Search results

  • Corrigendum: The 4D nucleome project (Nature (2017) 549 (219-226) DOI: 10.1038/nature23884)

    4D Nucleome Network, Dec 14 2017, In: Nature. 552, 7684, p. 278 1 p.

    Research output: Contribution to journalComment/debate

    Open Access
    4 Scopus citations
  • Corrigendum: Spec-seq: Determining protein-DNA-binding specificity by sequencing (Briefings in Functional Genomics DOI: 10.1093/bfgp/elu043)

    Zuo, Z., Chang, Y. K. & Stormo, G. D., Mar 1 2022, In: Briefings in Functional Genomics. 21, 2, p. 142 1 p.

    Research output: Contribution to journalComment/debate

    Open Access
  • Corrigendum to "A revised nomenclature for the human and rodent α-tubulin gene family" [Genomics 90 (2007) 285-289] (DOI:10.1016/j.ygeno.2007.04.008)

    Khodiyar, V. K., Maltais, L. J., Ruef, B. J., Sneddon, K. M. B., Smith, J. R., Shimoyama, M., Cabral, F., Dumontet, C., Dutcher, S. K., Harvey, R. J., Lafanechère, L., Murray, J. M., Nogales, E., Piquemal, D., Stanchi, F., Povey, S. & Lovering, R. C., Apr 2009, In: Genomics. 93, 4, p. 397 1 p.

    Research output: Contribution to journalComment/debate

    Open Access
  • Coupling interval and types of ventricular ectopic activity associated with ventricular runs

    Thanavaro, S., Kleiger, R. E., Miller, J. P., Province, M. A., Friedman, E. & Oliver, G. C., Sep 1983, In: American heart journal. 106, 3, p. 484-491 8 p.

    Research output: Contribution to journalArticlepeer-review

    13 Scopus citations
  • Coupling of Rigor Mortis and Intestinal Necrosis during C. elegans Organismal Death

    Galimov, E. R., Pryor, R. E., Poole, S. E., Benedetto, A., Pincus, Z. & Gems, D., Mar 6 2018, In: Cell Reports. 22, 10, p. 2730-2741 12 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    18 Scopus citations
  • Covariates in linkage analysis

    Rice, J. P., Rochberg, N., Neuman, R. J., Saccone, N. L., Liu, K. Y., Zhang, X. & Culverhouse, R., 1999, In: Genetic Epidemiology. 17, SUPPL. 1, p. S691-S695

    Research output: Contribution to journalArticlepeer-review

    Open Access
    29 Scopus citations
  • Covariates in linkage analysis using sibling and cousin pairs

    Saccone, N. L., Rochberg, N., Neuman, R. J. & Rice, J. P., 2001, In: Genetic Epidemiology. 21, SUPPL. 1, p. S540-S545

    Research output: Contribution to journalArticlepeer-review

    6 Scopus citations
  • Creating an ontology-based human phenotyping system: The Rockefeller University bleeding history experience.

    Mauer, A. C., Barbour, E. M., Khazanov, N. A., Levenkova, N., Mollah, S. A. & Coller, B. S., Oct 2009, In: Clinical and translational science. 2, 5, p. 382-385 4 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    10 Scopus citations
  • CRISPRi screens reveal a DNA methylation-mediated 3D genome dependent causal mechanism in prostate cancer

    Ahmed, M., Soares, F., Xia, J. H., Yang, Y., Li, J., Guo, H., Su, P., Tian, Y., Lee, H. J., Wang, M., Akhtar, N., Houlahan, K. E., Bosch, A., Zhou, S., Mazrooei, P., Hua, J. T., Chen, S., Petricca, J., Zeng, Y. & Davies, A. & 12 others, Fraser, M., Quigley, D. A., Feng, F. Y., Boutros, P. C., Lupien, M., Zoubeidi, A., Wang, L., Walsh, M. J., Wang, T., Ren, S., Wei, G. H. & He, H. H., Dec 1 2021, In: Nature communications. 12, 1, 1781.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    31 Scopus citations
  • Critical and distinct roles for key RET tyrosine docking sites in renal development

    Jain, S., Encinas, M., Johnson, E. M. & Milbrandt, J., Feb 1 2006, In: Genes and Development. 20, 3, p. 321-333 13 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    134 Scopus citations
  • Cross-generational THC exposure alters the developmental sensitivity of ventral and dorsal striatal gene expression in male and female offspring

    Szutorisz, H., Egervári, G., Sperry, J., Carter, J. M. & Hurd, Y. L., Nov 1 2016, In: Neurotoxicology and Teratology. 58, p. 107-114 8 p.

    Research output: Contribution to journalReview articlepeer-review

    45 Scopus citations
  • Cross-Species Transmission and Differential Fate of an Endogenous Retrovirus in Three Mammal Lineages

    Zhuo, X. & Feschotte, C., Nov 1 2015, In: PLoS pathogens. 11, 11, e1005279.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    40 Scopus citations
  • Cross-trait familial resemblance for body fat and blood pressure: Familial correlations in the Québec family study

    Rice, T., Province, M., Perusse, L., Bouchard, C. & Rao, D. C., Nov 1994, In: American journal of human genetics. 55, 5, p. 1019-1029 11 p.

    Research output: Contribution to journalArticlepeer-review

    51 Scopus citations
  • c-Src is required for glial cell line-derived neurotrophic factor (GDNF) family ligand-mediated neuronal survival via a phosphatidylinositol-3 kinase (PI-3K)-dependent pathway

    Encinas, M., Tansey, M. G., Tsui-Pierchala, B. A., Comella, J. X., Milbrandt, J. & Johnson, E. M., Mar 1 2001, In: Journal of Neuroscience. 21, 5, p. 1464-1472 9 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    147 Scopus citations
  • Cullin-3 regulates pattern formation, external sensory organ development and cell survival during Drosophila development

    Mistry, H., Wilson, B. A., Roberts, I. J. H., O'Kane, C. J. & Skeath, J. B., Dec 2004, In: Mechanisms of Development. 121, 12, p. 1495-1507 13 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    30 Scopus citations
  • Current Protocols in Bioinformatics: Preface

    Baxevanis, A. D., Davison, D. B., Page, R. D. M., Petsko, G. A., Stein, L. D., Stormo, G. D. & Yates, J., 2010, In: Current Protocols in Bioinformatics. SUPPL. 29, p. iii-vi

    Research output: Contribution to journalEditorial

    2 Scopus citations
  • Current Smoking Raises Risk of Incident Hypertension: Hispanic Community Health Study-Study of Latinos

    Kaplan, R. C., Baldoni, P. L., Strizich, G. M., Pérez-Stable, E. J., Saccone, N. L., Peralta, C. A., Perreira, K. M., Gellman, M. D., Williams-Nguyen, J. S., Rodriguez, C. J., Lee, D. J., Daviglus, M., Talavera, G. A., Lash, J. P., Cai, J. & Franceschini, N., Feb 1 2021, In: American Journal of Hypertension. 34, 2, p. 190-197 8 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    22 Scopus citations
  • CUT&Tag2for1: a modified method for simultaneous profiling of the accessible and silenced regulome in single cells

    Janssens, D. H., Otto, D. J., Meers, M. P., Setty, M., Ahmad, K. & Henikoff, S., Dec 2022, In: Genome biology. 23, 1, 81.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    28 Scopus citations
  • CUUCGG hairpins: extraordinarily stable RNA secondary structures associated with various biochemical processes.

    Tuerk, C., Gauss, P., Thermes, C., Groebe, D. R., Gayle, M., Guild, N., Stormo, G., d'Aubenton-Carafa, Y., Uhlenbeck, O. C. & Tinoco, I., Mar 1988, In: Proceedings of the National Academy of Sciences of the United States of America. 85, 5, p. 1364-1368 5 p.

    Research output: Contribution to journalArticlepeer-review

    330 Scopus citations
  • Cyclic ADP ribose isomers: Production, chemical structures, and immune signaling

    Manik, M. K., Shi, Y., Li, S., Zaydman, M. A., Damaraju, N., Eastman, S., Smith, T. G., Gu, W., Masic, V., Mosaiab, T., Weagley, J. S., Hancock, S. J., Vasquez, E., Hartley-Tassell, L., Kargios, N., Maruta, N., Lim, B. Y. J., Burdett, H., Landsberg, M. J. & Schembri, M. A. & 9 others, Prokes, I., Song, L., Grant, M., DiAntonio, A., Nanson, J. D., Guo, M., Milbrandt, J., Ve, T. & Kobe, B., Sep 30 2022, In: Science. 377, 6614, eadc8969.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    68 Scopus citations
  • Cyclin-Dependent Kinases Are Regulators and Effectors of Oscillations Driven by a Transcription Factor Network

    Simmons Kovacs, L. A., Mayhew, M. B., Orlando, D. A., Jin, Y., Li, Q., Huang, C., Reed, S. I., Mukherjee, S. & Haase, S. B., Mar 9 2012, In: Molecular cell. 45, 5, p. 669-679 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    57 Scopus citations
  • Cyclin e and CDK-2 regulate proliferative cell fate and cell cycle progression in the C. elegans germline

    Fox, P. M., Vought, V. E., Hanazawa, M., Lee, M. H., Maine, E. M. & Sched, T., Jun 1 2011, In: Development. 138, 11, p. 2223-2234 12 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    117 Scopus citations
  • CYP2A6 metabolism in the development of smoking behaviors in young adults

    Olfson, E., Bloom, J., Bertelsen, S., Budde, J. P., Breslau, N., Brooks, A., Culverhouse, R., Chan, G., Chen, L. S., Chorlian, D., Dick, D. M., Edenberg, H. J., Hartz, S., Hatsukami, D., Hesselbrock, V. M., Johnson, E. O., Kramer, J. R., Kuperman, S., Meyers, J. L. & Nurnberger, J. & 8 others, Porjesz, B., Saccone, N. L., Schuckit, M. A., Stitzel, J., Tischfield, J. A., Rice, J. P., Goate, A. & Bierut, L. J., Jan 2018, In: Addiction Biology. 23, 1, p. 437-447 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations
  • Open Access
    18 Scopus citations
  • CYP2D6 Genotype and Adjuvant Tamoxifen: Meta-Analysis of Heterogeneous Study Populations

    Province, M. A., Goetz, M. P., Brauch, H., Flockhart, D. A., Hebert, J. M., Whaley, R., Suman, V. J., Schroth, W., Winter, S., Zembutsu, H., Mushiroda, T., Newman, W. G., Lee, M. T. M., Ambrosone, C. B., Beckmann, M. W., Choi, J. Y., Dieudonné, A. S., Fasching, P. A., Ferraldeschi, R. & Gong, L. & 44 others, Haschke-Becher, E., Howell, A., Jordan, L. B., Hamann, U., Kiyotani, K., Krippl, P., Lambrechts, D., Latif, A., Langsenlehner, U., Lorizio, W., Neven, P., Nguyen, A. T., Park, B. W., Purdie, C. A., Quinlan, P., Renner, W., Schmidt, M., Schwab, M., Shin, J. G., Stingl, J. C., Wegman, P., Wingren, S., Wu, A. H. B., Ziv, E., Zirpoli, G., Thompson, A. M., Jordan, V. C., Nakamura, Y., Altman, R. B., Ames, M. M., Weinshilboum, R. M., Eichelbaum, M., Ingle, J. N., Klein, T. E., Boländer, J., Ulmer, H. U., Fischer-Bosch, M., Fritz, P., Simon, W., Bryan, Y., Strick, R., Koelbl, H., Ambrosone, C. A. & H, E. Z., Feb 1 2014, In: Clinical pharmacology and therapeutics. 95, 2, p. 216-227 12 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    153 Scopus citations
  • Cytochrome p450 gene variants, race, and mortality among clopidogrel-treated patients after acute myocardial infarction

    Cresci, S., Depta, J. P., Lenzini, P. A., Li, A. Y., Lanfear, D. E., Province, M. A., Spertus, J. A. & Bach, R. G., Jun 2014, In: Circulation: Cardiovascular Genetics. 7, 3, p. 277-286 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    50 Scopus citations
  • Cytoplasmic “ciliary inclusions” in isolation are not sufficient for the diagnosis of primary ciliary dyskinesia

    Vece, T. J., Sagel, S. D., Zariwala, M. A., Sullivan, K. M., Burns, K. A., Dutcher, S. K., Yusupov, R., Leigh, M. W. & Knowles, M. R., Jan 1 2020, In: Pediatric Pulmonology. 55, 1, p. 130-135 6 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    2 Scopus citations
  • Dairy intake and body composition and cardiometabolic traits among adults: Mendelian randomization analysis of 182041 individuals from 18 studies

    Huang, T., Sun, D., Heianza, Y., Bergholdt, H. K. M., Gao, M., Fang, Z., Ding, M., Frazier-Wood, A. C., North, K. E., Marouli, E., Graff, M., Smith, C. E., Varbo, A., Lemaitre, R. N., Corella, D., Wang, C. A., Tjønneland, A., Overvad, K., Sørensen, T. I. A. & Feitosa, M. F. & 36 others, Wojczynski, M. K., Kähönen, M., Mikkilä, V., Bartz, T. M., Psaty, B. M., Siscovick, D. S., Danning, R. D., Dedoussis, G., Pedersen, O., Hansen, T., Havulinna, A. S., Männistö, S., Rotter, J. I., Sares-Jäske, L., Allison, M. A., Rich, S. S., Sorlí, J. V., Coltell, O., Pennell, C. E., Eastwood, P., Ridker, P. M., Viikari, J., Raitakari, O., Lehtimäki, T., Helminen, M., Wang, Y., Deloukas, P., Knekt, P., Kanerva, N., Kilpeläinen, T. O., Province, M. A., Mozaffarian, D., Chasman, D. I., Nordestgaard, B. G., Ellervik, C. & Qi, L., Jun 2019, In: Clinical chemistry. 65, 6, p. 751-760 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    22 Scopus citations
  • Open Access
    10 Scopus citations
  • Dbx mediates neuronal specification and differentiation through cross-repressive, lineage-specific interactions with eve and hb9

    Lacin, H., Zhu, Y., Wilson, B. A. & Skeath, J. B., Oct 1 2009, In: Development. 136, 19, p. 3257-3266 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    31 Scopus citations
  • Deciphering adaptor specificity in GFL-dependent RET-mediated proliferation and neurite outgrowth

    Gustin, J. A., Yang, M., Johnson, E. M. & Milbrandt, J., Aug 2007, In: Journal of Neurochemistry. 102, 4, p. 1184-1194 11 p.

    Research output: Contribution to journalArticlepeer-review

    9 Scopus citations
  • Deciphering peripheral nerve myelination by using Schwann cell expression profiling

    Nagarajan, R., Le, N., Mahoney, H., Araki, T. & Milbrandt, J., Jun 25 2002, In: Proceedings of the National Academy of Sciences of the United States of America. 99, 13, p. 8998-9003 6 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    119 Scopus citations
  • Deconstructing Stepwise Fate Conversion of Human Fibroblasts to Neurons by MicroRNAs

    Cates, K., McCoy, M. J., Kwon, J. S., Liu, Y., Abernathy, D. G., Zhang, B., Liu, S., Gontarz, P., Kim, W. K., Chen, S., Kong, W., Ho, J. N., Burbach, K. F., Gabel, H. W., Morris, S. A. & Yoo, A. S., Jan 7 2021, In: Cell Stem Cell. 28, 1, p. 127-140.e9

    Research output: Contribution to journalArticlepeer-review

    Open Access
    38 Scopus citations
  • Deep-coverage whole genome sequences and blood lipids among 16,324 individuals

    NHLBI TOPMed Lipids Working Group, Natarajan, P., Peloso, G. M., Zekavat, S. M., Montasser, M., Ganna, A., Chaffin, M., Khera, A. V., Zhou, W., Bloom, J. M., Engreitz, J. M., Ernst, J., O’Connell, J. R., Ruotsalainen, S. E., Alver, M., Manichaikul, A., Johnson, W. C., Perry, J. A., Poterba, T. & Seed, C. & 31 others, Surakka, I. L., Esko, T., Ripatti, S., Salomaa, V., Correa, A., Vasan, R. S., Kellis, M., Neale, B. M., Lander, E. S., Abecasis, G., Mitchell, B., Rich, S. S., Wilson, J. G., Cupples, L. A., Rotter, J. I., Willer, C. J., Kathiresan, S., Abe, N., Albert, C., Allred, N. P., Almasy, L., Alonso, A., Ament, S., Anderson, P., Anugu, P., Applebaum-Bowden, D., Dutcher, S., Fulton, L., Gu, C. C., Rao, D. C. & Sung, Y. J., Dec 1 2018, In: Nature communications. 9, 1, 3391.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    124 Scopus citations
  • Deep coverage whole genome sequences and plasma lipoprotein(a) in individuals of European and African ancestries

    Zekavat, S. M., Ruotsalainen, S., Handsaker, R. E., Alver, M., Bloom, J., Poterba, T., Seed, C., Ernst, J., Chaffin, M., Engreitz, J., Peloso, G. M., Manichaikul, A., Yang, C., Ryan, K. A., Fu, M., Johnson, W. C., Tsai, M., Budoff, M., Ramachandran, V. S. & Cupples, L. A. & 323 others, Rotter, J. I., Rich, S. S., Post, W., Mitchell, B. D., Correa, A., Metspalu, A., Wilson, J. G., Salomaa, V., Kellis, M., Daly, M. J., Neale, B. M., McCarroll, S., Surakka, I., Esko, T., Ganna, A., Ripatti, S., Kathiresan, S., Natarajan, P., Abe, N., Abecasis, G., Albert, C., Allred, N. P., Almasy, L., Alonso, A., Ament, S., Anderson, P., Anugu, P., Applebaum-Bowden, D., Arking, D., Arnett, D. K., Ashley-Koch, A., Aslibekyan, S., Assimes, T., Auer, P., Avramopoulos, D., Barnard, J., Barnes, K., Barr, R. G., Barron-Casella, E., Beaty, T., Becker, D., Becker, L., Beer, R., Begum, F., Beitelshees, A., Benjamin, E., Bezerra, M., Bielak, L., Bis, J., Blackwell, T., Blangero, J., Boerwinkle, E., Borecki, I., Bowler, R., Brody, J., Broeckel, U., Broome, J., Bunting, K., Burchard, E., Cardwell, J., Carty, C., Casaburi, R., Casella, J., Chang, C., Chasman, D., Chavan, S., Chen, B. J., Chen, W. M., Chen, Y. D. I., Cho, M., Choi, S. H., Chuang, L. M., Chung, M., Cornell, E., Crandall, C., Crapo, J., Curran, J., Curtis, J., Custer, B., Damcott, C., Darbar, D., Das, S., David, S., Davis, C., Daya, M., Andrade, M. D., Debaun, M., Deka, R., Demeo, D., Devine, S., Do, R., Duan, Q., Duggirala, R., Durda, P., Dutcher, S., Eaton, C., Ekunwe, L., Ellinor, P., Emery, L., Farber, C., Farnam, L., Fingerlin, T., Flickinger, M., Fornage, M., Franceschini, N., Fullerton, S. M., Fulton, L., Gabriel, S., Gan, W., Gao, Y., Gass, M., Gelb, B., Geng, X., Germer, S., Gignoux, C., Gladwin, M., Glahn, D., Gogarten, S., Gong, D. W., Goring, H., Gu, C. C., Guan, Y., Guo, X., Haessler, J., Hall, M., Harris, D., Hawley, N., He, J., Heavner, B., Heckbert, S., Hernandez, R., Herrington, D., Hersh, C., Hidalgo, B., Hixson, J., Hokanson, J., Hong, E., Hoth, K., Hsiung, C., Huston, H., Hwu, C. M., Irvin, M. R., Jackson, R., Jain, D., Jaquish, C., Jhun, M. A., Johnsen, J., Johnson, A., Johnston, R., Jones, K., Kang, H. M., Kaplan, R., Kardia, S., Kaufman, L., Kelly, S., Kenny, E., Kessler, M., Khan, A., Kinney, G., Konkle, B., Kooperberg, C., Kramer, H., Krauter, S., Lange, C., Lange, E., Lange, L., Laurie, C., Laurie, C., Leboff, M., Lee, S. S., Lee, W. J., Lefaive, J., Levine, D., Levy, D., Lewis, J., Li, Y., Lin, H., Lin, K. H., Liu, S., Liu, Y., Loos, R., Lubitz, S., Lunetta, K., Luo, J., Mahaney, M., Make, B., Manson, J. A., Margolin, L., Martin, L., Mathai, S., Mathias, R., McArdle, P., McDonald, M. L., McFarland, S., McGarvey, S., Mei, H., Meyers, D. A., Mikulla, J., Min, N., Minear, M., Minster, R. L., Montasser, M. E., Musani, S., Mwasongwe, S., Mychaleckyj, J. C., Nadkarni, G., Naik, R., Nekhai, S., Nickerson, D., North, K., O'connell, J., O'connor, T., Ochs-Balcom, H., Pankow, J., Papanicolaou, G., Parker, M., Parsa, A., Penchev, S., Peralta, J. M., Perez, M., Perry, J., Peters, U., Peyser, P., Phillips, L., Phillips, S., Pollin, T., Becker, J. P., Boorgula, M. P., Preuss, M., Prokopenko, D., Psaty, B., Qasba, P., Qiao, D., Qin, Z., Rafaels, N., Raffield, L., Rao, D. C., Rasmussen-Torvik, L., Ratan, A., Redline, S., Reed, R., Regan, E., Reiner, A., Rice, K., Roden, D., Roselli, C., Ruczinski, I., Russell, P., Ruuska, S., Sakornsakolpat, P., Salimi, S., Salzberg, S., Sandow, K., Sankaran, V., Scheller, C., Schmidt, E., Schwander, K., Schwartz, D., Sciurba, F., Seidman, C., Sheehan, V., Shetty, A., Shetty, A., Sheu, W. H. H., Shoemaker, M. B., Silver, B., Silverman, E., Smith, J., Smith, J., Smith, N., Smith, T., Smoller, S., Snively, B., Sofer, T., Sotoodehnia, N., Stilp, A., Streeten, E., Sung, Y. J., Sylvia, J., Szpiro, A., Sztalryd, C., Taliun, D., Tang, H., Taub, M., Taylor, K., Taylor, S., Telen, M., Thornton, T. A., Tinker, L., Tirschwell, D., Tiwari, H., Tracy, R., Vaidya, D., Vandehaar, P., Vrieze, S., Walker, T., Wallace, R., Walts, A., Wan, E., Wang, F. F., Watson, K., Weeks, D. E., Weir, B., Weiss, S., Weng, L. C., Willer, C., Williams, K., Williams, L. K., Wilson, C., Wong, Q., Xu, H., Yanek, L., Yang, I., Yang, R., Zaghloul, N., Zhang, Y., Zhao, S. X., Zhao, W., Zheng, X., Zhi, D., Zhou, X., Zody, M. & Zoellner, S., Dec 1 2018, In: Nature communications. 9, 1, 2606.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    71 Scopus citations
  • DeepH&M: Estimating single-CpG hydroxymethylation and methylation levels from enrichment and restriction enzyme sequencing methods

    He, Y., Jang, H. S., Xing, X., Li, D., Vasek, M. J., Dougherty, J. D. & Wang, T., Jul 2020, In: Science Advances. 6, 27, eaba0521.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    5 Scopus citations
  • Defining alcohol-related phenotypes in humans: The collaborative study on the genetics of alcoholism

    Bierut, L. J., Saccone, N. L., Rice, J. P., Goate, A., Foroud, T., Edenberg, H., Almasy, L., Conneally, P. M., Crowe, R., Hesselbrock, V., Li, T. K., Nurnberger, J., Porjesz, B., Schuckit, M. A., Tischfield, J., Begleiter, H. & Reich, T., 2002, In: Alcohol Research and Health. 26, 3, p. 208-213 6 p.

    Research output: Contribution to journalArticlepeer-review

    70 Scopus citations
  • Defining cardiac functional recovery in end-stage heart failure at single-cell resolution

    Amrute, J. M., Lai, L., Ma, P., Koenig, A. L., Kamimoto, K., Bredemeyer, A., Shankar, T. S., Kuppe, C., Kadyrov, F. F., Schulte, L. J., Stoutenburg, D., Kopecky, B., Navankasattusas, S., Visker, J., Morris, S. A., Kramann, R., Leuschner, F., Mann, D. L., Drakos, S. G. & Lavine, K. J., Apr 2023, In: Nature Cardiovascular Research. 2, 4, p. 399-416 18 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    11 Scopus citations
  • Defining cellular identity through network biology

    Cahan, P., Morris, S. A., Collins, J. J. & Daley, G. Q., Nov 1 2014, In: Cell Cycle. 13, 21, p. 3313-3314 2 p., A1.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    7 Scopus citations
  • Defining hierarchical protein interaction networks from spectral analysis of bacterial proteomes

    Zaydman, M. A., Little, A. S., Haro, F., Aksianiuk, V., Buchser, W. J., Diantonio, A., Gordon, J. I., Milbrandt, J. & Raman, A. S., 2022, In: eLife. 11, e74104.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • Defining the role of common variation in the genomic and biological architecture of adult human height

    Wood, A. R., Esko, T., Yang, J., Vedantam, S., Pers, T. H., Gustafsson, S., Chu, A. Y., Estrada, K., Luan, J., Kutalik, Z., Amin, N., Buchkovich, M. L., Croteau-Chonka, D. C., Day, F. R., Duan, Y., Fall, T., Fehrmann, R., Ferreira, T., Jackson, A. U. & Karjalainen, J. & 425 others, Lo, K. S., Locke, A., Mägi, R., Mihailov, E., Porcu, E., Randall, J. C., Scherag, A., Vinkhuyzen, A. A. E., Westra, H. J., Winkler, T. W., Workalemahu, T., Zhao, J. H., Absher, D., Albrecht, E., Anderson, D., Baron, J., Beekman, M., Demirkan, A., Ehret, G. B., Feenstra, B., Feitosa, M. F., Fischer, K., Fraser, R. M., Goel, A., Gong, J., Justice, A. E., Kanoni, S., Kleber, M. E., Kristiansson, K., Lim, U., Lotay, V., Lui, J. C., Mangino, M., Leach, I. M., Medina-Gomez, C., Nalls, M. A., Nyholt, D. R., Palmer, C. D., Pasko, D., Pechlivanis, S., Prokopenko, I., Ried, J. S., Ripke, S., Shungin, D., Stancáková, A., Strawbridge, R. J., Sung, Y. J., Tanaka, T., Teumer, A., Trompet, S., Van Der Laan, S. 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J., Watkins, H., Wichmann, H. E., Wilson, J. F., Zanen, P., Deloukas, P., Heid, I. M., Lindgren, C. M., Mohlke, K. L., Speliotes, E. K., Thorsteinsdottir, U., Barroso, I., Fox, C. S., North, K. E., Strachan, D. P., Beckmann, J. S., Berndt, S. I., Boehnke, M., Borecki, I. B., McCarthy, M. I., Metspalu, A., Stefansson, K., Uitterlinden, A. G., Van Duijn, C. M., Franke, L., Willer, C. J., Price, A. L., Lettre, G., Loos, R. J. F., Weedon, M. N., Ingelsson, E., O'Connell, J. R., Abecasis, G. R., Chasman, D. I., Goddard, M. E., Visscher, P. M., Hirschhorn, J. N. & Frayling, T. M., Nov 5 2014, In: Nature Genetics. 46, 11, p. 1173-1186 14 p.

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    1330 Scopus citations
  • Definition of Phenotype

    Wojczynski, M. K. & Tiwari, H. K., 2008, Genetic Dissection of Complex Traits. Rao, D. C. & Gu, C. (eds.). p. 75-105 31 p. (Advances in Genetics; vol. 60).

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

    54 Scopus citations
  • Delayed grasping of a Müller-Lyer figure

    Djoussé, L., Pankow, J. S., Arnett, D. K., Zhang, Y., Hong, Y., Province, M. A. & Ellison, R. C., 2001, In: Experimental Brain Research. 141, 2, p. 166-173 8 p.

    Research output: Contribution to journalArticlepeer-review

    91 Scopus citations
  • Deletion of Rb1 induces both hyperproliferation and cell death in murine germinal center B cells

    He, Z., O'Neal, J., Wilson, W. C., Mahajan, N., Luo, J., Wang, Y., Su, M. Y., Lu, L., Skeath, J. B., Bhattacharya, D. & Tomasson, M. H., Mar 1 2016, In: Experimental Hematology. 44, 3, p. 161-165.e4

    Research output: Contribution to journalArticlepeer-review

    Open Access
    5 Scopus citations
  • Delila system tools

    Schneider, T. D., Stormo, G. D., Yarus, M. A. & Gold, L., Jan 11 1984, In: Nucleic acids research. 12, 1 PART1, p. 129-140 12 p.

    Research output: Contribution to journalArticlepeer-review

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    35 Scopus citations
  • Open Access
    40 Scopus citations
  • De novo genic mutations among a Chinese autism spectrum disorder cohort

    Wang, T., Guo, H., Xiong, B., Stessman, H. A. F., Wu, H., Coe, B. P., Turner, T. N., Liu, Y., Zhao, W., Hoekzema, K., Vives, L., Xia, L., Tang, M., Ou, J., Chen, B., Shen, Y., Xun, G., Long, M., Lin, J. & Kronenberg, Z. N. & 9 others, Peng, Y., Bai, T., Li, H., Ke, X., Hu, Z., Zhao, J., Zou, X., Xia, K. & Eichler, E. E., Nov 8 2016, In: Nature communications. 7, 13316.

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    Open Access
    259 Scopus citations
  • De novo missense variants in phosphatidylinositol kinase PIP5KIγ underlie a neurodevelopmental syndrome associated with altered phosphoinositide signaling

    Undiagnosed Diseases Network, Telethon Undiagnosed Diseases Program, Morleo, M., Venditti, R., Theodorou, E., Briere, L. C., Rosello, M., Tirozzi, A., Tammaro, R., Al-Badri, N., High, F. A., Shi, J., Acosta, M. T., Adam, M., Adams, D. R., Alvarez, R. L., Alvey, J., Amendola, L., Andrews, A. & Ashley, E. A. & 182 others, Bacino, C. A., Bademci, G., Balasubramanyam, A., Baldridge, D., Bale, J., Bamshad, M., Barbouth, D., Bayrak-Toydemir, P., Beck, A., Beggs, A. H., Behrens, E., Bejerano, G., Bellen, H. J., Bennett, J., Berg-Rood, B., Bernstein, J. A., Berry, G. T., Bican, A., Bivona, S., Blue, E., Bohnsack, J., Bonner, D., Botto, L., Boyd, B., Brown, G., Burke, E. A., Burrage, L. C., Butte, M. J., Byers, P., Byrd, W. E., Carey, J., Carrasquillo, O., Cassini, T., Chang, T. C. P., Chanprasert, S., Chao, H. T., Clark, G. D., Coakley, T. R., Cobban, L. A., Cogan, J. D., Coggins, M., Cole, F. S., Colley, H. A., Cooper, C. M., Cope, H., Corona, R., Craigen, W. J., Crouse, A. B., Cunningham, M., D'Souza, P., Dai, H., Dasari, S., Davis, J., Dayal, J. G., Dell'Angelica, E. C., Dipple, K., Doherty, D., Dorrani, N., Doss, A. L., Douine, E. D., Earl, D., Eckstein, D. J., Emrick, L. T., Eng, C. M., Falk, M., Fieg, E. L., Fisher, P. G., Fogel, B. L., Forghani, I., Gahl, W. A., Glass, I., Gochuico, B., Goddard, P. C., Godfrey, R. A., Golden-Grant, K., Grajewski, A., Hadley, D., Hahn, S., Halley, M. C., Hamid, R., Hassey, K., Hayes, N., High, F., Hing, A., Hisama, F. M., Holm, I. A., Hom, J., Horike-Pyne, M., Huang, A., Hutchison, S., Introne, W., Isasi, R., Izumi, K., Jamal, F., Jarvik, G. P., Jarvik, J., Jayadev, S., Jean-Marie, O., Jobanputra, V., Karaviti, L., Ketkar, S., Kiley, D., Kilich, G., Kobren, S. N., Kohane, I. S., Kohler, J. N., Korrick, S., Kozuira, M., Krakow, D., Krasnewich, D. M., Kravets, E., Lalani, S. R., Lam, B., Lam, C., Lanpher, B. C., Lanza, I. R., LeBlanc, K., Lee, B. H., Levitt, R., Lewis, R. A., Liu, P., Liu, X. Z., Longo, N., Loo, S. K., Loscalzo, J., Maas, R. L., Macnamara, E. F., MacRae, C. A., Maduro, V. V., Maghiro, A. S., Mahoney, R., Malicdan, M. C. V., Mamounas, L. A., Manolio, T. A., Mao, R., Maravilla, K., Marom, R., Marth, G., Martin, B. A., Martin, M. G., Martínez-Agosto, J. A., Marwaha, S., McCauley, J., McConkie-Rosell, A., McCray, A. T., McGee, E., Mefford, H., Merritt, J. L., Might, M., Mirzaa, G., Morava, E., Moretti, P., Mulvihill, J., Nakano-Okuno, M., Nelson, S. F., Newman, J. H., Nicholas, S. K., Nickerson, D., Nieves-Rodriguez, S., Novacic, D., Oglesbee, D., Orengo, J. P., Pace, L., Pak, S., Pallais, J. C., Palmer, C. G. S., Papp, J. C., Parker, N. H., Phillips, J. A., Posey, J. E., Potocki, L., Pusey Swerdzewski, B. N., Quinlan, A., Rao, D. A., Raper, A., Raskind, W., Renteria, G., Reuter, C. M., Schedl, T., Shin, J., Solnica-Krezel, L. & Wambach, J., Aug 3 2023, In: American journal of human genetics. 110, 8, p. 1377-1393 17 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    1 Scopus citations
  • De novo missense variants in ZBTB47 are associated with developmental delays, hypotonia, seizures, gait abnormalities, and variable movement abnormalities

    Undiagnosed Diseases Network, Ward, S. K., Wadley, A., Tsai, C. H., Benke, P. J., Emrick, L., Fisher, K., Houck, K. M., Dai, H., Acosta, M. T., Adam, M., Adams, D. R., Alvarez, R. L., Alvey, J., Amendola, L., Andrews, A., Ashley, E. A., Bacino, C. A., Bademci, G. & Balasubramanyam, A. & 181 others, Baldridge, D., Bale, J., Bamshad, M., Barbouth, D., Bayrak-Toydemir, P., Beck, A., Beggs, A. H., Behrens, E., Bejerano, G., Bellen, H. J., Bennett, J., Berg-Rood, B., Bernstein, J. A., Berry, G. T., Bican, A., Bivona, S., Blue, E., Bohnsack, J., Bonner, D., Botto, L., Boyd, B., Briere, L. C., Brown, G., Burke, E. A., Burrage, L. C., Butte, M. J., Byers, P., Byrd, W. E., Carey, J., Carrasquillo, O., Cassini, T., Chang, T. C. P., Chanprasert, S., Chao, H. T., Chinn, I., Clark, G. D., Coakley, T. R., Cobban, L. A., Cogan, J. D., Coggins, M., Cole, F. S., Colley, H. A., Cope, H., Corona, R., Craigen, W. J., Crouse, A. B., Cunningham, M., D'Souza, P., Dai, H., Dasari, S., Davis, J., Dayal, J. G., Dell'Angelica, E. C., Dickson, P., Dipple, K., Doherty, D., Dorrani, N., Doss, A. L., Douine, E. D., Earl, D., Eckstein, D. J., Emrick, L. T., Eng, C. M., Falk, M., Fieg, E. L., Fisher, P. G., Fogel, B. L., Forghani, I., Gahl, W. A., Glass, I., Gochuico, B., Goddard, P. C., Godfrey, R. A., Golden-Grant, K., Grajewski, A., Hadley, D., Hahn, S., Halley, M. C., Hamid, R., Hassey, K., Hayes, N., High, F., Hing, A., Hisama, F. M., Holm, I. A., Hom, J., Horike-Pyne, M., Huang, A., Hutchison, S., Introne, W., Isasi, R., Izumi, K., Jamal, F., Jarvik, G. P., Jarvik, J., Jayadev, S., Jean-Marie, O., Jobanputra, V., Karaviti, L., Ketkar, S., Kiley, D., Kilich, G., Kobren, S. N., Kohane, I. S., Kohler, J. N., Korrick, S., Kozuira, M., Krakow, D., Krasnewich, D. M., Kravets, E., Lalani, S. R., Lam, B., Lam, C., Lanpher, B. C., Lanza, I. R., LeBlanc, K., Lee, B. H., Levitt, R., Lewis, R. A., Liu, P., Liu, X. Z., Longo, N., Loo, S. K., Loscalzo, J., Maas, R. L., Macnamara, E. F., MacRae, C. A., Maduro, V. V., Maghiro, A. S., Mahoney, R., Malicdan, M. C. V., Mamounas, L. A., Manolio, T. A., Mao, R., Maravilla, K., Marom, R., Marth, G., Martin, B. A., Martin, M. G., Martínez-Agosto, J. A., Marwaha, S., McCauley, J., McConkie-Rosell, A., McCray, A. T., McGee, E., Mefford, H., Merritt, J. L., Might, M., Mirzaa, G., Morava, E., Moretti, P., Mulvihill, J., Nakano-Okuno, M., Nelson, S. F., Newman, J. H., Nicholas, S. K., Nickerson, D., Nieves-Rodriguez, S., Novacic, D., Oglesbee, D., Orengo, J. P., Pace, L., Pak, S., Pallais, J. C., Palmer, C. G. S., Papp, J. C., Parker, N. H., Phillips, J. A., Posey, J. E., Potocki, L., Pusey Swerdzewski, B. N., Quinlan, A., Rao, D. A., Raper, A., Raskind, W., Renteria, G., Reuter, C. M., Schedl, T., Shin, J., Solnica-Krezel, L. & Wambach, J., Jan 2024, In: American Journal of Medical Genetics, Part A. 194, 1, p. 17-30 14 p.

    Research output: Contribution to journalArticlepeer-review

  • De Novo Mutation in Genes Regulating Neural Stem Cell Fate in Human Congenital Hydrocephalus

    Furey, C. G., Choi, J., Jin, S. C., Zeng, X., Timberlake, A. T., Nelson-Williams, C., Mansuri, M. S., Lu, Q., Duran, D., Panchagnula, S., Allocco, A., Karimy, J. K., Khanna, A., Gaillard, J. R., DeSpenza, T., Antwi, P., Loring, E., Butler, W. E., Smith, E. R. & Warf, B. C. & 25 others, Strahle, J. M., Limbrick, D. D., Storm, P. B., Heuer, G., Jackson, E. M., Iskandar, B. J., Johnston, J. M., Tikhonova, I., Castaldi, C., López-Giráldez, F., Bjornson, R. D., Knight, J. R., Bilguvar, K., Mane, S., Alper, S. L., Haider, S., Guclu, B., Bayri, Y., Sahin, Y., Apuzzo, M. L. J., Duncan, C. C., DiLuna, M. L., Günel, M., Lifton, R. P. & Kahle, K. T., Jul 25 2018, In: Neuron. 99, 2, p. 302-314.e4

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    Open Access
    106 Scopus citations