (Current Cancer Research; vol. Part F1235).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • Molecular Pathology of Gastroesophageal Tumors

    Booth, A. L. & Gonzalez, R. S., Jan 1 2023, Molecular Surgical Pathology: Second Edition. Springer International Publishing, p. 155-175 21 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Novel insights into virus–host interactions using the model organism C. elegans

    Fujii, C. & Wang, D., Jan 2023, Advances in Virus Research. Kielian, M. & Roossinck, M. J. (eds.). Academic Press Inc., p. 135-158 24 p. (Advances in Virus Research; vol. 115).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • Rapidly growing mycobacteria

    Eberly, A. R., Khare, R., Chan, E. D. & Wengenack, N. L., Jan 1 2023, Molecular Medical Microbiology, Third Edition. Elsevier, p. 1619-1634 16 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Recent advances in immunopeptidomic-based tumor neoantigen discovery

    Meng, W., Schreiber, R. D. & Lichti, C. F., Jan 2023, Advances in Immunology. Academic Press Inc., p. 1-36 36 p. (Advances in Immunology; vol. 160).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Use of CRISPR/CAS9 Technologies to Study the Role of TLR in Dendritic Cell Subsets

    Mencarelli, G., Pieroni, B., Murphy, K. M. & Gargaro, M., 2023, Methods in Molecular Biology. Humana Press Inc., p. 77-92 16 p. (Methods in Molecular Biology; vol. 2700).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • 2022

    Antibody-mediated immunity to SARS-CoV-2 spike

    Errico, J. M., Adams, L. J. & Fremont, D. H., Jan 2022, Advances in Immunology. Alt, F. W. & Murphy, K. M. (eds.). Academic Press Inc., p. 1-69 69 p. (Advances in Immunology; vol. 154).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    11 Scopus citations
  • Basics of Immunity

    Edelson, B. T., 2022, Cancer Drug Discovery and Development. Humana Press Inc., p. 13-25 13 p. (Cancer Drug Discovery and Development).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Comprehensive Determination of Amino Acids for Diagnosis of Inborn Errors of Metabolism

    Roper, S. M., Weindel, A. L. & Dietzen, D. J., 2022, Methods in Molecular Biology. Humana Press Inc., p. 55-64 10 p. (Methods in Molecular Biology; vol. 2546).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    4 Scopus citations
  • Finding a Niche: Tissue Immunity and Innate Lymphoid Cells

    Jung, H., Kim, D. H., Wang, Y. & Van Dyken, S. J., 2022, Advances in Experimental Medicine and Biology. Springer, p. 57-73 17 p. (Advances in Experimental Medicine and Biology; vol. 1365).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Immunoaffinity Purification of Epitope-Tagged DNA Repair Complexes from Human Cells

    Townley, B. A., Soll, J. M. & Mosammaparast, N., 2022, Methods in Molecular Biology. Humana Press Inc., p. 29-41 13 p. (Methods in Molecular Biology; vol. 2444).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Innate Lymphoid Cells and Inflammatory Bowel Disease

    Peng, V., Jaeger, N. & Colonna, M., 2022, Advances in Experimental Medicine and Biology. Springer, p. 97-112 16 p. (Advances in Experimental Medicine and Biology; vol. 1365).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    8 Scopus citations
  • Microbial genomics and pathogen discovery

    Gaynor, A. M. & Wang, D., Jun 3 2022, Manual of Clinical Microbiology: Tenth Edition. wiley, Vol. 1-2. p. 199-209 11 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Overview: Themes in Innate Lymphoid Cell Biology

    Colonna, M., 2022, Advances in Experimental Medicine and Biology. Springer, p. 1-6 6 p. (Advances in Experimental Medicine and Biology; vol. 1365).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Scanning the Future of Transfusion Medicine

    Menitove, J. E., Ness, P. M., Thibodeaux, S. R. & Snyder, E. L., Jan 1 2022, Practical Transfusion Medicine: Sixth Edition. wiley, p. 620-631 12 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Use of High-Performance Liquid Chromatography-Mass Spectrometry (HPLC-MS) to Quantify Modified Nucleosides

    Rodell, R., Tsao, N., Ganguly, A. & Mosammaparast, N., 2022, Methods in Molecular Biology. Humana Press Inc., p. 125-140 16 p. (Methods in Molecular Biology; vol. 2444).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    2 Scopus citations
  • 2021

    Bleeding and vitamin K deficiency

    Eby, C., Jan 5 2021, Management of Bleeding Patients. Springer International Publishing, p. 187-192 6 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Bleeding associated with coagulation factor inhibitors

    Eby, C., Jan 5 2021, Management of Bleeding Patients. Springer International Publishing, p. 113-119 7 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Bleeding associated with disseminated intravascular coagulation

    Eby, C., Jan 5 2021, Management of Bleeding Patients. Springer International Publishing, p. 181-186 6 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Brain Biomarkers: Follow-Up of RNA Expression Discovery Approach: CSF Assays for Neurogranin, SNAP-25, and VILIP-1

    Herries, E. M., Brada, N., Sutphen, C. L., Fagan, A. M. & Ladenson, J., 2021, Neuromethods. Humana Press Inc., p. 181-221 41 p. (Neuromethods; vol. 168).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • Disorders of iron metabolism

    Dietzen, D. J. & Diab, Y., Jan 1 2021, Biochemical and Molecular Basis of Pediatric Disease. Elsevier, p. 477-502 26 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Hepatic and gastrointestinal disorders

    Kulkarni, S., Roper, S. M. & Stoll, J. M., Jan 1 2021, Biochemical and Molecular Basis of Pediatric Disease. Elsevier, p. 229-266 38 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    2 Scopus citations
  • Protein modifications | Protein N-myristoylation

    Sonnenburg, E. D., Gordon, J. I. & Kitainda, V., Jul 29 2021, Encyclopedia of Biological Chemistry: Third Edition. Elsevier, Vol. 3. p. 177-181 5 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Role of Histology and Cytology in Esophageal Diseases

    Liu, X. & Goldblum, J. R., Jan 1 2021, The Esophagus: Sixth Edition. wiley, p. 218-246 29 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Surfactant protein D (SP-D)

    Crouch, E. C., Jan 1 2021, Encyclopedia of Respiratory Medicine, Second Edition. Elsevier, Vol. 1. p. 115-122 8 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Understanding and targeting human cancer regulatory t cells to improve therapy

    Kolb, H. R., Borcherding, N. & Zhang, W., 2021, Advances in Experimental Medicine and Biology. Springer, p. 229-256 28 p. (Advances in Experimental Medicine and Biology; vol. 1278).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    6 Scopus citations
  • 2020

    Fundamentals of neuropathology: Introduction to neuropathology and molecular diagnostics

    Dahiya, S. & Ramkissoon, S., Jan 1 2020, Neuro-Oncology for the Clinical Neurologist. Elsevier, p. 1-17 17 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Histologic evaluation of disease activity in inflammatory bowel disease

    Ma, C. & Liu, X., Jan 1 2020, Atlas of Endoscopy Imaging in Inflammatory Bowel Disease. Elsevier, p. 221-233 13 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Histology correlation with common endoscopic abnormalities

    Kresak, J., Shen, B. & Liu, X., Jan 1 2020, Atlas of Endoscopy Imaging in Inflammatory Bowel Disease. Elsevier, p. 525-544 20 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    1 Scopus citations
  • How secondary findings are made

    Bowling, K. M., Thompson, M. L. & Cooper, G. M., Jan 1 2020, Secondary Findings in Genomic Research. Elsevier, p. 59-75 17 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • IL-1 Signaling in Tumor Microenvironment

    Zhang, W., Borcherding, N. & Kolb, R., 2020, Advances in Experimental Medicine and Biology. Springer, p. 1-23 23 p. (Advances in Experimental Medicine and Biology; vol. 1240).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    78 Scopus citations
  • In Vitro Culture of Cryptosporidium parvum Using Stem Cell-Derived Intestinal Epithelial Monolayers

    Wilke, G., Wang, Y., Ravindran, S., Stappenbeck, T., Witola, W. H. & Sibley, L. D., 2020, Methods in Molecular Biology. Humana Press Inc., p. 351-372 22 p. (Methods in Molecular Biology; vol. 2052).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    12 Scopus citations
  • Microbiology

    Yarbrough, M. L. & Burnham, C. A. D., Jan 1 2020, Self-assessment Q and A in Clinical Laboratory Science, III. Elsevier, p. 277-292 16 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  • Rapid high-resolution typing of class I HLA genes by Nanopore sequencing

    Liu, C. & Berry, R., 2020, Methods in Molecular Biology. Humana Press Inc., p. 93-99 7 p. (Methods in Molecular Biology; vol. 2120).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    7 Scopus citations
  • The wound microbiome

    Uberoi, A., Campbell, A. & Grice, E. A., Jan 1 2020, Wound Healing, Tissue Repair, and Regeneration in Diabetes. Elsevier, p. 237-258 22 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    3 Scopus citations
  • Thyroid and Parathyroid Glands

    Chernock, R. & Williams, M. D., Jan 1 2020, Gnepp's Diagnostic Surgical Pathology of the Head and Neck, Third Edition. Elsevier, p. 606-688 83 p.

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review