Research output per year
Research output per year
- 1 - 50 out of 84 results
Search results
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2024
Capping protein regulators of actin assembly in budding yeast
Cooper, J. A., 2024, In: Journal of Cell Biology. 223, 1, e202312031.Research output: Contribution to journal › Comment/debate
Open Access -
Correction to: Structural basis of pH-dependent activation in a CLC transporter (Nature Structural & Molecular Biology, (2024), 31, 4, (644-656), 10.1038/s41594-023-01210-5)
Fortea, E., Lee, S., Chadda, R., Argyros, Y., Sandal, P., Mahoney-Kruszka, R., Ciftci, H. D., Falzone, M. E., Huysmans, G., Robertson, J. L., Boudker, O. & Accardi, A., Apr 2024, In: Nature Structural and Molecular Biology. 31, 4, p. 728 1 p.Research output: Contribution to journal › Comment/debate
Open Access -
Dissecting the biophysics and biology of intrinsically disordered proteins
Banerjee, P. R., Holehouse, A. S., Kriwacki, R., Robustelli, P., Jiang, H., Sobolevsky, A. I., Hurley, J. M. & Mendell, J. T., Feb 2024, In: Trends in biochemical sciences. 49, 2, p. 101-104 4 p.Research output: Contribution to journal › Comment/debate
1 Scopus citations -
Erratum: Correction: The pyruvate dehydrogenase complex regulates mitophagic trafficking and protein phosphorylation (Life science alliance (2023) 6 9 PII: e202402684)
Kolitsida, P., Nolic, V., Zhou, J., Stumpe, M., Niemi, N. M., Dengjel, J. & Abeliovich, H., Jun 1 2024, In: Life Science Alliance. 7, 6Research output: Contribution to journal › Comment/debate
Open Access -
Erratum: Loss of epigenetic information as a cause of mammalian aging (Cell (2023) 186(2) (305–326.e27), (S0092867422015707), (10.1016/j.cell.2022.12.027))
Yang, J. H., Hayano, M., Griffin, P. T., Amorim, J. A., Bonkowski, M. S., Apostolides, J. K., Salfati, E. L., Blanchette, M., Munding, E. M., Bhakta, M., Chew, Y. C., Guo, W., Yang, X., Maybury-Lewis, S., Tian, X., Ross, J. M., Coppotelli, G., Meer, M. V., Rogers-Hammond, R. & Vera, D. L. & 44 others, , Feb 29 2024, In: Cell. 187, 5, p. 1312-1313 2 p.Research output: Contribution to journal › Comment/debate
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Improving academic mentorship practices
Sarabipour, S., Macklin, P. & Niemi, N. M., Jul 2024, In: Nature Human Behaviour. 8, 7, p. 1228-1231 4 p.Research output: Contribution to journal › Comment/debate
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Survival of the Fittest: Clonal Selection of Somatic Mutations Reveals Targets to Abate Chronic Liver Injury
Niemi, N. M. & Debosch, B. J., May 2024, In: Gastroenterology. 166, 5, p. 936-937 2 p.Research output: Contribution to journal › Comment/debate
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2023
A nuclear basis for mechanointelligence in cells
Alisafaei, F., Moheimani, H., Elson, E. L. & Genin, G. M., May 9 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 19, e2303569120.Research output: Contribution to journal › Comment/debate
Open Access4 Scopus citations -
Author Correction: SARS-CoV-2 disrupts host epigenetic regulation via histone mimicry (Nature, (2022), 610, 7931, (381-388), 10.1038/s41586-022-05282-z)
Kee, J., Thudium, S., Renner, D. M., Glastad, K., Palozola, K., Zhang, Z., Li, Y., Lan, Y., Cesare, J., Poleshko, A., Kiseleva, A. A., Truitt, R., Cardenas-Diaz, F. L., Zhang, X., Xie, X., Kotton, D. N., Alysandratos, K. D., Epstein, J. A., Shi, P. Y. & Yang, W. & 5 others, , Feb 23 2023, In: Nature. 614, 7949, p. E44Research output: Contribution to journal › Comment/debate
Open Access -
Author Correction: Post-translational modifications of soluble α-synuclein regulate the amplification of pathological α-synuclein (Nature Neuroscience, (2023), 26, 2, (213-225), 10.1038/s41593-022-01239-7)
Zhang, S., Zhu, R., Pan, B., Xu, H., Olufemi, M. F., Gathagan, R. J., Li, Y., Zhang, L., Zhang, J., Xiang, W., Kagan, E. M., Cao, X., Yuan, C., Kim, S. J., Williams, C. K., Magaki, S., Vinters, H. V., Lashuel, H. A., Garcia, B. A. & James Petersson, E. & 3 others, , Dec 2023, In: Nature neuroscience. 26, 12, p. 2250 1 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
Corrigendum to: A rare human centenarian variant of SIRT6 enhances genome stability and interaction with Lamin A (The EMBO Journal, (2022), 41, 21, 10.15252/embj.2021110393)
Simon, M., Yang, J., Gigas, J., Earley, E. J., Hillpot, E., Zhang, L., Zagorulya, M., Tombline, G., Gilbert, M., Yuen, S. L., Pope, A., Van Meter, M., Emmrich, S., Firsanov, D., Athreya, A., Biashad, S. A., Han, J., Ryu, S., Tare, A. & Zhu, Y. & 11 others, , Feb 1 2023, In: EMBO Journal. 42, 3, e113326.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
Publisher Correction: SARS-CoV-2 disrupts host epigenetic regulation via histone mimicry (Nature, (2022), 610, 7931, (381-388), 10.1038/s41586-022-05282-z)
Kee, J., Thudium, S., Renner, D. M., Glastad, K., Palozola, K., Zhang, Z., Li, Y., Lan, Y., Cesare, J., Poleshko, A., Kiseleva, A. A., Truitt, R., Cardenas-Diaz, F. L., Zhang, X., Xie, X., Kotton, D. N., Alysandratos, K. D., Epstein, J. A., Shi, P. Y. & Yang, W. & 5 others, , Jan 26 2023, In: Nature. 613, 7945, p. E5Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
Stress granules offer first aid for leaky organelles
Plassmeyer, S. P. & Holehouse, A. S., Nov 30 2023, In: Nature. 623, 7989, p. 919-920 2 p.Research output: Contribution to journal › Comment/debate
1 Scopus citations -
Using graphs and charts in scientific figures
Buda, K., Cermakova, K., Hodges, H. C., Fornasiero, E. F., Sukenik, S. & Holehouse, A. S., Nov 2023, In: Trends in biochemical sciences. 48, 11, p. 913-916 4 p.Research output: Contribution to journal › Comment/debate
Open Access -
2022
Copper-Catalyzed Covalent Dimerization of Near-Infrared Fluorescent Cyanine Dyes: Synergistic Enhancement of Photoacoustic Signals for Molecular Imaging of Tumors
Maji, D., Oh, D., Gautam, K. S., Zhou, M., Zhang, H., Kao, J., Giblin, D., Smith, M., Lim, J., Lee, S., Kang, Y., Kim, W. J., Kim, C. & Achilefu, S., Jan 2022, In: Analysis and Sensing. 2, 1, e202100065.Research output: Contribution to journal › Comment/debate
Open Access6 Scopus citations -
Erratum: Microbes vs. chemistry in the origin of the anaerobic gut lumen (Proceedings of the National Academy of Sciences of the United States of America (2018) 115 (4170–4175) DOI: 10.1073/pnas.1718635115)
Friedman, E. S., Bittinger, K., Esipova, T. V., Hou, L., Chau, L., Jiang, J., Mesaros, C., Lund, P. J., Liang, X., FitzGerald, G. A., Goulian, M., Lee, D., Garcia, B. A., Blair, I. A., Vinogradov, S. A. & Wu, G. D., Jun 14 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 24, e2207826119.Research output: Contribution to journal › Comment/debate
Open Access -
Hyperphosphorylation tunes TDP-43 solubility
Ginell, G. M. & Holehouse, A. S., Apr 19 2022, In: EMBO Journal. 41, 8, e111062.Research output: Contribution to journal › Comment/debate
Open Access -
Intrinsically disordered CO2 sensors
Emenecker, R. J. & Holehouse, A. S., Jul 2022, In: Nature Cell Biology. 24, 7, p. 1013-1014 2 p.Research output: Contribution to journal › Comment/debate
1 Scopus citations -
2021
Author Correction: Long-term behavioral and cell-type-specific molecular effects of early life stress are mediated by H3K79me2 dynamics in medium spiny neurons (Nature Neuroscience, (2021), 24, 5, (667-676), 10.1038/s41593-021-00814-8)
Kronman, H., Torres-Berrío, A., Sidoli, S., Issler, O., Godino, A., Ramakrishnan, A., Mews, P., Lardner, C. K., Parise, E. M., Walker, D. M., van der Zee, Y. Y., Browne, C. J., Boyce, B. F., Neve, R., Garcia, B. A., Shen, L., Peña, C. J. & Nestler, E. J., May 2021, In: Nature neuroscience. 24, 5, p. 753-754 2 p.Research output: Contribution to journal › Comment/debate
Open Access4 Scopus citations -
Erratum: Publisher Correction: Cryo-EM structure of cortical microtubules from human parasite Toxoplasma gondii identifies their microtubule inner proteins (Nature communications (2021) 12 1 (3065))
Wang, X., Fu, Y., Beatty, W. L., Ma, M., Brown, A., Sibley, L. D. & Zhang, R., Jun 25 2021, In: Nature communications. 12, 1, p. 4076 1 p.Research output: Contribution to journal › Comment/debate
Open Access -
Mapping from sequence to droplets
Holehouse, A. S., Mar 2021, In: Nature Reviews Molecular Cell Biology. 22, 3, p. 163 1 p.Research output: Contribution to journal › Comment/debate
Open Access -
Memorial Viewpoint for Watt W. Webb: An Experimentalist's Experimentalist
Zipfel, W., Xu, C., Elson, E. & Maiti, S., Mar 25 2021, In: Journal of Physical Chemistry B. 125, 11, p. 2793-2795 3 p.Research output: Contribution to journal › Comment/debate
1 Scopus citations -
Targeting multiple enzymes in vitamin K metabolism for anticoagulation
Li, W., Mar 2021, In: Journal of Thrombosis and Haemostasis. 19, 3, p. 633-636 4 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
2020
Author Correction: An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer’s disease (Nature Genetics, (2020), 52, 10, (1024-1035), 10.1038/s41588-020-0696-0)
Nativio, R., Lan, Y., Donahue, G., Sidoli, S., Berson, A., Srinivasan, A. R., Shcherbakova, O., Amlie-Wolf, A., Nie, J., Cui, X., He, C., Wang, L. S., Garcia, B. A., Trojanowski, J. Q., Bonini, N. M. & Berger, S. L., Nov 1 2020, In: Nature Genetics. 52, 11, p. 1266 1 p.Research output: Contribution to journal › Comment/debate
Open Access5 Scopus citations -
Correction: Discovery of 6-Phenylhexanamide Derivatives as Potent Stereoselective Mitofusin Activators for the Treatment of Mitochondrial Diseases (Journal of Medicinal Chemistry (2020) 63:13 (7033−7051) DOI: 10.1021/acs.jmedchem.0c00366)
Dang, X., Zhang, L., Franco, A., Li, J., Rocha, A. G., Devanathan, S., Dolle, R. E., Bernstein, P. R. & Dorn, G. W., Sep 10 2020, In: Journal of Medicinal Chemistry. 63, 17, p. 10086 1 p.Research output: Contribution to journal › Comment/debate
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Primary Cilia: A Closer Look at the Antenna of Cells
Brown, A. & Zhang, R., Dec 21 2020, In: Current Biology. 30, 24, p. R1494-R1496Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
2019
Erratum: Pervasive H3K27 Acetylation Leads to ERV Expression and a Therapeutic Vulnerability in H3K27M Gliomas (Cancer Cell (2019) 35(5) (782–797.e8), (S1535610819301990), (10.1016/j.ccell.2019.04.004))
Krug, B., De Jay, N., Harutyunyan, A. S., Deshmukh, S., Marchione, D. M., Guilhamon, P., Bertrand, K. C., Mikael, L. G., McConechy, M. K., Chen, C. C. L., Khazaei, S., Koncar, R. F., Agnihotri, S., Faury, D., Ellezam, B., Weil, A. G., Ursini-Siegel, J., De Carvalho, D. D., Dirks, P. B. & Lewis, P. W. & 8 others, , Sep 16 2019, In: Cancer Cell. 36, 3, p. 338-339 2 p.Research output: Contribution to journal › Comment/debate
Open Access20 Scopus citations -
Interrogating the conformational dynamics of BetP transport
Robertson, J. L., Mar 1 2019, In: Journal of General Physiology. 151, 3, p. 279-281 3 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
Solution to the 50-year-old Okazaki-fragment problem
Burgers, P. M., Feb 26 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 9, p. 3358-3360 3 p.Research output: Contribution to journal › Comment/debate
Open Access5 Scopus citations -
2017
Erratum: Perinatal Licensing of Thermogenesis by IL-33 and ST2 (Cell (2016) 166(4) (841–854) (S009286741630811X) (10.1016/j.cell.2016.06.040))
Odegaard, J. I., Lee, M. W., Sogawa, Y., Bertholet, A. M., Locksley, R. M., Weinberg, D. E., Kirichok, Y., Deo, R. C. & Chawla, A., Dec 14 2017, In: Cell. 171, 7, p. 1707 1 p.Research output: Contribution to journal › Comment/debate
Open Access10 Scopus citations -
Erratum: Roles of H3K27me2 and H3K27me3 Examined during Fate Specification of Embryonic Stem Cells (Cell Reports (2016) 17(5) (1369–1382)(S2211124716313638)(10.1016/j.celrep.2016.09.087)
Juan, A. H., Wang, S., Ko, K. D., Zare, H., Tsai, P. F., Feng, X., Vivanco, K. O., Ascoli, A. M., Gutierrez-Cruz, G., Krebs, J., Sidoli, S., Knight, A. L., Pedersen, R. A., Garcia, B. A., Casellas, R., Zou, J. & Sartorelli, V., Jan 3 2017, In: Cell Reports. 18, 1, p. 297 1 p.Research output: Contribution to journal › Comment/debate
Open Access5 Scopus citations -
2016
Corrigendum to An Actin Filament Population Defined by the Tropomyosin Tpm3.1 Regulates Glucose Uptake [Traic, (2015), 16, 7, 691-711]
Kee, A. J., Yang, L., Lucas, C. A., Greenberg, M. J., Martel, N., Leong, G. M., Hughes, W. E., Cooney, G. J., James, D. E., Ostap, E. M., Han, W., Gunning, P. W. & Hardeman, E. C., Jan 1 2016, In: Traffic. 17, 1, p. 80-81 2 p.Research output: Contribution to journal › Comment/debate
Open Access4 Scopus citations -
2015
Erratum: Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways (Nature Chemistry (2014) 6:15-21)
Kohlhoff, K. J., Shukla, D., Lawrenz, M., Bowman, G. R., Konerding, D. E., Belov, D., Altman, R. B. & Pande, V. S., Aug 20 2015, In: Nature Chemistry. 7, 9, p. 759 1 p.Research output: Contribution to journal › Comment/debate
Open Access2 Scopus citations -
Properly reading the histone code by MS-based proteomics
Sidoli, S. & Garcia, B. A., Sep 1 2015, In: Proteomics. 15, 17, p. 2901-2902 2 p.Research output: Contribution to journal › Comment/debate
12 Scopus citations -
2014
Erratum: Capping protein regulators fine-tune actin assembly dynamics (Nature Reviews Molecular Cell Biology (2014) 15:(677-689)
Edwards, M., Zwolak, A., Schafer, D. A., Sept, D., Dominguez, R. & Cooper, J. A., Nov 27 2014, In: Nature Reviews Molecular Cell Biology. 15, 11, p. 760 1 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
Molecular biology: Protein binding cannot subdue a lively RNA
Hall, K. B., 2014, In: Nature. 506, 7488, p. 303-304 2 p.Research output: Contribution to journal › Comment/debate
Open Access2 Scopus citations -
Not so sweet malignant transformation
Baenziger, J. U., Sep 30 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 39, p. 14009-14010 2 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
2013
Erratum: MacroH2A histone variants act as a barrier upon reprogramming towards pluripotency (Nature Communications (2013) 4, (1565) DOI: 10.1038/ncomms2582)
Gaspar-Maia, A., Qadeer, Z. A., Hasson, D., Ratnakumar, K., Leu, N. A., Leroy, G., Liu, S., Costanzi, C., Valle-Garcia, D., Schaniel, C., Lemischka, I., Garcia, B., Pehrson, J. R. & Bernstein, E., 2013, In: Nature communications. 4, 2090.Research output: Contribution to journal › Comment/debate
Open Access -
Erratum: Dysregulation of PAD4-mediated citrullination of nuclear GSK3β activates TGF-β signaling and induces epithelialto-mesenchymal transition in breast cancer cells (Proceedings of the National Academy of Sciences of the United States of America (2013) 110 (11851-11856) DOI:10.1073/pnas.1308362110)
Stadler, S. C., Vincent, C. T., Fedorov, V. D., Patsialou, A., Cherrington, B. D., Wakshlag, J. J., Mohanan, S., Zee, B. M., Zhang, X., Garcia, B. A., Condeelis, J. S., Brown, A. M. C., Coonrod, S. A. & Allis, C. D., Oct 1 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 40, p. 16283 1 p.Research output: Contribution to journal › Comment/debate
Open Access -
Erratum: Charge interactions can dominate the dimensions of intrinsically disordered proteins (Proceedings of the National Academy of Sciences of the United States of America (2010) 107 (14609-14614) DOI:10.1073/pnas.1001743107)
Müller-Späth, S., Soranno, A., Hirschfeld, V., Hofmann, H., Rüegger, S., Reymond, L., Nettels, D. & Schuler, B., Oct 8 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 41, p. 16693 1 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
Erratum: Branched tricarboxylic acid metabolism in Plasmodium falciparum (Nature (2010) 466 (774-778) DOI: 10.1038/nature09301)
Olszewski, K. L., Mather, M. W., Morrisey, J. M., Garcia, B. A., Vaidya, A. B., Rabinowitz, J. D. & Llinás, M., May 30 2013, In: Nature. 497, 7451, p. 652 1 p.Research output: Contribution to journal › Comment/debate
Open Access8 Scopus citations -
O-mannosylation of cadherins
Baenziger, J. U., Dec 24 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 52, p. 20858-20859 2 p.Research output: Contribution to journal › Comment/debate
Open Access4 Scopus citations -
RNA does the folding dance of twist, turn, stack
Hall, K. B., Oct 15 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 42, p. 16706-16707 2 p.Research output: Contribution to journal › Comment/debate
5 Scopus citations -
2012
Erratum: Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding (J. Mol. Biol. (2011) 411/3 (633-648))
Jia, H., Korolev, S., Niedziela-Majka, A., Maluf, N. K., Gauss, G. H., Myong, S., Ha, T., Waksman, G. & Lohman, T. M., May 4 2012, In: Journal of Molecular Biology. 418, 3-4, p. 264-265 2 p.Research output: Contribution to journal › Comment/debate
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Erratum: Structural differences between apoE3 and apoE4 may be useful in developing therapeutic agents for Alzheimer's disease (Proceedings of the National Academy of Sciences of the United States of America (2012) 109, (8913-8918) DOI: 10.1073/pnas.1207022109)
Frieden, C. & Garai, K., Aug 7 2012, In: Proceedings of the National Academy of Sciences of the United States of America. 109, 32, p. 13130 1 p.Research output: Contribution to journal › Comment/debate
Open Access -
Moving the O-glycoproteome from form to function
Baenziger, J. U., Jun 19 2012, In: Proceedings of the National Academy of Sciences of the United States of America. 109, 25, p. 9672-9673 2 p.Research output: Contribution to journal › Comment/debate
Open Access4 Scopus citations -
2011
Erratum: SSB functions as a sliding platform that migrates on DNA via reptation (Cell (2011) 146 (222-232))
Zhou, R., Kozlov, A. G., Roy, R., Zhang, J., Korolev, S., Lohman, T. M. & Ha, T., Aug 5 2011, In: Cell. 146, 3, p. 485 1 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations -
Erratum: Structure of a Slow CLC Cl-/H+ antiporter from a cyanobacterium (Biochemistry (2011) 50 (788) DOI: 10.1021/bi1019258)
Jayaram, H., Robertson, J. L., Wu, F., Williams, C. & Miller, C., May 17 2011, In: Biochemistry. 50, 19, p. 4228 1 p.Research output: Contribution to journal › Comment/debate
1 Scopus citations -
Erratum: A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells (Nature Chemical Biology (2011) 7 (401-404))
Vedadi, M., Barsyte-Lovejoy, D., Liu, F., Rival-Gervier, S., Allali-Hassani, A., Labrie, V., Wigle, T. J., Dimaggio, P. A., Wasney, G. A., Siarheyeva, A., Dong, A., Tempel, W., Wang, S. C., Chen, X., Chau, I., Mangano, T. J., Huang, X. P., Simpson, C. D., Pattenden, S. G. & Norris, J. L. & 12 others, , Sep 2011, In: Nature Chemical Biology. 7, 9, p. 648 1 p.Research output: Contribution to journal › Comment/debate
Open Access2 Scopus citations -
Erratum: Branched tricarboxylic acid metabolism in Plasmodium falciparum (Nature (2010) 466 (774-778))
Olszewski, K. L., Mather, M. W., Morrisey, J. M., Garcia, B. A., Vaidya, A. B., Rabinowitz, J. D. & Llinás, M., Jan 20 2011, In: Nature. 469, 7330, p. 432 1 p.Research output: Contribution to journal › Comment/debate
Open Access1 Scopus citations