Department of Neurology

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  • 2009

    Amyloid-β dynamics correlate with neurological status in the injured human brain

    Brody, D. L., Magnoni, S., Schwetye, K. E., Spinner, M., Esparza, T. J., Stocchetti, N., Zipfel, G. J. & Holtzman, D. M., 2009, 3rd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2009. 5162305. (3rd International Conference on Bioinformatics and Biomedical Engineering, iCBBE 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Clinical attribute network for chronic lymphocytic leukemia

    Kundu, A., Ozer, H. G., Borlawsky, T., Circle, K. C., Huang, K. & Payne, P., 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2009. p. 279-282 4 p. 5341786. (2009 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Hierarchical unbiased group-wise registration for atlas construction and population comparison

    Chen, Y., Shen, D., Zhu, H., An, H., Gilmore, J. & Lin, W., 2009, Medical Imaging 2009 - Image Processing. 72592V. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7259).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • LSTGEE: Longitudinal analysis of neuroimaging data

    Li, Y., Zhu, H., Chen, Y., An, H., Gilmore, J., Lin, W. & Shen, D., 2009, Medical Imaging 2009 - Image Processing. 72590F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7259).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Mapping growth patterns and genetic influences on early brain development in twins

    Chen, Y., Zhu, H., Shen, D., An, H., Gilmore, J. & Lin, W., 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI2009 - 12th International Conference, Proceedings. PART 2 ed. p. 232-239 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5762 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    5 Scopus citations

  • Quantification of cortical surface convolution in the developing ferret and human infant

    Knutsen, A. K., Hill, J. E., Neil, J. J., Inder, T. E. & Bayly, P. V., 2009, Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009. PART B ed. p. 1225-1226 2 p. (Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009; no. PART B).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • RADTI: Regression analyses of diffusion tensor images

    Li, Y., Zhu, H., Chen, Y., Ibrahim, J. G., An, H., Lin, W., Hall, C. & Shen, D., 2009, Medical Imaging 2009 - Image Processing. 72591C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7259).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Segmentation and classification of triple negative breast cancers using dce-mri

    Agner, S. C., Xu, J., Fatakdawala, H., Ganesan, S., Madabhushi, A., Englander, S., Rosen, M., Thomas, K., Schnall, M., Feldman, M. & Tomaszewski, J., 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. p. 1227-1230 4 p. 5193283. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    20 Scopus citations
  • 2008

    A roadmap for caGrid, an enterprise Grid architecture for biomedical research

    Saltz, J., Hastings, S., Langella, S., Oster, S., Kurc, T., Payne, P., Ferreira, R., Plale, B., Goble, C., Ervin, D., Sharma, A., Pan, T., Permar, J., Brezany, P., Siebenlist, F., Madduri, R., Foster, I., Shanbhag, K., Mead, C. & Hong, N. C., 2008, Global Healthgrid: E-Science Meets Biomedical Informatics - Proceedings of HealthGrid 2008. IOS Press, p. 224-237 14 p. (Studies in Health Technology and Informatics; vol. 138).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • Automated gland and nuclei segmentation for grading of prostate and breast cancer histopathology

    Naik, S., Doyle, S., Agner, S., Madabhushi, A., Feldman, M. & Tomaszewski, J., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 284-287 4 p. 4540988. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    291 Scopus citations

  • Automated grading of breast cancer histopathology using spectral clustering with textural and architectural image features

    Doyle, S., Agner, S., Madabhushi, A., Feldman, M. & Tomaszewski, J., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 496-499 4 p. 4541041. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    253 Scopus citations

  • Novel kinetic texture features for breast lesion classification on dynamic contrast enhanced (DCE) MRI

    Agner, S. C., Soman, S., Libfeld, E., McDonald, M., Rosen, M. A., Schnall, M. D., Chin, D., Nosher, J. & Madabhushi, A., 2008, Medical Imaging 2008 - Computer-Aided Diagnosis. 69152C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6915).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations
  • 2007

    A day in the life of a clinical research coordinator: Observations from community practice settings

    Khan, S. A., Kukafka, R., Payne, P. R. O., Bigger, J. T. & Johnson, S. B., Jan 1 2007, MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics: Building Sustainable Health Systems. IOS Press, p. 247-251 5 p. (Studies in Health Technology and Informatics; vol. 129).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    12 Scopus citations

  • Directional diffusivity as a magnetic resonance (MR) biomarker in demyelinating disease

    Benzinger, T. L. S., Cross, A. H., Xu, J., Naismith, R., Sun, S. W. & Song, S. K., 2007, Smart Biomedical and Physiological Sensor Technology V. 67590O. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6759).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • MRI measurement of surface strain due to growth in the developing ferret brain

    Knutsen, A. K., Kroenke, C. D., Taber, L. A., Neil, J. J. & Bayly, P. V., Dec 1 2007, Proceedings of the ASME Summer Bioengineering Conference 2007, SBC 2007. p. 551-552 2 p. (Proceedings of the ASME Summer Bioengineering Conference 2007, SBC 2007).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Near-infrared Raman spectroscopy for in-vivo diagnosis of cervical dysplasia - A probability-based multi-class diagnostic algorithm

    Majumder, S. K., Kanter, E., Viehoever, A. R., Jones, H. & Mahadevan-Jansen, A., 2007, Advanced Biomedical and Clinical Diagnostic Systems V. 64300Q. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6430).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    6 Scopus citations
  • 2006

    A methodology to study Multiple Sclerosis (MS) based on distributions of standardized intensities in segmented tissue regions

    Lei, T., Udupa, J. K., Odhner, D., Mishra, S., Wu, G., Schwartz, E., Ying, G. S., Iwanaga, T., Desiderio, L. & Balcer, L., 2006, Medical Imaging 2006: Physiology, Function, and Structure from Medical Images. 61430V. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6143 I).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Imaging across scale: The promise of multi-modal imaging

    Larson-Prior, L. J., Zempel, J. & Snyder, A. Z., 2006, 2006 IEEE/NLM Life Science Systems and Applications Workshop, LiSA 2006. 4015836. (2006 IEEE/NLM Life Science Systems and Applications Workshop, LiSA 2006).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Information theoretic ultrasound imaging differentiates dystrophin-deficient and normal skeletal muscle in humans

    Hughes, M. S., Marsh, J. N., Brown, P. A., Wallace, K. D., Connolly, A. M., Wickline, S. A. & McCarthy, J. E., Dec 1 2006, 2006 IEEE International Ultrasonics Symposium, IUS. p. 1095-1098 4 p. 4152137. (Proceedings - IEEE Ultrasonics Symposium; vol. 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Presentation Discovery: Building a better icon

    Payne, P. R. O. & Starren, J., 2006, CHI'06 Extended Abstracts on Human Factors in Computing Systems, CHI EA'06. p. 1223-1228 6 p. (Conference on Human Factors in Computing Systems - Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    5 Scopus citations

  • RNAi in combination with a ribozyme and TAR decoy for treatment of HIV infection in hematopoietic cell gene therapy

    Li, M., Li, H. & Rossi, J. J., Oct 2006, Oligonucleotide Therapeutics: First Annual Meeting of the Oligonucleotide Therapeutics Society. Blackwell Publishing Inc., p. 172-179 8 p. (Annals of the New York Academy of Sciences; vol. 1082).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    51 Scopus citations
  • 2005

    Tuning the elasticity of biopolymer gels for optimal wound healing

    Georges, P. C., McCormick, M., Flanagan, L. A., Ju, Y. E., Sawyer, E. & Janmey, P. A., 2005, Biomimetic Polymers and Gels. Materials Research Society, p. 11-16 6 p. (Materials Research Society Symposium Proceedings; vol. 897).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations
  • 2002

    Near Infrared Raman Spectroscopy for Cancer Detection in vivo

    Mahadevan-Jansen, A., Robichaux, A., Lieber, C., Shappell, H., Ellis, D. & Jones, H. W., 2002, Biomedical Topical Meeting, BIOMED 2002. Optica Publishing Group (formerly OSA), p. 345-348 4 p. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations
  • 2000

    Molecular mechanics and cell biology: Growing cells on softmaterials

    Ju, Y. E., Janmey, P. A. & Flanagan, L. A., 2000, Advances in Bioengineering. American Society of Mechanical Engineers (ASME), p. 55-56 2 p. (ASME International Mechanical Engineering Congress and Exposition, Proceedings (IMECE); vol. 2000-D).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 1999

    Comparison of land-mark-based and curve-based thin-plate warps for analysis of left-ventricular motion from tagged MRI

    Amini, A. A., Chen, Y. & Abendschein, D., 1999, Medical Image Computing and Computer-Assisted Intervention –MICCAI 1999 - 2nd International Conference, Proceedings. Taylor, C. & Colchester, A. (eds.). Springer Verlag, p. 498-507 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1679).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    4 Scopus citations

  • Increased tissue nitric oxide (NO) and cortical blood flow during functional activation of rat brain

    Buerk, D. G., Ances, B. M., Detre, J. A. & Greenberg, J. H., 1999, Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. IEEE, p. 366 1 p. (Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings; vol. 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 1998

    Constrained thin-plate spline reconstruction of 2D deformations from tagged MRI1

    Amini, A. A., Chen, Y., Jean Sun, S. & Maniz, V., Jan 1 1998, Proceedings - Workshop on Biomedical Image Analysis, WBIA 1998. Vemuri, B. (ed.). Institute of Electrical and Electronics Engineers Inc., p. 1-10 10 p. (Proceedings - Workshop on Biomedical Image Analysis, WBIA 1998; vol. 1998-January).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Dense 2D displacement reconstruction from SPAMM-MRI with constrained elastic splines: Implementation and validation

    Amini, A. A., Chen, Y., Sun, J. & Mani, V., 1998, Medical Image Computing and Computer-Assisted Intervention ─ MICCAI 1998 - 1st International Conference, Proceedings. Wells, W. M., Colchester, A. & Delp, S. (eds.). Springer Verlag, p. 167-176 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1496).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
  • 1993

    Role of neural networks in the study of the Posterior Parietal Cortex

    Mazzoni, P. & Andersen, R. A., Jan 1 1993, 1993 IEEE International Conference on Neural Networks. Publ by IEEE, p. 1321-1326 6 p. (1993 IEEE International Conference on Neural Networks).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Role of neural networks in the study of the Posterior Parietal Cortex

    Mazzoni, P. & Andersen, R. A., Jan 1 1993, 1993 IEEE International Conference on Neural Networks. Publ by IEEE, p. 1321-1326 6 p. (1993 IEEE International Conference on Neural Networks).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 1990

    Diffusion imaging with single shot MRI

    Rosen, B. R., McKinstry, R. M., Weisskoff, R. M., Cohen, M. S., Kwong, K. K., Rzedzian, R. & Brady, T. J., Dec 1 1990, Biomedical Engineering Perspectives: Health Care Technologies for the 1990's and Beyond. pt 1 ed. Publ by IEEE, 1 p. (Proceedings of the Annual Conference on Engineering in Medicine and Biology; no. pt 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review